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ASPNIDRAFT_49450-T1, ASPNIDRAFT_49450-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_49450-T1
Unique NameASPNIDRAFT_49450-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1537040..1537582+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_49450-T1 ID=ASPNIDRAFT_49450-T1|Name=ASPNIDRAFT_49450-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=543bp|location=Sequence derived from alignment at ACJE01000002.1:1537040..1537582+ (Aspergillus niger ATCC 1015)
ATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCA
CCCCTCCTCCGCCGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAA
CAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCAC
GGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAA
GTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGTAT
GTTTCAATACCTTATTTTTTCCCCCGCTATAAATGAGGGGTTGTTCTTGG
GTAGGATAATGGCTAATTTTGGTTATGTGGCGTTTAGGGCGTGGGTATTA
GAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGGTAGGTTT
TCTTCTTTTCTTATGGACTATGGAGAAGGGGTAAAAGGAAAAAGGTGCTA
ATTGTGGTTGTTGATGTGGCTGCAGATTACACGATCTATGAACAGGTTGT
CAATGCTACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGA
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Coding sequence (CDS) from alignment at ACJE01000002.1:1537040..1537582+

>ASPNIDRAFT_49450-T1 ID=ASPNIDRAFT_49450-T1|Name=ASPNIDRAFT_49450-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1107bp|location=Sequence derived from alignment at ACJE01000002.1:1537040..1537582+ (Aspergillus niger ATCC 1015)
ATGTCCCTCCAAACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCA
CCCCTCCTCCGCCGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAA
CAGTGACTGCTCTGCGCGGCGACACGGCGACTATGACGTGCGGAAACCAC
GGCGATGTGACGCTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAA
GTTGGTGGAGATTATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGGCG
TGGGTATTAGAGTCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGC
GATTACACGATCTATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCC
TATCTTTTATGATGAGTGAATGTCCCTCCAAACCCCCCGCATCCTCCCCT
CCCACCTCCACGCCTTCCACCCCTCCTCCGCCGGCCCACGCACATCCCAT
ACCGTCCGTATCCTAGGAACAGTGACTGCTCTGCGCGGCGACACGGCGAC
TATGACGTGCGGAAACCACGGCGATGTGACGCTCATCTTGAAGCCCGATT
CGCATTTGCAGATGGGCAAGTTGGTGGAGATTATTGGGAAGGTGGCGGAT
CTGGATAATGGGAGTGGCGTGGGTATTAGAGTCCTGGGAAGTACGGATTG
GGGGAGTCCCGCGGATTGCGATTACACGATCTATGAACAGGTTGTCAATG
CTACGCATAAGCTCAAGCCTATCTTTTATGATGAGTGAATGTCCCTCCAA
ACCCCCCGCATCCTCCCCTCCCACCTCCACGCCTTCCACCCCTCCTCCGC
CGGCCCACGCACATCCCATACCGTCCGTATCCTAGGAACAGTGACTGCTC
TGCGCGGCGACACGGCGACTATGACGTGCGGAAACCACGGCGATGTGACG
CTCATCTTGAAGCCCGATTCGCATTTGCAGATGGGCAAGTTGGTGGAGAT
TATTGGGAAGGTGGCGGATCTGGATAATGGGAGTGGCGTGGGTATTAGAG
TCCTGGGAAGTACGGATTGGGGGAGTCCCGCGGATTGCGATTACACGATC
TATGAACAGGTTGTCAATGCTACGCATAAGCTCAAGCCTATCTTTTATGA
TGAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Vocabulary: Biological Process
TermDefinition
GO:0006281DNA repair
GO:0006260DNA replication
GO:0006310DNA recombination
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49450ASPNIDRAFT_49450Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49450-T1.exon1ASPNIDRAFT_49450-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49450-T1.exon2ASPNIDRAFT_49450-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49450-T1.exon3ASPNIDRAFT_49450-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49450-T1.cdsASPNIDRAFT_49450-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49450-T1ASPNIDRAFT_49450-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR012340
DBxrefInterPro:IPR013970
DBxrefPFAM:PF08661
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1537040..1537582 +
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