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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000004.1:426766..428550- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_46827-T1 ID=ASPNIDRAFT_46827-T1|Name=ASPNIDRAFT_46827-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1785bp|location=Sequence derived from alignment at ACJE01000004.1:426766..428550- (Aspergillus niger ATCC 1015)
ATGCTGAAGCCCCAACAAACACCTTTTAGAGATATAGTCTCCCTCGACGG
GATTTGGAAGTTTGCTCTCGGTTCCAGCGATAATGAGACGGCGACACCCT
GGACAGCTCCATTAGCCACCGATCTGGAGTGTCCCGTTCCAGCCTCTTGT
AACGACATCTTTGTCGATCGTCAGATCCATGACCATGTCGGATGGGTTTA
CTACCAGCGCCAAGCTATTGTCCCCAGAGGCTGGTCACAGCAGCAATATC
TCGTGTGGGTTGATGCCGCCACACACAAAGGTCGTATCTATATAAACGAC
CATCTAGTCGCCGAGCATGTGGGCGGCTACACACCTTTTGAAGCAGATAT
CACGAGTCTTGTCTCTGCTGGTGACAGCTTCCGACTGACTATCGCTGTCA
ATAACGTGCTGACTCACGAGACTATTCCGCCAGGCAGGATAGAAGTATTG
GAATACACAGGTAAAAAGACGCAAGTCTACCAGCATGATTTCTTCAATTA
CGCGGGACTTGCGCGCTCCGTCTCGCTGTATTCTGTTCCGAAGCAGCACA
TCCAGGAAATCAAAGTCGTCACGGACGTGAACGGCGCAACCGGGCAGATA
AAATACCTCGTCACGGTGACCAACGCGACTACAGAGCGCATCAAGATCGA
CGTGGTCGATGAGGACGGCAGAACTGTGGCCGAAGCTTCAGGTACTCATG
GTAATGTTACAATAGACTCTGTCAGGCTGTGGCAGCCGGGAGATGCATAT
CTGTATCAATTTCGGGCGAGCATCGTGGGCTTGGACGACAGTATACTTGA
CACTTATAGTGTTGCGACGGGCGTACGTACAGTCAAAGTCAGCGGTAACA
AATTCCTCATCAACGACAAGCCGTTCTACTTCACCGGCTTTGGGAAGCAC
GAGGACAGCAATGTGCGCGGCAAAGGCTATGACGCAGCGTACATGGTGCA
CGATTTCCAGTTGATGAATTGGATGGGAGCCAACTCATTCCGCACCTCGC
ATTATCCGTACGCCGAAGAGGTCATGGAATTTGCGGACCGGCACGGAATC
GTTGTCATTGACGAGACGCCCGCCGTTGGCCTGGCGTACTCCATTGGGGC
TGGAGTTTCTAGCGAAGACAGCCCACAGACATTTACCCCGGAAGGGATCA
ACAATAACACCCGCGAAGCTCACAAGCAAGCAATCCGGGAGCTCATTGCT
CGGGATAAGAACCACGCCAGTGTTGTCATGTGGTCGATTGCAAATGAGCC
TGCATCACAAGAAGCAGGAGCCCGTGAGTATTTCACGCCACTCGTTGACC
TGGCCCACGAGCTTGACTCAGATCGCCCCATCTGTTTTGCAAATTACGGA
GACGCCACATATGAGGTGGATCGAATCTCGGATATGTTTGACGTCCTCTG
CCTCAACCGCTATTTCGGGTGGTATTCGCAAACCGGTGAGATTGAGGAGG
CGGAAGCGGCTCTCGAAACAGAGCTATTGGGCTGGGAGGGCAAATACGAC
AAACCCATCGTCATGACAGAATACGGGGCGGATACCTTGGCTGGCCTCCA
TTCGGTGCTTGGGCTTCCGTGGAGCGAGGAGTTCCAGGTCGAACTGCTCG
ACATGTACCATCGAGTGTTTGACCGTGTCGAATCAGTGGTGGGAGAGCAC
GTTTGGAACTTTGCGGACTTTCAGGCGGTCGTAGGGGTCGGCAGGGTGGA
CGGGAACAAGAAGGGGGTCTTTACCAGGGATAGGAAACCAAAGGCTGCAG
TTCAGACTCTGAGAAGTCGATGGAGTCAATTGTAG back to topCoding sequence (CDS) from alignment at ACJE01000004.1:426766..428550- >ASPNIDRAFT_46827-T1 ID=ASPNIDRAFT_46827-T1|Name=ASPNIDRAFT_46827-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1785bp|location=Sequence derived from alignment at ACJE01000004.1:426766..428550- (Aspergillus niger ATCC 1015)
ATGCTGAAGCCCCAACAAACACCTTTTAGAGATATAGTCTCCCTCGACGG
GATTTGGAAGTTTGCTCTCGGTTCCAGCGATAATGAGACGGCGACACCCT
GGACAGCTCCATTAGCCACCGATCTGGAGTGTCCCGTTCCAGCCTCTTGT
AACGACATCTTTGTCGATCGTCAGATCCATGACCATGTCGGATGGGTTTA
CTACCAGCGCCAAGCTATTGTCCCCAGAGGCTGGTCACAGCAGCAATATC
TCGTGTGGGTTGATGCCGCCACACACAAAGGTCGTATCTATATAAACGAC
CATCTAGTCGCCGAGCATGTGGGCGGCTACACACCTTTTGAAGCAGATAT
CACGAGTCTTGTCTCTGCTGGTGACAGCTTCCGACTGACTATCGCTGTCA
ATAACGTGCTGACTCACGAGACTATTCCGCCAGGCAGGATAGAAGTATTG
GAATACACAGGTAAAAAGACGCAAGTCTACCAGCATGATTTCTTCAATTA
CGCGGGACTTGCGCGCTCCGTCTCGCTGTATTCTGTTCCGAAGCAGCACA
TCCAGGAAATCAAAGTCGTCACGGACGTGAACGGCGCAACCGGGCAGATA
AAATACCTCGTCACGGTGACCAACGCGACTACAGAGCGCATCAAGATCGA
CGTGGTCGATGAGGACGGCAGAACTGTGGCCGAAGCTTCAGGTACTCATG
GTAATGTTACAATAGACTCTGTCAGGCTGTGGCAGCCGGGAGATGCATAT
CTGTATCAATTTCGGGCGAGCATCGTGGGCTTGGACGACAGTATACTTGA
CACTTATAGTGTTGCGACGGGCGTACGTACAGTCAAAGTCAGCGGTAACA
AATTCCTCATCAACGACAAGCCGTTCTACTTCACCGGCTTTGGGAAGCAC
GAGGACAGCAATGTGCGCGGCAAAGGCTATGACGCAGCGTACATGGTGCA
CGATTTCCAGTTGATGAATTGGATGGGAGCCAACTCATTCCGCACCTCGC
ATTATCCGTACGCCGAAGAGGTCATGGAATTTGCGGACCGGCACGGAATC
GTTGTCATTGACGAGACGCCCGCCGTTGGCCTGGCGTACTCCATTGGGGC
TGGAGTTTCTAGCGAAGACAGCCCACAGACATTTACCCCGGAAGGGATCA
ACAATAACACCCGCGAAGCTCACAAGCAAGCAATCCGGGAGCTCATTGCT
CGGGATAAGAACCACGCCAGTGTTGTCATGTGGTCGATTGCAAATGAGCC
TGCATCACAAGAAGCAGGAGCCCGTGAGTATTTCACGCCACTCGTTGACC
TGGCCCACGAGCTTGACTCAGATCGCCCCATCTGTTTTGCAAATTACGGA
GACGCCACATATGAGGTGGATCGAATCTCGGATATGTTTGACGTCCTCTG
CCTCAACCGCTATTTCGGGTGGTATTCGCAAACCGGTGAGATTGAGGAGG
CGGAAGCGGCTCTCGAAACAGAGCTATTGGGCTGGGAGGGCAAATACGAC
AAACCCATCGTCATGACAGAATACGGGGCGGATACCTTGGCTGGCCTCCA
TTCGGTGCTTGGGCTTCCGTGGAGCGAGGAGTTCCAGGTCGAACTGCTCG
ACATGTACCATCGAGTGTTTGACCGTGTCGAATCAGTGGTGGGAGAGCAC
GTTTGGAACTTTGCGGACTTTCAGGCGGTCGTAGGGGTCGGCAGGGTGGA
CGGGAACAAGAAGGGGGTCTTTACCAGGGATAGGAAACCAAAGGCTGCAG
TTCAGACTCTGAGAAGTCGATGGAGTCAATTGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004553 | hydrolase activity, hydrolyzing O-glycosyl compounds |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000041.1 |
| Note | CAZy:GH2 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR036156 |
| DBxref | InterPro:IPR023232 |
| DBxref | InterPro:IPR023230 |
| DBxref | InterPro:IPR008979 |
| DBxref | InterPro:IPR006103 |
| DBxref | InterPro:IPR013783 |
| DBxref | InterPro:IPR006104 |
| DBxref | InterPro:IPR006102 |
| DBxref | InterPro:IPR006101 |
| DBxref | PFAM:PF02837 |
| DBxref | PFAM:PF02836 |
| DBxref | PFAM:PF00703 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000004.1 | supercontig | ACJE01000004.1:426766..428550 - |
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