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ASPNIDRAFT_50161-T1, ASPNIDRAFT_50161-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_50161-T1
Unique NameASPNIDRAFT_50161-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000001.1:774921..776639-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_50161-T1 ID=ASPNIDRAFT_50161-T1|Name=ASPNIDRAFT_50161-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1719bp|location=Sequence derived from alignment at ACJE01000001.1:774921..776639- (Aspergillus niger ATCC 1015)
ATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGG
GTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCT
CTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACT
GCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGAC
CAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTG
CTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTA
GTGAGTTTACCATTTAGATGCATCATCACGCTTTGATTACTGATTCAGTC
TAGGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGAC
CACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGG
CGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGC
AACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGC
CGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCAT
CGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTT
GCTGGTGAAACCGTAAGTCATATCCTTCCTATATTAGGGCCAACCGCCAT
ACTAACGGAGAGTCCGACAGACCTTCGGTGACACCTACGACAGCGACTTC
GACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGG
ACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCA
ACGGCGGACAGGACAAGTACGAGCCTACCACCACAGCCCTTTCATGAAGA
ACCCTACTCATAGCTCCTACCAGGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGGTTAGTCCATCCTATCTTAACCA
TCAACATCTTATTATTCTAACCACCGAGCAAATACAGGTCTACAACGTCA
AGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATC
CAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGT
CAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACG
GCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTC
TTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCC
CTCTTCGGGATGCCCTTAA
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Coding sequence (CDS) from alignment at ACJE01000001.1:774921..776639-

>ASPNIDRAFT_50161-T1 ID=ASPNIDRAFT_50161-T1|Name=ASPNIDRAFT_50161-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7455bp|location=Sequence derived from alignment at ACJE01000001.1:774921..776639- (Aspergillus niger ATCC 1015)
GTCTACAACGTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTA
CGGCATCGACATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACC
CGACCAACGGCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGT
ACTATGAGCGACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTG
CTCTAACTTTGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATA
GCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATTGT
CGTCAAGGACATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACT
GGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCC
GGCCTGATCCTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGA
CGGCGACCCGGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCG
ACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTT
GCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGG
TGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCG
TCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGC
TGCCGCATCAAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGACAC
CTACGACAGCGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCA
TCACCGGTGAGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGG
GACGGCGAGGGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTGTT
GCAGCCACTCGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGT
TCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTG
TCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACA
GTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACAT
CCTCCTGTCCAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGG
GTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTGAAACCATGATGAAG
CGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAG
CGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCG
CCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACT
GGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCT
CTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTT
CCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGTCTACAAC
GTCAAGTACGAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGA
CATCCAGCAGGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACG
GCGTCAAGATCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGC
GACGGCAAGGATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTT
TGTCTTCACTGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACT
ACCCCTCTTCGGGATGCCCTTAAGCCCGACCACTTCATTGTCGTCAAGGA
CATGTACAACTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCC
ACTGCTTCGAGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATC
CTCAACAACACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCC
GGCCGCCCACAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGA
CCCTCTCCAACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACC
AGCGGTAGCTCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGG
TCTCTCCATCGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCG
TCACCTTCTCCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATC
AAGTCTAATGCTGATACCACTGGCGAGACCTTCGGTGACACCTACGACAG
CGACTTCGACCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTG
AGGAGGGACATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAG
GGATCCAACGGCGGACAGGACAAGGCAAGGCACCTGCTGTTGCAGCCACT
CGCACCTCGGCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCC
CCTGTCCACCTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGG
CGCAGAGCTCCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAG
TACGCTTCGATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTC
CAACATCAACGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGA
CCGGTGCGGCTGTCATCTTTGCTGGTGAAACCATGATGAAGCGCAGCGCG
CTCCTTGCCTCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGAC
TCACTCCTGTGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCT
TCTGCGCCACCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCG
GATGTCTTCCTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGC
CTGCAGCTGCCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGG
CTGCCCCGGCAGTCTCCAGCAGCAGCAAGGTAGTCTACAACGTCAAGTAC
GAAAACATCACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCA
GGACTACGAGAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGA
TCGAGAACATCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAG
GATTACTACATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCAC
TGATGTCGACATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTT
CGGGATGCCCTTAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAA
CTCCAAGATCGAGAACCTCAACATCCTGAACTGGCCCGTCCACTGCTTCG
AGATCGAGAACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAAC
ACCGCCGGTGACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCA
CAACACCGACGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCTCTCCA
ACTCCTGGGTGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGC
TCGATCGTCGTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCAT
CGGCTCCATCGGCGGCAAGAGCAACAACACCGTCGACGGCGTCACCTTCT
CCAACTCCCAGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAAT
GCTGATACCACTGGCGAGACCTTCGGTGACACCTACGACAGCGACTTCGA
CCCCATTGTCATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGAC
ATGTCATCAACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAAC
GGCGGACAGGACAAGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCG
GCGATCCCGACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCAC
CTCGGCAGCGGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCT
CCGTGGCAGGCAACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCG
ATCTCCTCTGCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAA
CGCCCCTGCATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGG
CTGTCATCTTTGCTGGTGAAACCATGATGAAGCGCAGCGCGCTCCTTGCC
TCTTTCCTTCCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTG
TGCCTCTGCCTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCA
CCTTCACGGCGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTC
CTTTCCAACTGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTG
CCTGGGCACCGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGG
CAGTCTCCAGCAGCAGCAAGGTAGTCTACAACGTCAAGTACGAAAACATC
ACTCTGTCCGGCATCAGCGACTACGGCATCGACATCCAGCAGGACTACGA
GAACGGTGGTGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACA
TCTCTTTCGTCAATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTAC
ATCCTCTGTGGTGATGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGA
CATCACCGGTGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCC
CTTAAGCCCGACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGAT
CGAGAACCTCAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGA
ACACCGAGTACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGT
GACGCCGCCAACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGA
CGGCTTCGACATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGG
TGCACAACCAGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTC
GTCGACAACCTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCAT
CGGCGGCAAGAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCC
AGGTCATTAACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACC
ACTGGCGAGACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGT
CATCTCCGGTACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCA
ACGGTAACGGTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAG
GACAAGGCAAGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCG
ACCACTTTCCACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGC
GGCGGCTGTGACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAG
GCAACGGAGGCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCT
GCCGTCGCATCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGC
ATCGAGCACCATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCT
TTGCTGGTGAAACCATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTT
CCTCTCGCCCTGGGGTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGC
CTTTTCCGTCTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGG
CGAGCACCGTGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAAC
TGTGACTACAAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCAC
CGCCGATGGATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCA
GCAGCAGCAAGGTAGTCTACAACGTCAAGTACGAAAACATCACTCTGTCC
GGCATCAGCGACTACGGCATCGACATCCAGCAGGACTACGAGAACGGTGG
TGCTACCGGTGACCCGACCAACGGCGTCAAGATCGAGAACATCTCTTTCG
TCAATGTCAAGGGTACTATGAGCGACGGCAAGGATTACTACATCCTCTGT
GGTGATGGCAGCTGCTCTAACTTTGTCTTCACTGATGTCGACATCACCGG
TGGTAGCGATGATAGCTGCAACTACCCCTCTTCGGGATGCCCTTAAGCCC
GACCACTTCATTGTCGTCAAGGACATGTACAACTCCAAGATCGAGAACCT
CAACATCCTGAACTGGCCCGTCCACTGCTTCGAGATCGAGAACACCGAGT
ACCTGACCATCTCCGGCCTGATCCTCAACAACACCGCCGGTGACGCCGCC
AACAGCAAGAGTGACGGCGACCCGGCCGCCCACAACACCGACGGCTTCGA
CATCAAGCAGAGCGACTTCCTGACCCTCTCCAACTCCTGGGTGCACAACC
AGGACGACTGTGTTGCCGTTACCAGCGGTAGCTCGATCGTCGTCGACAAC
CTCTACTGCTACGGTGGTCACGGTCTCTCCATCGGCTCCATCGGCGGCAA
GAGCAACAACACCGTCGACGGCGTCACCTTCTCCAACTCCCAGGTCATTA
ACAGCGAGAACGGCTGCCGCATCAAGTCTAATGCTGATACCACTGGCGAG
ACCTTCGGTGACACCTACGACAGCGACTTCGACCCCATTGTCATCTCCGG
TACCGACGTGACCATCACCGGTGAGGAGGGACATGTCATCAACGGTAACG
GTGAAGCCTACTGGGACGGCGAGGGATCCAACGGCGGACAGGACAAGGCA
AGGCACCTGCTGTTGCAGCCACTCGCACCTCGGCGATCCCGACCACTTTC
CACACCACTGCCGTTCGTGTGCCCCTGTCCACCTCGGCAGCGGCGGCTGT
GACCTCCCAGGCTGTCCTCCCGGCGCAGAGCTCCGTGGCAGGCAACGGAG
GCACTACCTGCACAGTGACTGAGTACGCTTCGATCTCCTCTGCCGTCGCA
TCCTGCTCCAACATCCTCCTGTCCAACATCAACGCCCCTGCATCGAGCAC
CATCGATCTCACGGGTCTGCAGACCGGTGCGGCTGTCATCTTTGCTGGTG
AAACCATGATGAAGCGCAGCGCGCTCCTTGCCTCTTTCCTTCCTCTCGCC
CTGGGGTGCGACAGCGCTGAGACTCACTCCTGTGCCTCTGCCTTTTCCGT
CTCCTCTGCGGCCGCCGCTAGCTTCTGCGCCACCTTCACGGCGAGCACCG
TGACTGCCACGACTGGCGTGCCGGATGTCTTCCTTTCCAACTGTGACTAC
AAGACCAAGCACCTCTCCAGTGCCTGCAGCTGCCTGGGCACCGCCGATGG
ATCTGCTCCTGCTTCCACCCCGGCTGCCCCGGCAGTCTCCAGCAGCAGCA
AGGTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50161ASPNIDRAFT_50161Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50161-T1ASPNIDRAFT_50161-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50161-T1.cdsASPNIDRAFT_50161-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50161-T1.exon5ASPNIDRAFT_50161-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50161-T1.exon4ASPNIDRAFT_50161-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50161-T1.exon3ASPNIDRAFT_50161-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50161-T1.exon2ASPNIDRAFT_50161-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50161-T1.exon1ASPNIDRAFT_50161-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteSECRETED:SignalP(1-17)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productendo-polygalacturonase D
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000001.1supercontigACJE01000001.1:774921..776639 -
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