You are here

Home

ASPNIDRAFT_47491-T1, ASPNIDRAFT_47491-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_47491-T1
Unique NameASPNIDRAFT_47491-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1401184..1401726+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_47491-T1 ID=ASPNIDRAFT_47491-T1|Name=ASPNIDRAFT_47491-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=543bp|location=Sequence derived from alignment at ACJE01000021.1:1401184..1401726+ (Aspergillus niger ATCC 1015)
ATGTCGTTCACTCCTCCTTCAGAAATTTCCGTGACCTCTCGTCAGATCCC
CAAATGGGGTGGCATCCCCAACACCTCGATCCAGTCTAAGCCACTCCTGA
TCTACCACAAAGCTTTTAACGCGTCCGCTAGCGATCTCGCGACGCACCTG
GAAGAAATTGGCGAGGTCAGACCACAGTGGGTCTATTCCATGTACAGTCA
AACGCACTTCCACAGCACCACTCACGAGGTACTGGGTGTGGTTTCCGGCC
GTGCACGGCTTTGCTTCGGTGGGGAAGCGAACCCCGAACGCTTTGAGCCG
ACCGTCGAAAAAGGAGATCTGATTATCGTGCCCGCCGGCGTCGGCCACCG
GCTGCTGGAGGAGCTCGGCTCTGACCAGGGTGACCCTTTCCAGATGGTTG
GCGCTTATCCGCCCCAGAAACAATGGGACATGTGCTATGGTGACTCAAGG
GAGGAAGACAAGGTTTCCCGGAATATCCATGCCTTGAGTTGGTTCCACAG
CGACCCCTTGTGTGGGCAGGATGGGCCGGTGCTGCACGTCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:1401184..1401726+

>ASPNIDRAFT_47491-T1 ID=ASPNIDRAFT_47491-T1|Name=ASPNIDRAFT_47491-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=543bp|location=Sequence derived from alignment at ACJE01000021.1:1401184..1401726+ (Aspergillus niger ATCC 1015)
ATGTCGTTCACTCCTCCTTCAGAAATTTCCGTGACCTCTCGTCAGATCCC
CAAATGGGGTGGCATCCCCAACACCTCGATCCAGTCTAAGCCACTCCTGA
TCTACCACAAAGCTTTTAACGCGTCCGCTAGCGATCTCGCGACGCACCTG
GAAGAAATTGGCGAGGTCAGACCACAGTGGGTCTATTCCATGTACAGTCA
AACGCACTTCCACAGCACCACTCACGAGGTACTGGGTGTGGTTTCCGGCC
GTGCACGGCTTTGCTTCGGTGGGGAAGCGAACCCCGAACGCTTTGAGCCG
ACCGTCGAAAAAGGAGATCTGATTATCGTGCCCGCCGGCGTCGGCCACCG
GCTGCTGGAGGAGCTCGGCTCTGACCAGGGTGACCCTTTCCAGATGGTTG
GCGCTTATCCGCCCCAGAAACAATGGGACATGTGCTATGGTGACTCAAGG
GAGGAAGACAAGGTTTCCCGGAATATCCATGCCTTGAGTTGGTTCCACAG
CGACCCCTTGTGTGGGCAGGATGGGCCGGTGCTGCACGTCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47491ASPNIDRAFT_47491Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47491-T1.exon1ASPNIDRAFT_47491-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47491-T1.cdsASPNIDRAFT_47491-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_47491-T1ASPNIDRAFT_47491-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR011051
DBxrefInterPro:IPR013096
DBxrefInterPro:IPR014500
DBxrefInterPro:IPR014710
DBxrefPFAM:PF07883
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1401184..1401726 +
Powered by Drupal