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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000003.1:861880..864490+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_50927-T1 ID=ASPNIDRAFT_50927-T1|Name=ASPNIDRAFT_50927-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2611bp|location=Sequence derived from alignment at ACJE01000003.1:861880..864490+ (Aspergillus niger ATCC 1015)
ATGTGTCACAAGTCCAATTACTCATCCCCGAAATGGTGGAAAGAATCGGT
TGTGTATCAAGTGTATCCTGCAAGCTTCAACTGCGGTAAATCTACGACAA
CTACCAATGGATGGGGTGATGTGACTGGTATTATTGAGAAGGTTCCTTAT
TTGAAGAGCTTGGGTGTAGACATTGTATGGCTTAGTCCAAGTGAGTGAAA
ATCTGTAATTCGTGTTATAGTCGCAGACGTCTAGAGAACAATGCCTGACA
TCTCTTCCCCTAGTCTATACGTCCCCACAAGTCGACATGGGCTACGATAT
CGCGGATTATAAATCCATCGATCCGCGGTATGGCACCTTAGCAGACGTTG
ACCTTTTGATAAAATCCTTGAAGGACCATGACATGAGACTCATGATGGAC
CTGGTGGTTAATCATACATCTGATCAACACTCTTGGTTTGTCGAGTCAGC
TAGCTCCAAAGATTCTCCAAAACGTGATTGGTATATCTGGAGGCCGGCCA
AGGGATTCGACGAGGCCGGGAATCCAGTTCCTCCAAACAATTGGGCACAG
ATCCTGGGCGATACACTCAGCGCTTGGACTTGGCATGAGGAGACTCAGGA
GTTCTATTTGACTTTGCACACGTCAGCGCAAGCAGAGCTCAACTGGGAGA
ATCCAGACGTTGTCACCGCTGTTTATGATGTGAGTTTCGCTGGTCACCAA
GGGACCCTTCATCCTCGTAACCCGCGACTCTGAGACGTCTGAATGAGTGG
TGTTACTGATCAATCATCAATCTTGGTTTTAGGTAATGGAGTTTTGGCTG
CGTCGTGGGATCTGTGGTTTTCGCATGGACGTCATTAATTTCATTTCCAA
GGACCAGTCTTTCCCAGACGCCCCGATCATCGATCCAGCCTCCAAATACC
AGCCCGGCGAGCAGTTCTACACAAATGGGCCACGATTCCACGAGTTTATG
CACGGAATCTACGATAATGTTTTATCCAAGTACGACACCATCACTGTTGG
GGAAACCCCCTACGTCACTGATATGAAGGAGATCATCAAGACGGTGGGCT
CCACGGCAAAAGAGCTTAACATGGCATTCAATTTTGATCACATGGAAATT
GAAGATATCAAAACCAAAGGGGAGTCCAAATGGAGCTTGCGCGACTGGAA
GTTGACCGAGTTGAAAGGCATTTTGTCCGGCTGGCAGAAACGAATGAGGG
AGTGGGACGGCTGGAACGCCATCTTCCTGGAATGTCACGATCAGGCGCGG
TCGGTCTCCCGGTACACCAACGATTCGGATGAGTTCAGAGACCGGGGAGC
CAAATTACTAGCCCTTCTGGAGACGACGCTAGGTGGGACCATTTTCCTTT
ATCAGGGTCAGGAGATCGGCATGCGCAACTTTCCTGTTGAGTGGGGTCCC
GACACCGAGTACAAGGACATTGAGTCGGTCAACTTCTGGAAGAAATCCAA
AGAGCTCCACCCTGTTGGCTCTGAAGGCCTGGCCCAGGCTCGGACGCTCT
TGCAGAAAAAGGCCAGGGACCACGCCCGCACCCCGATGCAATGGAGTGCT
GACCCACATGCGGGCTTCACAGTCCCTGATGCGACACCTTGGATGAGGGT
GAATGATGACTATCGGACAGTTAATGTGGAGGCACAGATGTCTTTCCCGT
GGGAAATGAAAGGTGAACTATCAGTGTGGCAGTACTGGCAGCAGGCATTG
CAACGCCGAAAGCTACATAAGGGTGCTTTTGTTTATGGCGACTTTGAGGA
CCTGGACTATCACAACGAATCGGTCTTCGCGTATTCGAGGACTAGTGCAG
ATGGAAAGGAGACCTGGCTTGTTGCGATGAACTGGACAACGGATGCAGTC
GAATGGACGGTTCCTTCAGGCATCCACGTCACACGCTGGGTCTCCTCGAC
GCTCCAGACTGCCCCGCCTATGGCGGGCCAGTCGACTGTCACGCTCCGAG
CCCTGGAAGGTGTCGTTGGGTGTTGTAGTTAGCAGGTTGCGTGGTATCAC
TACTAGTACGGGTTACGTTGCGTTGATTGATATTAGTGGTCCAATTACTT
TAGCCGGTCCGCAAATCCCAGTTCCACGCTAATCCTTTTTGGCGATTTAA
TAGCCGCGCTCAGGTTCATAGTATAAGGCTAAGGATCAACGCCTGGCGAT
CTATTATTCTTATCTCACTGAAAGGCCATAATTGGGTAGAATAACAATTA
TTAGGGAAACTAGCTGAGTTCCACTGATGTACCTGGATCAACTCAACGAG
GATTACAGGAAGCAATGCCATCCTCGTCATACCAGGCCAATAATTTATCC
CTATTGACCAGAGAATGCATTCTTATCATTTTCTATTCAGCTCAAGTCTT
AGCCGATAAAACTCCGAATTATTATTCTCCAATTATACCAATATCCCGTC
ACTCTGCATAAGCATCTGCAGCTGAGACAACACATTACATCAACACCACA
ACCCCTCATTGCCAGACCATTAGTCACACACACTATCAAACTTATATTCC
CATCCACCTGAGCTGTCCAAGTACCACATCATAATCAATCACTTAACTGT
CATTCTGTCCAATAAGCCAGTCCCATCATGGAGCCTTCCAAAGAAAAGAA
CCTTGAGTTAA back to topCoding sequence (CDS) from alignment at ACJE01000003.1:861880..864490+ >ASPNIDRAFT_50927-T1 ID=ASPNIDRAFT_50927-T1|Name=ASPNIDRAFT_50927-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6756bp|location=Sequence derived from alignment at ACJE01000003.1:861880..864490+ (Aspergillus niger ATCC 1015)
ATGTGTCACAAGTCCAATTACTCATCCCCGAAATGGTGGAAAGAATCGGT
TGTGTATCAAGTGTATCCTGCAAGCTTCAACTGCGGTAAATCTACGACAA
CTACCAATGGATGGGGTGATGTGACTGGTATTATTGAGAAGGTTCCTTAT
TTGAAGAGCTTGGGTGTAGACATTGTATGGCTTAGTCCAATCTATACGTC
CCCACAAGTCGACATGGGCTACGATATCGCGGATTATAAATCCATCGATC
CGCGGTATGGCACCTTAGCAGACGTTGACCTTTTGATAAAATCCTTGAAG
GACCATGACATGAGACTCATGATGGACCTGGTGGTTAATCATACATCTGA
TCAACACTCTTGGTTTGTCGAGTCAGCTAGCTCCAAAGATTCTCCAAAAC
GTGATTGGTATATCTGGAGGCCGGCCAAGGGATTCGACGAGGCCGGGAAT
CCAGTTCCTCCAAACAATTGGGCACAGATCCTGGGCGATACACTCAGCGC
TTGGACTTGGCATGAGGAGACTCAGGAGTTCTATTTGACTTTGCACACGT
CAGCGCAAGCAGAGCTCAACTGGGAGAATCCAGACGTTGTCACCGCTGTT
TATGATGTAATGGAGTTTTGGCTGCGTCGTGGGATCTGTGGTTTTCGCAT
GGACGTCATTAATTTCATTTCCAAGGACCAGTCTTTCCCAGACGCCCCGA
TCATCGATCCAGCCTCCAAATACCAGCCCGGCGAGCAGTTCTACACAAAT
GGGCCACGATTCCACGAGTTTATGCACGGAATCTACGATAATGTTTTATC
CAAGTACGACACCATCACTGTTGGGGAAACCCCCTACGTCACTGATATGA
AGGAGATCATCAAGACGGTGGGCTCCACGGCAAAAGAGCTTAACATGGCA
TTCAATTTTGATCACATGGAAATTGAAGATATCAAAACCAAAGGGGAGTC
CAAATGGAGCTTGCGCGACTGGAAGTTGACCGAGTTGAAAGGCATTTTGT
CCGGCTGGCAGAAACGAATGAGGGAGTGGGACGGCTGGAACGCCATCTTC
CTGGAATGTCACGATCAGGCGCGGTCGGTCTCCCGGTACACCAACGATTC
GGATGAGTTCAGAGACCGGGGAGCCAAATTACTAGCCCTTCTGGAGACGA
CGCTAGGTGGGACCATTTTCCTTTATCAGGGTCAGGAGATCGGCATGCGC
AACTTTCCTGTTGAGTGGGGTCCCGACACCGAGTACAAGGACATTGAGTC
GGTCAACTTCTGGAAGAAATCCAAAGAGCTCCACCCTGTTGGCTCTGAAG
GCCTGGCCCAGGCTCGGACGCTCTTGCAGAAAAAGGCCAGGGACCACGCC
CGCACCCCGATGCAATGGAGTGCTGACCCACATGCGGGCTTCACAGTCCC
TGATGCGACACCTTGGATGAGGGTGAATGATGACTATCGGACAGTTAATG
TGGAGGCACAGATGTCTTTCCCGTGGGAAATGAAAGGTGAACTATCAGTG
TGGCAGTACTGGCAGCAGGCATTGCAACGCCGAAAGCTACATAAGGGTGC
TTTTGTTTATGGCGACTTTGAGGACCTGGACTATCACAACGAATCGGTCT
TCGCGTATTCGAGGACTAGTGCAGATGGAAAGGAGACCTGGCTTCCAGTC
CCATCATGGAGCCTTCCAAAGAAAAGAACCTTGAGTTAAATGTGTCACAA
GTCCAATTACTCATCCCCGAAATGGTGGAAAGAATCGGTTGTGTATCAAG
TGTATCCTGCAAGCTTCAACTGCGGTAAATCTACGACAACTACCAATGGA
TGGGGTGATGTGACTGGTATTATTGAGAAGGTTCCTTATTTGAAGAGCTT
GGGTGTAGACATTGTATGGCTTAGTCCAATCTATACGTCCCCACAAGTCG
ACATGGGCTACGATATCGCGGATTATAAATCCATCGATCCGCGGTATGGC
ACCTTAGCAGACGTTGACCTTTTGATAAAATCCTTGAAGGACCATGACAT
GAGACTCATGATGGACCTGGTGGTTAATCATACATCTGATCAACACTCTT
GGTTTGTCGAGTCAGCTAGCTCCAAAGATTCTCCAAAACGTGATTGGTAT
ATCTGGAGGCCGGCCAAGGGATTCGACGAGGCCGGGAATCCAGTTCCTCC
AAACAATTGGGCACAGATCCTGGGCGATACACTCAGCGCTTGGACTTGGC
ATGAGGAGACTCAGGAGTTCTATTTGACTTTGCACACGTCAGCGCAAGCA
GAGCTCAACTGGGAGAATCCAGACGTTGTCACCGCTGTTTATGATGTAAT
GGAGTTTTGGCTGCGTCGTGGGATCTGTGGTTTTCGCATGGACGTCATTA
ATTTCATTTCCAAGGACCAGTCTTTCCCAGACGCCCCGATCATCGATCCA
GCCTCCAAATACCAGCCCGGCGAGCAGTTCTACACAAATGGGCCACGATT
CCACGAGTTTATGCACGGAATCTACGATAATGTTTTATCCAAGTACGACA
CCATCACTGTTGGGGAAACCCCCTACGTCACTGATATGAAGGAGATCATC
AAGACGGTGGGCTCCACGGCAAAAGAGCTTAACATGGCATTCAATTTTGA
TCACATGGAAATTGAAGATATCAAAACCAAAGGGGAGTCCAAATGGAGCT
TGCGCGACTGGAAGTTGACCGAGTTGAAAGGCATTTTGTCCGGCTGGCAG
AAACGAATGAGGGAGTGGGACGGCTGGAACGCCATCTTCCTGGAATGTCA
CGATCAGGCGCGGTCGGTCTCCCGGTACACCAACGATTCGGATGAGTTCA
GAGACCGGGGAGCCAAATTACTAGCCCTTCTGGAGACGACGCTAGGTGGG
ACCATTTTCCTTTATCAGGGTCAGGAGATCGGCATGCGCAACTTTCCTGT
TGAGTGGGGTCCCGACACCGAGTACAAGGACATTGAGTCGGTCAACTTCT
GGAAGAAATCCAAAGAGCTCCACCCTGTTGGCTCTGAAGGCCTGGCCCAG
GCTCGGACGCTCTTGCAGAAAAAGGCCAGGGACCACGCCCGCACCCCGAT
GCAATGGAGTGCTGACCCACATGCGGGCTTCACAGTCCCTGATGCGACAC
CTTGGATGAGGGTGAATGATGACTATCGGACAGTTAATGTGGAGGCACAG
ATGTCTTTCCCGTGGGAAATGAAAGGTGAACTATCAGTGTGGCAGTACTG
GCAGCAGGCATTGCAACGCCGAAAGCTACATAAGGGTGCTTTTGTTTATG
GCGACTTTGAGGACCTGGACTATCACAACGAATCGGTCTTCGCGTATTCG
AGGACTAGTGCAGATGGAAAGGAGACCTGGCTTCCAGTCCCATCATGGAG
CCTTCCAAAGAAAAGAACCTTGAGTTAAATGTGTCACAAGTCCAATTACT
CATCCCCGAAATGGTGGAAAGAATCGGTTGTGTATCAAGTGTATCCTGCA
AGCTTCAACTGCGGTAAATCTACGACAACTACCAATGGATGGGGTGATGT
GACTGGTATTATTGAGAAGGTTCCTTATTTGAAGAGCTTGGGTGTAGACA
TTGTATGGCTTAGTCCAATCTATACGTCCCCACAAGTCGACATGGGCTAC
GATATCGCGGATTATAAATCCATCGATCCGCGGTATGGCACCTTAGCAGA
CGTTGACCTTTTGATAAAATCCTTGAAGGACCATGACATGAGACTCATGA
TGGACCTGGTGGTTAATCATACATCTGATCAACACTCTTGGTTTGTCGAG
TCAGCTAGCTCCAAAGATTCTCCAAAACGTGATTGGTATATCTGGAGGCC
GGCCAAGGGATTCGACGAGGCCGGGAATCCAGTTCCTCCAAACAATTGGG
CACAGATCCTGGGCGATACACTCAGCGCTTGGACTTGGCATGAGGAGACT
CAGGAGTTCTATTTGACTTTGCACACGTCAGCGCAAGCAGAGCTCAACTG
GGAGAATCCAGACGTTGTCACCGCTGTTTATGATGTAATGGAGTTTTGGC
TGCGTCGTGGGATCTGTGGTTTTCGCATGGACGTCATTAATTTCATTTCC
AAGGACCAGTCTTTCCCAGACGCCCCGATCATCGATCCAGCCTCCAAATA
CCAGCCCGGCGAGCAGTTCTACACAAATGGGCCACGATTCCACGAGTTTA
TGCACGGAATCTACGATAATGTTTTATCCAAGTACGACACCATCACTGTT
GGGGAAACCCCCTACGTCACTGATATGAAGGAGATCATCAAGACGGTGGG
CTCCACGGCAAAAGAGCTTAACATGGCATTCAATTTTGATCACATGGAAA
TTGAAGATATCAAAACCAAAGGGGAGTCCAAATGGAGCTTGCGCGACTGG
AAGTTGACCGAGTTGAAAGGCATTTTGTCCGGCTGGCAGAAACGAATGAG
GGAGTGGGACGGCTGGAACGCCATCTTCCTGGAATGTCACGATCAGGCGC
GGTCGGTCTCCCGGTACACCAACGATTCGGATGAGTTCAGAGACCGGGGA
GCCAAATTACTAGCCCTTCTGGAGACGACGCTAGGTGGGACCATTTTCCT
TTATCAGGGTCAGGAGATCGGCATGCGCAACTTTCCTGTTGAGTGGGGTC
CCGACACCGAGTACAAGGACATTGAGTCGGTCAACTTCTGGAAGAAATCC
AAAGAGCTCCACCCTGTTGGCTCTGAAGGCCTGGCCCAGGCTCGGACGCT
CTTGCAGAAAAAGGCCAGGGACCACGCCCGCACCCCGATGCAATGGAGTG
CTGACCCACATGCGGGCTTCACAGTCCCTGATGCGACACCTTGGATGAGG
GTGAATGATGACTATCGGACAGTTAATGTGGAGGCACAGATGTCTTTCCC
GTGGGAAATGAAAGGTGAACTATCAGTGTGGCAGTACTGGCAGCAGGCAT
TGCAACGCCGAAAGCTACATAAGGGTGCTTTTGTTTATGGCGACTTTGAG
GACCTGGACTATCACAACGAATCGGTCTTCGCGTATTCGAGGACTAGTGC
AGATGGAAAGGAGACCTGGCTTCCAGTCCCATCATGGAGCCTTCCAAAGA
AAAGAACCTTGAGTTAAATGTGTCACAAGTCCAATTACTCATCCCCGAAA
TGGTGGAAAGAATCGGTTGTGTATCAAGTGTATCCTGCAAGCTTCAACTG
CGGTAAATCTACGACAACTACCAATGGATGGGGTGATGTGACTGGTATTA
TTGAGAAGGTTCCTTATTTGAAGAGCTTGGGTGTAGACATTGTATGGCTT
AGTCCAATCTATACGTCCCCACAAGTCGACATGGGCTACGATATCGCGGA
TTATAAATCCATCGATCCGCGGTATGGCACCTTAGCAGACGTTGACCTTT
TGATAAAATCCTTGAAGGACCATGACATGAGACTCATGATGGACCTGGTG
GTTAATCATACATCTGATCAACACTCTTGGTTTGTCGAGTCAGCTAGCTC
CAAAGATTCTCCAAAACGTGATTGGTATATCTGGAGGCCGGCCAAGGGAT
TCGACGAGGCCGGGAATCCAGTTCCTCCAAACAATTGGGCACAGATCCTG
GGCGATACACTCAGCGCTTGGACTTGGCATGAGGAGACTCAGGAGTTCTA
TTTGACTTTGCACACGTCAGCGCAAGCAGAGCTCAACTGGGAGAATCCAG
ACGTTGTCACCGCTGTTTATGATGTAATGGAGTTTTGGCTGCGTCGTGGG
ATCTGTGGTTTTCGCATGGACGTCATTAATTTCATTTCCAAGGACCAGTC
TTTCCCAGACGCCCCGATCATCGATCCAGCCTCCAAATACCAGCCCGGCG
AGCAGTTCTACACAAATGGGCCACGATTCCACGAGTTTATGCACGGAATC
TACGATAATGTTTTATCCAAGTACGACACCATCACTGTTGGGGAAACCCC
CTACGTCACTGATATGAAGGAGATCATCAAGACGGTGGGCTCCACGGCAA
AAGAGCTTAACATGGCATTCAATTTTGATCACATGGAAATTGAAGATATC
AAAACCAAAGGGGAGTCCAAATGGAGCTTGCGCGACTGGAAGTTGACCGA
GTTGAAAGGCATTTTGTCCGGCTGGCAGAAACGAATGAGGGAGTGGGACG
GCTGGAACGCCATCTTCCTGGAATGTCACGATCAGGCGCGGTCGGTCTCC
CGGTACACCAACGATTCGGATGAGTTCAGAGACCGGGGAGCCAAATTACT
AGCCCTTCTGGAGACGACGCTAGGTGGGACCATTTTCCTTTATCAGGGTC
AGGAGATCGGCATGCGCAACTTTCCTGTTGAGTGGGGTCCCGACACCGAG
TACAAGGACATTGAGTCGGTCAACTTCTGGAAGAAATCCAAAGAGCTCCA
CCCTGTTGGCTCTGAAGGCCTGGCCCAGGCTCGGACGCTCTTGCAGAAAA
AGGCCAGGGACCACGCCCGCACCCCGATGCAATGGAGTGCTGACCCACAT
GCGGGCTTCACAGTCCCTGATGCGACACCTTGGATGAGGGTGAATGATGA
CTATCGGACAGTTAATGTGGAGGCACAGATGTCTTTCCCGTGGGAAATGA
AAGGTGAACTATCAGTGTGGCAGTACTGGCAGCAGGCATTGCAACGCCGA
AAGCTACATAAGGGTGCTTTTGTTTATGGCGACTTTGAGGACCTGGACTA
TCACAACGAATCGGTCTTCGCGTATTCGAGGACTAGTGCAGATGGAAAGG
AGACCTGGCTTCCAGTCCCATCATGGAGCCTTCCAAAGAAAAGAACCTTG
AGTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
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| GO:0003824 | catalytic activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | CAZy:GH13_1 |
| Note | CAZy:GH13_2 |
| Note | CAZy:GH13_20 |
| Note | CAZy:GH13_4 |
| Note | CAZy:GH13_35 |
| Note | CAZy:GH13_16 |
| Note | CAZy:GH13_30 |
| Note | CAZy:GH13_36 |
| Note | CAZy:GH13 |
| Note | CAZy:GH13_17 |
| Note | CAZy:GH13_23 |
| Note | CAZy:GH13_29 |
| Note | CAZy:GH13_31 |
| Note | CAZy:GH13_40 |
| DBxref | InterPro:IPR017853 |
| DBxref | InterPro:IPR006047 |
| DBxref | PFAM:PF00128 |
| Product | alpha-amylase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000003.1 | supercontig | ACJE01000003.1:861880..864490 + |
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