You are here

Home

ASPNIDRAFT_47141-T1, ASPNIDRAFT_47141-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47141-T1
Unique NameASPNIDRAFT_47141-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3059989..3061329+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47141-T1 ID=ASPNIDRAFT_47141-T1|Name=ASPNIDRAFT_47141-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1341bp|location=Sequence derived from alignment at ACJE01000010.1:3059989..3061329+ (Aspergillus niger ATCC 1015)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:3059989..3061329+

>ASPNIDRAFT_47141-T1 ID=ASPNIDRAFT_47141-T1|Name=ASPNIDRAFT_47141-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1341bp|location=Sequence derived from alignment at ACJE01000010.1:3059989..3061329+ (Aspergillus niger ATCC 1015)
ATGGCCTCTCTAACTACTCCTCCCCGCGTCCCCATCCCCGCCAACGGGGT
CGACTACCGTGGCAAAGTAGTCCTGGCCCCTATGGTGCGCTCCGGCGAAT
TGCCCTCCCGCCTCATTGCCCTCAAGTATGGCGCCGATCTAGTTTGGGGC
CCTGAAACTATCGACCGGGCTATGGCAGGCGCCATCCGCCGTGTGAACCC
CCGCAACGGCACCATCGAATTCACCCGCATGCCCTCCAACGGCGGCCGCA
CCGAAAAGGCAGGCCAAGAATCCGTGATCTACCGTCTCGACCCCGTCCGC
GAGAAAGGCAAACTCATTTATCAAATTGGCACTGCGACGCCTGAAATCGC
CGTCCAAGCAGCCAAACTCGTCGCGGGCGATGTCGCCGGTATCGACGTGA
ACTCGGGATGTCCGAAACCCTTTAGCACGAGCGGTGGTATGGGTGCGGCG
CTTCTCAAGACACCGGATAAGTTGGTTGCGATTCTGGAAGCCCTGGTGAA
GGAGGTCGGGACGCCATTCCAGATCGGTATCTCGGTCAAGATCCGCATTT
TGAAAGATCCCGAGGAGACGAGAGCTCTGGTGTCGCGGCTCGTGAAGACA
GGCATTACGGGCTTGACAGTGCATTGTCGGACGCCGCCCATGAGGCCGCG
TGAACGCGCTATCCGTGATCAGGTGCGCATGATTGCCGACATCTGTCATG
AGGCTGGTGTCGCATGCGTTATAAACGGTGATGTAACCTCCAAAGATGAG
GGACACGCCTTGATGAAAGAGTTCGGCGTCGACGGCGCGATGATCGCCAC
AGCCGCAGAAGCAAACCCATCCTGCTTCCGTACCGAAGCCGAGGGCGGCC
TTCTCCCCTGGAAGGAGGTAGTCCACGAATATATCAAGTTCTGCCTCGAG
TCTGAGAACCGCTTCGGCAACTCCAAATATCTCCTCAACATCCTCGTCCC
CGGCAAGCTCCAGGAAGGCAAGCTTGCAAAGGCAGCCAGGTCCTATGCCG
ATACATGCCACGCCCTCGGATTCGAGGATCTCCTTCCCCTCGCCATGCAA
GTGGACGACATCCTCAACCTCACCGACAAGTCAGTCACTACCAAAGACCT
CCAGTCCGAACACACCCGCAGCAAGGCCGTTCAGAACGCCATGGAGAACA
ACGAATCCGCGCGGGCTGCTGGCGGTGCTTCTCGCGTCAAGTCCACCTCC
CCCGCAGTCAGCGCAGGCGGCCCCATTCGCACGAACTCCATCCCAGCTCC
TACGAAGACCAAGGCTGAGGCGGAGACCCAGGCCGATGTCTCTGTTCCGG
CTCCCGAAGCTGCGCCTCAGAAGCAGGAGCTGACAGCTTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0050660flavin adenine dinucleotide binding
GO:0017150tRNA dihydrouridine synthase activity
Vocabulary: Biological Process
TermDefinition
GO:0008033tRNA processing
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47141ASPNIDRAFT_47141Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47141-T1.exon1ASPNIDRAFT_47141-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47141-T1.cdsASPNIDRAFT_47141-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47141-T1ASPNIDRAFT_47141-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092628FW
DBxrefInterPro:IPR035587
DBxrefInterPro:IPR018517
DBxrefInterPro:IPR013785
DBxrefInterPro:IPR001269
DBxrefPFAM:PF01207
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3059989..3061329 +
Powered by Drupal