You are here

Home

ASPNIDRAFT_49692-T1, ASPNIDRAFT_49692-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_49692-T1
Unique NameASPNIDRAFT_49692-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000006.1:433506..434785-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_49692-T1 ID=ASPNIDRAFT_49692-T1|Name=ASPNIDRAFT_49692-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1280bp|location=Sequence derived from alignment at ACJE01000006.1:433506..434785- (Aspergillus niger ATCC 1015)
ATGGCGCACTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGA
GCGCGATCTTCTCAAGTCAAGCTGGGGCACCAAACGCGGAGTCATCGGCC
GCGACTCTTTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCG
CGGGAACCCGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGA
ATGCGCCATTAGTGACCTTCTCGCCCAGCGACAGGAAATCAAGCGTCTCG
AAAAGGAACGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGG
GCATTAGATGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAG
CATGGGGTTAGATGCAGCAGCGAAGAAGAACAACGGGTCAAGCCAATCAC
AGAATGATGAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTG
GCTGCTTTCAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGT
GTTTGAATTAGATGATAAAGAGATGGCTAGGATCGCGCGCGAGGAGCAAG
AACGGTTGAAAAATGAGCTGAAGAAGGAAAAGGTCTAAGACCATTGTCAA
TCCCCTTGGTAAGCAGCTCGCTGACAATCTCCAGGAATCAAACAAATCAG
CCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAAC
GAAATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTC
CACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGC
ATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCA
AGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTGTATGTTTTA
CCTACTTACCCACCGCATATGTCCTCAACGCACCTACTAATACTGTGCTG
CTACATCAAGTAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGT
CAACAAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAG
AAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTT
TGCGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTC
GGGGAAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGG
AGGTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCG
ACTAAGTCGGGGGTTGCGTTTCAGTGTTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000006.1:433506..434785-

>ASPNIDRAFT_49692-T1 ID=ASPNIDRAFT_49692-T1|Name=ASPNIDRAFT_49692-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3474bp|location=Sequence derived from alignment at ACJE01000006.1:433506..434785- (Aspergillus niger ATCC 1015)
TAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCAACAAATTC
ATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAGAAGAGCAGGA
GCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTTTGCGAGACGG
ATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGGGGAAGAAG
AAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAGGTGAGCTC
GGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCGACTAAGTCGG
GGGTTGCGTTTCAGTGTTGAGAATCAAACAAATCAGCCCTCCCATCCTTC
TGGGTCCCCTCGCTCACACCCACCACCGACCCGAACGAAATCGCCGCCAA
CAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTCCACCGACTCCAACC
GCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCATTTCACCGAAGAA
AAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAGCTGCAAGAAAAC
ACTGACAAATGGGCTCAAAGCAATGTATGGCGCACTCTAAACGCAACACC
TCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAGTCAAGCTG
GGGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCCATTCGGCT
CGTGTCGACTTTGCCTACACCCGGCGCGGGAACCCGTCGTCGCCTGCGCC
ACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGACCTTCTCGC
CCAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGAAGCCAAAA
AGCGTCTTGCAGAGGAGGAGGAGCGGGCATTAGATGAAGCGCGAACGCGG
GAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCAGCAGCGAA
GAAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTCAAAGAAAC
GCAAAGCAGATACCACAGAGGCATTGGCTGCTTTCAAGGCGCGAGAGGTA
GAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGATAAAGAGAT
GGCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGAGCTGAAGA
AGGAAAAGTAACGAAACCCTGCGGCCACGTCATCTGCCAACCATGCGTCA
ACAAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCTCCAAAGAA
GAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGCTATGTTTG
CGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTCCGGTTCGG
GGAAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTTTGGTGGAG
GTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAATGTCGCGAC
TAAGTCGGGGGTTGCGTTTCAGTGTTGAGAATCAAACAAATCAGCCCTCC
CATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGAACGAAATC
GCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCTTCCACCGA
CTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGTGCATTTCA
CCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCCCAAGCTGC
AAGAAAACACTGACAAATGGGCTCAAAGCAATGTATGGCGCACTCTAAAC
GCAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATCTTCTCAAG
TCAAGCTGGGGCACCAAACGCGGAGTCATCGGCCGCGACTCTTTCCTCCC
ATTCGGCTCGTGTCGACTTTGCCTACACCCGGCGCGGGAACCCGTCGTCG
CCTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCATTAGTGAC
CTTCTCGCCCAGCGACAGGAAATCAAGCGTCTCGAAAAGGAACGCGATGA
AGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGGGCATTAGATGAAGCGC
GAACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGTTAGATGCA
GCAGCGAAGAAGAACAACGGGTCAAGCCAATCACAGAATGATGAGAGCTC
AAAGAAACGCAAAGCAGATACCACAGAGGCATTGGCTGCTTTCAAGGCGC
GAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAATTAGATGAT
AAAGAGATGGCTAGGATCGCGCGCGAGGAGCAAGAACGGTTGAAAAATGA
GCTGAAGAAGGAAAAGTAACGAAACCCTGCGGCCACGTCATCTGCCAACC
ATGCGTCAACAAATTCATGACTCCGCACGATGCGCCGGACCCGCACGCCT
CCAAAGAAGAGCAGGAGCAGACCGCTGCCCTGCATGGACGGATTCTATGC
TATGTTTGCGAGACGGATGTCACGCCGTCAAAGGACAGTAACAAGGATTC
CGGTTCGGGGAAGAAGAAAAAGAAGGACAAGGAGGGGATTCGCCCTGGTT
TGGTGGAGGTGAGCTCGGAGGGGACAGGGTTTGCGGGGAGAGGGGGGAAT
GTCGCGACTAAGTCGGGGGTTGCGTTTCAGTGTTGAGAATCAAACAAATC
AGCCCTCCCATCCTTCTGGGTCCCCTCGCTCACACCCACCACCGACCCGA
ACGAAATCGCCGCCAACAAAGCCATTAAACTAACCCCCATTTGTCCCGCT
TCCACCGACTCCAACCGCCACAGCTACTCCCTCAAATCCTTAGTTGAGGT
GCATTTCACCGAAGAAAAGGCCTCCGATGGCTCCCCGGCCCGTGTCTGCC
CAAGCTGCAAGAAAACACTGACAAATGGGCTCAAAGCAATGTATGGCGCA
CTCTAAACGCAACACCTCCCTTCCTCATTTTACCTCCTACGAGCGCGATC
TTCTCAAGTCAAGCTGGGGCACCAAACGCGGAGTCATCGGCCGCGACTCT
TTCCTCCCATTCGGCTCGTGTCGACTTTGCCTACACCCGGCGCGGGAACC
CGTCGTCGCCTGCGCCACCAACGGTGATCTCTTCTGTCGCGAATGCGCCA
TTAGTGACCTTCTCGCCCAGCGACAGGAAATCAAGCGTCTCGAAAAGGAA
CGCGATGAAGCCAAAAAGCGTCTTGCAGAGGAGGAGGAGCGGGCATTAGA
TGAAGCGCGAACGCGGGAACTCCGTGATTTCGAACTCGTGAGCATGGGGT
TAGATGCAGCAGCGAAGAAGAACAACGGGTCAAGCCAATCACAGAATGAT
GAGAGCTCAAAGAAACGCAAAGCAGATACCACAGAGGCATTGGCTGCTTT
CAAGGCGCGAGAGGTAGAGGTGGACGGGAAGCGGAAGAAGGTGTTTGAAT
TAGATGATAAAGAGATGGCTAGGATCGCGCGCGAGGAGCAAGAACGGTTG
AAAAATGAGCTGAAGAAGGAAAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49692ASPNIDRAFT_49692Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49692-T1ASPNIDRAFT_49692-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49692-T1.cdsASPNIDRAFT_49692-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_49692-T1.exon3ASPNIDRAFT_49692-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49692-T1.exon2ASPNIDRAFT_49692-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_49692-T1.exon1ASPNIDRAFT_49692-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR001841
DBxrefInterPro:IPR017907
DBxrefInterPro:IPR027370
DBxrefInterPro:IPR013083
DBxrefPFAM:PF13445
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000006.1supercontigACJE01000006.1:433506..434785 -
Powered by Drupal