You are here

Home

ASPNIDRAFT_48775-T1, ASPNIDRAFT_48775-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_48775-T1
Unique NameASPNIDRAFT_48775-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000008.1:1110639..1111804+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_48775-T1 ID=ASPNIDRAFT_48775-T1|Name=ASPNIDRAFT_48775-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1166bp|location=Sequence derived from alignment at ACJE01000008.1:1110639..1111804+ (Aspergillus niger ATCC 1015)
ATGTCCAACCCCTCGTGCCTCCTCTACGGCGCCCACGACGCCCGCTACGA
AGACCGACCCATCCCCACCATCACTTCCCCAACAGATGTAATAATCCGCA
TTGCCTACACAGGCGTCTGCGGCAGCGACGTACCCCTCCCTCTTTCCCCT
ATATCTCCCAATTCTACCAACCCACTCAACCCCCTAACCAAAGAAACCAG
GTCCACTTCTACCACCACGGCGGCATCCACCGCCCCATAACCCCCTCCAA
CCCGATAACAATGGGCCATGAATCCACCGGCATCATCCACGCCATCGGCC
CGGCCGTAACCACCCTCTCCCCAGGCGACCCCGTAGCCCTCGAACCCGGT
TACGCATGCCACCGCTGTAATCTTTGCAAATCCGGACGGTATAATCTGTG
CCGGGAGATGAAGTTCGCCGCGGTCCCTGGCATATGTCACGGCACCCTCA
CGCGGTTCTTCAAGTTACCTGCTGATTACTGCTACCGGATTCCGGAGGGG
ACATTAGGATTGGATGAGGCGACGCTGTTGGAGCCGTTGGGGGTGGCGGT
GCGGTCTGTGAGGGAGGTGGGGGTAAAGCCTGGGATGAGGGTGGTGGTTT
TTGGGGCGGGGACTGTCGGGGTGTTGTGTATGGCCGTGGCGAGGGAGTTT
GGGGCGAGCAGGGTTGTTGGGGTGGATTTGAGTGAGAGGAAGTTGGAGTT
TGCGGAAAGTGTGGTTGGGAAGAGGGTTTGGGGGGGTGGGTTTGTTCCAT
CAGGAGATGCGGAGGATGGAAGGAGGTTGGTGGAGGGATTTTGTGGGAGT
GATGATGATGAGGCAGGGTTCGATGTTGTTATTGAGGCTACGGGGGCAGA
GGCTTGTATTAACTTGGGCATAGAGGTGGTGAAGGTTGGAGGGGCGTTTA
TGCAGACGGGGCTGGGGAGGAAGAATGTGAGTTTTCCCATTGGAACGGTG
GTTGCGAAGGAGGTTGTCGTTAAGGGGTGTTTTCGGTATGGGCCGGGGGA
TTACAAGCTCGGGATGCAGATGGCTGTGGAGGGGAGGATTCCGCTGAAGA
GGTTTATTACCAAGGTGGTAGGTTTTGAGGATGCCGTTGAGGCGTGGGAG
ACTACGGCTAGGGGGGAAGGGATTAAGACGTTGATCAGAGGGGTGGATAC
GCCGGTGGAAGTGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000008.1:1110639..1111804+

>ASPNIDRAFT_48775-T1 ID=ASPNIDRAFT_48775-T1|Name=ASPNIDRAFT_48775-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2190bp|location=Sequence derived from alignment at ACJE01000008.1:1110639..1111804+ (Aspergillus niger ATCC 1015)
ATGTCCAACCCCTCGTGCCTCCTCTACGGCGCCCACGACGCCCGCTACGA
AGACCGACCCATCCCCACCATCACTTCCCCAACAGATGTAATAATCCGCA
TTGCCTACACAGGCGTCTGCGGCAGCGACGTCCACTTCTACCACCACGGC
GGCATCCACCGCCCCATAACCCCCTCCAACCCGATAACAATGGGCCATGA
ATCCACCGGCATCATCCACGCCATCGGCCCGGCCGTAACCACCCTCTCCC
CAGGCGACCCCGTAGCCCTCGAACCCGGTTACGCATGCCACCGCTGTAAT
CTTTGCAAATCCGGACGGTATAATCTGTGCCGGGAGATGAAGTTCGCCGC
GGTCCCTGGCATATGTCACGGCACCCTCACGCGGTTCTTCAAGTTACCTG
CTGATTACTGCTACCGGATTCCGGAGGGGACATTAGGATTGGATGAGGCG
ACGCTGTTGGAGCCGTTGGGGGTGGCGGTGCGGTCTGTGAGGGAGGTGGG
GGTAAAGCCTGGGATGAGGGTGGTGGTTTTTGGGGCGGGGACTGTCGGGG
TGTTGTGTATGGCCGTGGCGAGGGAGTTTGGGGCGAGCAGGGTTGTTGGG
GTGGATTTGAGTGAGAGGAAGTTGGAGTTTGCGGAAAGTGTGGTTGGGAA
GAGGGTTTGGGGGGGTGGGTTTGTTCCATCAGGAGATGCGGAGGATGGAA
GGAGGTTGGTGGAGGGATTTTGTGGGAGTGATGATGATGAGGCAGGGTTC
GATGTTGTTATTGAGGCTACGGGGGCAGAGGCTTGTATTAACTTGGGCAT
AGAGGTGGTGAAGGTTGGAGGGGCGTTTATGCAGACGGGGCTGGGGAGGA
AGAATGTGAGTTTTCCCATTGGAACGGTGGTTGCGAAGGAGGTTGTCGTT
AAGGGGTGTTTTCGGTATGGGCCGGGGGATTACAAGCTCGGGATGCAGAT
GGCTGTGGAGGGGAGGATTCCGCTGAAGAGGTTTATTACCAAGGTGGTAG
GTTTTGAGGATGCCGTTGAGGCGTGGGAGACTACGGCTAGGGGGGAAGGG
ATTAAGACGTTGATCAGAGGGGTGGATACGCCGGTGGAAGTGTAGATGTC
CAACCCCTCGTGCCTCCTCTACGGCGCCCACGACGCCCGCTACGAAGACC
GACCCATCCCCACCATCACTTCCCCAACAGATGTAATAATCCGCATTGCC
TACACAGGCGTCTGCGGCAGCGACGTCCACTTCTACCACCACGGCGGCAT
CCACCGCCCCATAACCCCCTCCAACCCGATAACAATGGGCCATGAATCCA
CCGGCATCATCCACGCCATCGGCCCGGCCGTAACCACCCTCTCCCCAGGC
GACCCCGTAGCCCTCGAACCCGGTTACGCATGCCACCGCTGTAATCTTTG
CAAATCCGGACGGTATAATCTGTGCCGGGAGATGAAGTTCGCCGCGGTCC
CTGGCATATGTCACGGCACCCTCACGCGGTTCTTCAAGTTACCTGCTGAT
TACTGCTACCGGATTCCGGAGGGGACATTAGGATTGGATGAGGCGACGCT
GTTGGAGCCGTTGGGGGTGGCGGTGCGGTCTGTGAGGGAGGTGGGGGTAA
AGCCTGGGATGAGGGTGGTGGTTTTTGGGGCGGGGACTGTCGGGGTGTTG
TGTATGGCCGTGGCGAGGGAGTTTGGGGCGAGCAGGGTTGTTGGGGTGGA
TTTGAGTGAGAGGAAGTTGGAGTTTGCGGAAAGTGTGGTTGGGAAGAGGG
TTTGGGGGGGTGGGTTTGTTCCATCAGGAGATGCGGAGGATGGAAGGAGG
TTGGTGGAGGGATTTTGTGGGAGTGATGATGATGAGGCAGGGTTCGATGT
TGTTATTGAGGCTACGGGGGCAGAGGCTTGTATTAACTTGGGCATAGAGG
TGGTGAAGGTTGGAGGGGCGTTTATGCAGACGGGGCTGGGGAGGAAGAAT
GTGAGTTTTCCCATTGGAACGGTGGTTGCGAAGGAGGTTGTCGTTAAGGG
GTGTTTTCGGTATGGGCCGGGGGATTACAAGCTCGGGATGCAGATGGCTG
TGGAGGGGAGGATTCCGCTGAAGAGGTTTATTACCAAGGTGGTAGGTTTT
GAGGATGCCGTTGAGGCGTGGGAGACTACGGCTAGGGGGGAAGGGATTAA
GACGTTGATCAGAGGGGTGGATACGCCGGTGGAAGTGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008270zinc ion binding
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48775ASPNIDRAFT_48775Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48775-T1.exon1ASPNIDRAFT_48775-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_48775-T1.exon2ASPNIDRAFT_48775-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48775-T1.cdsASPNIDRAFT_48775-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_48775-T1ASPNIDRAFT_48775-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011032
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR002328
DBxrefInterPro:IPR013149
DBxrefInterPro:IPR013154
DBxrefPFAM:PF00107
DBxrefPFAM:PF08240
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000008.1supercontigACJE01000008.1:1110639..1111804 +
Powered by Drupal