You are here

Home

ASPNIDRAFT_48606-T1, ASPNIDRAFT_48606-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_48606-T1
Unique NameASPNIDRAFT_48606-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:165975..166729+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_48606-T1 ID=ASPNIDRAFT_48606-T1|Name=ASPNIDRAFT_48606-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=755bp|location=Sequence derived from alignment at ACJE01000008.1:165975..166729+ (Aspergillus niger ATCC 1015)
ATGGACGTCTCTAACAACCGTCTTTTTCGCTGGTCCAAGCCCGAATGGCT
TAACAACTCCGCCGTGCGCAACGCAGGCGTGTACACCTCCGGCGCACTGG
TAAGCTCCCATCGTCACCATCACCACCACCATCAAGCAACGCAACCACTC
ACATGGCAGTAGTTCTCCCTGGGTTTCTTCTTTCTCATCGACGCCGCCGC
TTTCTCCCACAGCGCTCGTAACGGCTCCTTCGTGCACGTCAAATTCGTCG
ACTGGATCCCCGGCATCTGCTCCGCGCTGGGAATGCTCGTTATCAATTCG
ATCGAGAAGTCGCGTCTTCATGCCGATAGCTTCAGTTATAGTGGGAGTGG
GGTTGCGTGGAAGGCGAGGTTTGTGCTGTTCTTGGGATTTGCGTTGCTCG
CGGGTGGATTGGCTGGGAGTGTGGTCAGTATTCACCTACATATAATTCCT
TCCCTTGTTACCCTCTTATCTGTTGTTTAGGGTATCGGGGTCGCCGGAGT
AGAGTGGTTAGGCTAACACATGGCAATATAGACGGTCATGGTACTCAAAT
ACCTGGTCCAGGGGTATCCCCTTCCGACACTCTACTTTGGTATTGCGAAT
GTTATTGCAAATGGACTGGTTATGCTGAGGTGTGTATTCCGTAGGAAAAC
ACAAGCAGGAACATATTTACTAATGAACTTTGCGATTGCAGCACCATCGT
CCTATGGATCTCCCAGAATATAGAAGACGATTACACCTATAACCTTGCTC
TGTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:165975..166729+

>ASPNIDRAFT_48606-T1 ID=ASPNIDRAFT_48606-T1|Name=ASPNIDRAFT_48606-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2088bp|location=Sequence derived from alignment at ACJE01000008.1:165975..166729+ (Aspergillus niger ATCC 1015)
ATGGACGTCTCTAACAACCGTCTTTTTCGCTGGTCCAAGCCCGAATGGCT
TAACAACTCCGCCGTGCGCAACGCAGGCGTGTACACCTCCGGCGCACTGT
TCTCCCTGGGTTTCTTCTTTCTCATCGACGCCGCCGCTTTCTCCCACAGC
GCTCGTAACGGCTCCTTCGTGCACGTCAAATTCGTCGACTGGATCCCCGG
CATCTGCTCCGCGCTGGGAATGCTCGTTATCAATTCGATCGAGAAGTCGC
GTCTTCATGCCGATAGCTTCAGTTATAGTGGGAGTGGGGTTGCGTGGAAG
GCGAGGTTTGTGCTGTTCTTGGGATTTGCGTTGCTCGCGGGTGGATTGGC
TGGGAGTGTGACGGTCATGGTACTCAAATACCTGGTCCAGGGGTATCCCC
TTCCGACACTCTACTTTGGTATTGCGAATGTTATTGCAAATGGACTGGTT
ATGCTGAGCACCATCGTCCTATGGATCTCCCAGAATATAGAAGACGATTA
CACCTATAACCTTGCTCTGTGAATGGACGTCTCTAACAACCGTCTTTTTC
GCTGGTCCAAGCCCGAATGGCTTAACAACTCCGCCGTGCGCAACGCAGGC
GTGTACACCTCCGGCGCACTGTTCTCCCTGGGTTTCTTCTTTCTCATCGA
CGCCGCCGCTTTCTCCCACAGCGCTCGTAACGGCTCCTTCGTGCACGTCA
AATTCGTCGACTGGATCCCCGGCATCTGCTCCGCGCTGGGAATGCTCGTT
ATCAATTCGATCGAGAAGTCGCGTCTTCATGCCGATAGCTTCAGTTATAG
TGGGAGTGGGGTTGCGTGGAAGGCGAGGTTTGTGCTGTTCTTGGGATTTG
CGTTGCTCGCGGGTGGATTGGCTGGGAGTGTGACGGTCATGGTACTCAAA
TACCTGGTCCAGGGGTATCCCCTTCCGACACTCTACTTTGGTATTGCGAA
TGTTATTGCAAATGGACTGGTTATGCTGAGCACCATCGTCCTATGGATCT
CCCAGAATATAGAAGACGATTACACCTATAACCTTGCTCTGTGAATGGAC
GTCTCTAACAACCGTCTTTTTCGCTGGTCCAAGCCCGAATGGCTTAACAA
CTCCGCCGTGCGCAACGCAGGCGTGTACACCTCCGGCGCACTGTTCTCCC
TGGGTTTCTTCTTTCTCATCGACGCCGCCGCTTTCTCCCACAGCGCTCGT
AACGGCTCCTTCGTGCACGTCAAATTCGTCGACTGGATCCCCGGCATCTG
CTCCGCGCTGGGAATGCTCGTTATCAATTCGATCGAGAAGTCGCGTCTTC
ATGCCGATAGCTTCAGTTATAGTGGGAGTGGGGTTGCGTGGAAGGCGAGG
TTTGTGCTGTTCTTGGGATTTGCGTTGCTCGCGGGTGGATTGGCTGGGAG
TGTGACGGTCATGGTACTCAAATACCTGGTCCAGGGGTATCCCCTTCCGA
CACTCTACTTTGGTATTGCGAATGTTATTGCAAATGGACTGGTTATGCTG
AGCACCATCGTCCTATGGATCTCCCAGAATATAGAAGACGATTACACCTA
TAACCTTGCTCTGTGAATGGACGTCTCTAACAACCGTCTTTTTCGCTGGT
CCAAGCCCGAATGGCTTAACAACTCCGCCGTGCGCAACGCAGGCGTGTAC
ACCTCCGGCGCACTGTTCTCCCTGGGTTTCTTCTTTCTCATCGACGCCGC
CGCTTTCTCCCACAGCGCTCGTAACGGCTCCTTCGTGCACGTCAAATTCG
TCGACTGGATCCCCGGCATCTGCTCCGCGCTGGGAATGCTCGTTATCAAT
TCGATCGAGAAGTCGCGTCTTCATGCCGATAGCTTCAGTTATAGTGGGAG
TGGGGTTGCGTGGAAGGCGAGGTTTGTGCTGTTCTTGGGATTTGCGTTGC
TCGCGGGTGGATTGGCTGGGAGTGTGACGGTCATGGTACTCAAATACCTG
GTCCAGGGGTATCCCCTTCCGACACTCTACTTTGGTATTGCGAATGTTAT
TGCAAATGGACTGGTTATGCTGAGCACCATCGTCCTATGGATCTCCCAGA
ATATAGAAGACGATTACACCTATAACCTTGCTCTGTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48606ASPNIDRAFT_48606Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48606-T1.exon1ASPNIDRAFT_48606-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48606-T1.exon2ASPNIDRAFT_48606-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48606-T1.exon3ASPNIDRAFT_48606-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48606-T1.exon4ASPNIDRAFT_48606-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48606-T1.cdsASPNIDRAFT_48606-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48606-T1ASPNIDRAFT_48606-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG092654VM
DBxrefInterPro:IPR007919
DBxrefPFAM:PF05255
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:165975..166729 +
Powered by Drupal