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ASPNIDRAFT_50782-T1, ASPNIDRAFT_50782-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_50782-T1
Unique NameASPNIDRAFT_50782-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000015.1:1580870..1581684+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_50782-T1 ID=ASPNIDRAFT_50782-T1|Name=ASPNIDRAFT_50782-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=815bp|location=Sequence derived from alignment at ACJE01000015.1:1580870..1581684+ (Aspergillus niger ATCC 1015)
ATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTC
CACCAAGGCCATCGCCGCCAAGGACACCGCATACTGTAAGTCAGCCAGTC
CACTGGAGAAAAAGCCGCCGTATCTTCAGAATTAACCAATGCGACATCAA
TAACACCAACAGGCCCCTACTCAAAGTTCCGTGTTGGCGCATGCATTTTG
ACCGAGTCGGGCGAATTCGTCCAGGGCGCCAATGTTGAAAATGCCTCTTA
TCCTGTTGGAACTTGTGCGGAGCGAGTAGCTTTTGGAAGTGCGATTGTAA
GCTATCAACTCTACACCTCTTTTTCTTTTAATCTCTGGGTCTAGTACTTG
CTGTACCTTGCACATGTCAGAAATCAACTGAAGAAAATCACTCATGCATT
TGCTTACTCGTCGGACTGCTTTGCAGGTGGCCGGGCATCGCAACTTCAAG
GCCATTGCCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCAT
GTGTAGACAGTTGTACGTATCGTTCTCTACCCCCTGGCCCTGGTTTTTCG
ATTTTTAAGCTGTACCCGCGAATAGCTTGCAAAAAAGAAGACAAGCGACC
ACTCAATCCATCCATTAATGATTGATTGGCTACCCGGAGATTTCTATAAT
TCCCTCATCCCAATAATGCGACAACAAACCACGCACGTACCTGGCTAACA
ACAATGATTTGTGTATCTCAGTATGAGTGAATTTACCACCCCAGAGTTCC
CTATCTTTATGTATGATGGTGAGGGGAACTATACTCTTACTACAATGGGA
GAGGTAATATATTGA
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Coding sequence (CDS) from alignment at ACJE01000015.1:1580870..1581684+

>ASPNIDRAFT_50782-T1 ID=ASPNIDRAFT_50782-T1|Name=ASPNIDRAFT_50782-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1596bp|location=Sequence derived from alignment at ACJE01000015.1:1580870..1581684+ (Aspergillus niger ATCC 1015)
ATGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTC
CACCAAGGCCATCGCCGCCAAGGACACCGCATACTGCCCCTACTCAAAGT
TCCGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGC
GCCAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGT
AGCTTTTGGAAGTGCGATTGTGGCCGGGCATCGCAACTTCAAGGCCATTG
CCGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGA
CAGTTTATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTATGA
TGGTGAGGGGAACTATACTCTTACTACAATGGGAGAGGTAATATATTGAA
TGGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTCC
ACCAAGGCCATCGCCGCCAAGGACACCGCATACTGCCCCTACTCAAAGTT
CCGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGCG
CCAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGTA
GCTTTTGGAAGTGCGATTGTGGCCGGGCATCGCAACTTCAAGGCCATTGC
CGTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGAC
AGTTTATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTATGAT
GGTGAGGGGAACTATACTCTTACTACAATGGGAGAGGTAATATATTGAAT
GGTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTCCA
CCAAGGCCATCGCCGCCAAGGACACCGCATACTGCCCCTACTCAAAGTTC
CGTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGCGC
CAATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGTAG
CTTTTGGAAGTGCGATTGTGGCCGGGCATCGCAACTTCAAGGCCATTGCC
GTTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGACA
GTTTATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTATGATG
GTGAGGGGAACTATACTCTTACTACAATGGGAGAGGTAATATATTGAATG
GTACACGCCGCCGACCACCTGTCTGCCCAAGAGCTCGAGACGCTCTCCAC
CAAGGCCATCGCCGCCAAGGACACCGCATACTGCCCCTACTCAAAGTTCC
GTGTTGGCGCATGCATTTTGACCGAGTCGGGCGAATTCGTCCAGGGCGCC
AATGTTGAAAATGCCTCTTATCCTGTTGGAACTTGTGCGGAGCGAGTAGC
TTTTGGAAGTGCGATTGTGGCCGGGCATCGCAACTTCAAGGCCATTGCCG
TTGCGACTGACATCAAACCTCCCGCTTCACCATGCGGCATGTGTAGACAG
TTTATGAGTGAATTTACCACCCCAGAGTTCCCTATCTTTATGTATGATGG
TGAGGGGAACTATACTCTTACTACAATGGGAGAGGTAATATATTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009972cytidine deamination
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
GO:0008270zinc ion binding
GO:0004126cytidine deaminase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50782ASPNIDRAFT_50782Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50782-T1.exon1ASPNIDRAFT_50782-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50782-T1.exon2ASPNIDRAFT_50782-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50782-T1.exon3ASPNIDRAFT_50782-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_50782-T1.exon4ASPNIDRAFT_50782-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50782-T1.cdsASPNIDRAFT_50782-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_50782-T1ASPNIDRAFT_50782-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09264RJL
DBxrefInterPro:IPR016193
DBxrefInterPro:IPR006262
DBxrefInterPro:IPR002125
DBxrefPFAM:PF08211
DBxrefPFAM:PF00383
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000015.1supercontigACJE01000015.1:1580870..1581684 +
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