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ASPNIDRAFT_48560-T1, ASPNIDRAFT_48560-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_48560-T1
Unique NameASPNIDRAFT_48560-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000009.1:112890..113656-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_48560-T1 ID=ASPNIDRAFT_48560-T1|Name=ASPNIDRAFT_48560-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=767bp|location=Sequence derived from alignment at ACJE01000009.1:112890..113656- (Aspergillus niger ATCC 1015)
ATGACTCTCAAGCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGT
GCGCACCGCCCTAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCG
ACCTGGCCCAGGGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAG
CCGTTTGGCAAGGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGAT
CTATGGTTGGTGTTACGAGAAATCAATTCCAGACATACCCTAACAACACT
CCTTCTATGAACAGAAAGTCGCGCCATCGCTCAATACATTGCTACCAAGT
ACCGCGGCCAGGGCACTGACTTGGCTCCTCCTGAGTCGGATCTGAAGGCC
TTTGCCTATTATCAGCAGGTACTTCTACCTTTCCCTAAAAAAAGCTACAC
AATCTCCGTACCGAAACTAATGGGATAGGCTCTCTCCATCGAGCAATCCT
ACTTCGACCCCCTCGTTTCCCAAATCGCCTACGAAAAGGTCTTCAAAGCC
CGCAAGGGTCACGGCCAGACCGACGAAGCCCGCGTGCAATCCCTCTTCTC
CCAACTGGAGCTCACCCTTGAAGGTTACGAGCGGGTCTTGTCGAAGCAGC
CCTACCTAGCCGGGCAGCAGCTTACACTGGCGGATTTGGCTCATTTGCCG
TACGGAGTCTTCATTGAGCAATTTGGATTCACGGATGTGGTGAGCAAGTT
CCCGCATGTGCAGAAGTGGTGGGAGGGATTGAAGGCTAGGGAGAGTTGGA
AGAAGGTCACGGCGTAA
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Coding sequence (CDS) from alignment at ACJE01000009.1:112890..113656-

>ASPNIDRAFT_48560-T1 ID=ASPNIDRAFT_48560-T1|Name=ASPNIDRAFT_48560-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1944bp|location=Sequence derived from alignment at ACJE01000009.1:112890..113656- (Aspergillus niger ATCC 1015)
GCTCTCTCCATCGAGCAATCCTACTTCGACCCCCTCGTTTCCCAAATCGC
CTACGAAAAGGTCTTCAAAGCCCGCAAGGGTCACGGCCAGACCGACGAAG
CCCGCGTGCAATCCCTCTTCTCCCAACTGGAGCTCACCCTTGAAGGTTAC
GAGCGGGTCTTGTCGAAGCAGCCCTACCTAGCCGGGCAGCAGCTTACACT
GGCGGATTTGGCTCATTTGCCGTACGGAGTCTTCATTGAGCAATTTGGAT
TCACGGATGTGGTGAGCAAGTTCCCGCATGTGCAGAAGTGGTGGGAGGGA
TTGAAGGCTAGGGAGAGTTGGAAGAAGGTCACGGCGTAAAAAGTCGCGCC
ATCGCTCAATACATTGCTACCAAGTACCGCGGCCAGGGCACTGACTTGGC
TCCTCCTGAGTCGGATCTGAAGGCCTTTGCCTATTATCAGCAGATGACTC
TCAAGCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGTGCGCACC
GCCCTAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCGACCTGGC
CCAGGGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAGCCGTTTG
GCAAGGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGATCTATGGC
TCTCTCCATCGAGCAATCCTACTTCGACCCCCTCGTTTCCCAAATCGCCT
ACGAAAAGGTCTTCAAAGCCCGCAAGGGTCACGGCCAGACCGACGAAGCC
CGCGTGCAATCCCTCTTCTCCCAACTGGAGCTCACCCTTGAAGGTTACGA
GCGGGTCTTGTCGAAGCAGCCCTACCTAGCCGGGCAGCAGCTTACACTGG
CGGATTTGGCTCATTTGCCGTACGGAGTCTTCATTGAGCAATTTGGATTC
ACGGATGTGGTGAGCAAGTTCCCGCATGTGCAGAAGTGGTGGGAGGGATT
GAAGGCTAGGGAGAGTTGGAAGAAGGTCACGGCGTAAAAAGTCGCGCCAT
CGCTCAATACATTGCTACCAAGTACCGCGGCCAGGGCACTGACTTGGCTC
CTCCTGAGTCGGATCTGAAGGCCTTTGCCTATTATCAGCAGATGACTCTC
AAGCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGTGCGCACCGC
CCTAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCGACCTGGCCC
AGGGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAGCCGTTTGGC
AAGGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGATCTATGGCTC
TCTCCATCGAGCAATCCTACTTCGACCCCCTCGTTTCCCAAATCGCCTAC
GAAAAGGTCTTCAAAGCCCGCAAGGGTCACGGCCAGACCGACGAAGCCCG
CGTGCAATCCCTCTTCTCCCAACTGGAGCTCACCCTTGAAGGTTACGAGC
GGGTCTTGTCGAAGCAGCCCTACCTAGCCGGGCAGCAGCTTACACTGGCG
GATTTGGCTCATTTGCCGTACGGAGTCTTCATTGAGCAATTTGGATTCAC
GGATGTGGTGAGCAAGTTCCCGCATGTGCAGAAGTGGTGGGAGGGATTGA
AGGCTAGGGAGAGTTGGAAGAAGGTCACGGCGTAAAAAGTCGCGCCATCG
CTCAATACATTGCTACCAAGTACCGCGGCCAGGGCACTGACTTGGCTCCT
CCTGAGTCGGATCTGAAGGCCTTTGCCTATTATCAGCAGATGACTCTCAA
GCTGTACGGCTTCGTTCACTCCACCTGCACCCGTCGTGTGCGCACCGCCC
TAGCCGAGAAAGGGCTGGACGTGGAAATCGTCCCCGTCGACCTGGCCCAG
GGCGAGCAGAAGACCTCCTCTTATCTGAACGATCTTCAGCCGTTTGGCAA
GGTGCCCGTGCTGCAGGATACTGAGACTGGCATCCAGATCTATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48560ASPNIDRAFT_48560Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48560-T1ASPNIDRAFT_48560-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48560-T1.cdsASPNIDRAFT_48560-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48560-T1.exon3ASPNIDRAFT_48560-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48560-T1.exon2ASPNIDRAFT_48560-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48560-T1.exon1ASPNIDRAFT_48560-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR004046
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000009.1supercontigACJE01000009.1:112890..113656 -
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