|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000016.1:1701842..1704003- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_51140-T1 ID=ASPNIDRAFT_51140-T1|Name=ASPNIDRAFT_51140-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2162bp|location=Sequence derived from alignment at ACJE01000016.1:1701842..1704003- (Aspergillus niger ATCC 1015)
ATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGA
CCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGT
CGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGAC
CGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAA
GAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGC
TGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCA
CTACATTTGGAGGCTCAAGCCGTACGTTATTGCTTCCCATAAGCATATCT
ACTCCCAGACATCTTCTGTCATAGTCTGTCCGCTCATCCTAACTCTCATC
TTCCTTAAAGAGCTACCGTTCAGAGAAATTCCGTCGCGCTGCCGAGATTT
ACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACGAAGAGAACGAC
TTGCGCACCAACTCATGGGCCACGGATGCACAGCTGCAGTGGAAGGGCTA
CCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGATCTAGAGGCGT
TCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCAAGGGCGAGTTC
CAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGGTTCGTGTGGTCAACC
CCGGATGGCGCACAAGAATGGTAGCTGATTAGCTTCACACAGAGCTCTGT
CGGACGTCGGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCC
GATTGCCGTGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGG
AAGCACAGTCTGTTCTGGAGGAAATTTCCGTTAGCGAGTATGGTTGTCAC
AAAACCTGGTTGACCTTGAACGTCTGAAGCTCACAAAATTTGATAGTATC
CCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTGCCCG
TGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCACGAGA
TCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAACCTC
GCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACGATGG
CATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCCTCGA
CGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCACGCA
CGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGCTCGA
CAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTCTACG
TGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGACCCTG
CAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCTTCAA
TCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGCCGTA
AAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCAGGCC
CAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCATCCCT
CCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTTTTCA
AGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGGCTAC
GTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGGTCGA
CACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCCTCCC
TCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGCCGCCGCCGCC
GCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAGATCG
CGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGACCCCA
GCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGATCGGTCTTCG
TACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGACACA
GGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCCACTC
AGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAGAAGAAG
GGCAAGCGGTAG back to topCoding sequence (CDS) from alignment at ACJE01000016.1:1701842..1704003- >ASPNIDRAFT_51140-T1 ID=ASPNIDRAFT_51140-T1|Name=ASPNIDRAFT_51140-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7824bp|location=Sequence derived from alignment at ACJE01000016.1:1701842..1704003- (Aspergillus niger ATCC 1015)
TATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCACGCTTG
CCCGTGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCTCTTCAC
GAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCAGGATAA
CCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGAAATACG
ATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCCTACCCC
TCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGCCGCTCA
CGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTATCTGCGC
TCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTCCAGCTC
TACGTGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGAGCGGAC
CCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAGTCCGCT
TCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTGGAGGGC
CGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATACTGGCA
GGCCCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAGGAGCAT
CCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGCGACCTT
TTCAAGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCCGTAGCCGG
CTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAGCACAGG
TCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAACATCGCC
TCCCTCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGCCGCCGC
CGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATAAGGAAG
ATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGATTACGAC
CCCAGCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGATCGGTC
TTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGGAGCGGA
CACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCTCCTCCC
ACTCAGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAATAAGAA
GAAGGGCAAGCGGTAGAGCTCTGTCGGACGTCGGAGGACCTCACCCCTGA
AGATCGGGCTGCAGAGCTGCTCCCGATTGCCGTGCAGCAGTTGTACGTCT
TGCTTCGCCAAGGGAAGTCGGAGGAAGCACAGTCTGTTCTGGAGGAAATT
TCCGTTAGCGAAGCTACCGTTCAGAGAAATTCCGTCGCGCTGCCGAGATT
TACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACGAAGAGAACGA
CTTGCGCACCAACTCATGGGCCACGGATGCACAGCTGCAGTGGAAGGGCT
ACCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGATCTAGAGGCG
TTCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCAAGGGCGAGTT
CCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGATGGCTGCCCAGTCG
CTGAGCTCGTTGCTGCAACGAGCATCCATTGACGACCACGAGGAAGTCCT
GCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGTCGGACTTGCATGCTC
AGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGACCGCTATGAGGACTGC
CTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAAGAAGAGAGCAGCTCT
GGAATACGCCTACGCTCTATATAAATGCGGTCAGCTGGACCCGGCGATTG
AGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCACTACATTTGGAGGCT
CAAGCCTATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCAACATCA
CGCTTGCCCGTGGCACGACCACTACCAATCCCTTCGCTCTATACAAGGCT
CTTCACGAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGAATACCA
GGATAACCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCGTTCAGA
AATACGATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAAGCTGCC
TACCCCTCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAACGCTGC
CGCTCACGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGATACTAT
CTGCGCTCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACAGCCGTC
CAGCTCTACGTGGGTGCGGGCAACACGACGTCCGCGATCACAACTCTAGA
GCGGACCCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACAAAGCAG
TCCGCTTCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTACAAGTTG
GAGGGCCGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGCAACATA
CTGGCAGGCCCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCGCCGCAG
GAGCATCCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAAGCGGGC
GACCTTTTCAAGTCTCTCTACCAGAAAGACACGACCGACCAGTTCGCCGT
AGCCGGCTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGGTAGAAG
CACAGGTCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGCGTCAAC
ATCGCCTCCCTCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGCCAACGC
CGCCGCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCAAGGATA
AGGAAGATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCCAAGGAT
TACGACCCCAGCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCTTCGCGA
TCGGTCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCGCTGCGG
AGCGGACACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCCCCGGCT
CCTCCCACTCAGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAAGAAGAA
TAAGAAGAAGGGCAAGCGGTAGAGCTCTGTCGGACGTCGGAGGACCTCAC
CCCTGAAGATCGGGCTGCAGAGCTGCTCCCGATTGCCGTGCAGCAGTTGT
ACGTCTTGCTTCGCCAAGGGAAGTCGGAGGAAGCACAGTCTGTTCTGGAG
GAAATTTCCGTTAGCGAAGCTACCGTTCAGAGAAATTCCGTCGCGCTGCC
GAGATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAACGAAGA
GAACGACTTGCGCACCAACTCATGGGCCACGGATGCACAGCTGCAGTGGA
AGGGCTACCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGATGATCTA
GAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGCCAAGGG
CGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGATGGCTGCC
CAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGACCACGAGGA
AGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGTCGGACTTGC
ATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGACCGCTATGAG
GACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAAGAAGAGAGC
AGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGCTGGACCCGG
CGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCACTACATTTG
GAGGCTCAAGCCTATCCCTGAGCTCTCGACGAAGAAGATCGCGCAGACCA
ACATCACGCTTGCCCGTGGCACGACCACTACCAATCCCTTCGCTCTATAC
AAGGCTCTTCACGAGATCCCCGATTCCACCGACAGCGACAAGCTCTTCGA
ATACCAGGATAACCTCGCGACGGGGAACTCATATGCGGCAGACCTCCTCG
TTCAGAAATACGATGGCATTATCCGCTCCACCTCCAAGGCGCTCGCTCAA
GCTGCCTACCCCTCGACGGAACCTCGTGCCAATCTGCTATCAGTCTACAA
CGCTGCCGCTCACGCACGCGGAGAAACAGGCACCAAGGCCTTGAAGCGGA
TACTATCTGCGCTCGACAAACGGCCCAAGGACCTTGGCCTCGCCCTCACA
GCCGTCCAGCTCTACGTGGGTGCGGGCAACACGACGTCCGCGATCACAAC
TCTAGAGCGGACCCTGCAACTGCTTGACGAGTCCATCTCCGAGCAAGACA
AAGCAGTCCGCTTCAATCCCGGCCTCTTGAGCATCCTCGTATCCCTCTAC
AAGTTGGAGGGCCGTAAAGTCCAAATCCGGACCGAACTCGCCAAAGCCGC
AACATACTGGCAGGCCCAAGCCGCCGAACCACCAGCCTCCCTGCTCCGCG
CCGCAGGAGCATCCCTCCTGCATTCCTCCGATCGCTCCGACCTAGCCAAA
GCGGGCGACCTTTTCAAGTCTCTCTACCAGAAAGACACGACCGACCAGTT
CGCCGTAGCCGGCTACGTCGCCTCCCAGGCAACGCTCGACTACTCCAAGG
TAGAAGCACAGGTCGACACTCTCCCCTCCGTCGCCGACCTGATCTCAGGC
GTCAACATCGCCTCCCTCGAAAATGCCGGCATCTCCCCCTCCTCCGCGGC
CAACGCCGCCGCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAAGCGCCA
AGGATAAGGAAGATCGCGCAACCAAGCGTGTTCGCAAGGACCGTCTGCCC
AAGGATTACGACCCCAGCAAGACCCCCGACCCAGAGCGTTGGCTGCCTCT
TCGCGATCGGTCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGCAGCGCG
CTGCGGAGCGGACACAGGGTGGTGTGGTGAACGAGAAGGCTGAAGAGTCC
CCGGCTCCTCCCACTCAGAAGGCTCAAGGAGGTGGTGGTGGCAGCTCGAA
GAAGAATAAGAAGAAGGGCAAGCGGTAGAGCTCTGTCGGACGTCGGAGGA
CCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCCGATTGCCGTGCAGC
AGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGGAAGCACAGTCTGTT
CTGGAGGAAATTTCCGTTAGCGAAGCTACCGTTCAGAGAAATTCCGTCGC
GCTGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCTGTCGAA
CGAAGAGAACGACTTGCGCACCAACTCATGGGCCACGGATGCACAGCTGC
AGTGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCCGATGCGGGAT
GATCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAGTATCGC
CAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTAAAGATG
GCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGACGACCA
CGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGAAGTCGG
ACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTTGACCGC
TATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCTGAAGAA
GAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTCAGCTGG
ACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGCGCACTA
CATTTGGAGGCTCAAGCCTATCCCTGAGCTCTCGACGAAGAAGATCGCGC
AGACCAACATCACGCTTGCCCGTGGCACGACCACTACCAATCCCTTCGCT
CTATACAAGGCTCTTCACGAGATCCCCGATTCCACCGACAGCGACAAGCT
CTTCGAATACCAGGATAACCTCGCGACGGGGAACTCATATGCGGCAGACC
TCCTCGTTCAGAAATACGATGGCATTATCCGCTCCACCTCCAAGGCGCTC
GCTCAAGCTGCCTACCCCTCGACGGAACCTCGTGCCAATCTGCTATCAGT
CTACAACGCTGCCGCTCACGCACGCGGAGAAACAGGCACCAAGGCCTTGA
AGCGGATACTATCTGCGCTCGACAAACGGCCCAAGGACCTTGGCCTCGCC
CTCACAGCCGTCCAGCTCTACGTGGGTGCGGGCAACACGACGTCCGCGAT
CACAACTCTAGAGCGGACCCTGCAACTGCTTGACGAGTCCATCTCCGAGC
AAGACAAAGCAGTCCGCTTCAATCCCGGCCTCTTGAGCATCCTCGTATCC
CTCTACAAGTTGGAGGGCCGTAAAGTCCAAATCCGGACCGAACTCGCCAA
AGCCGCAACATACTGGCAGGCCCAAGCCGCCGAACCACCAGCCTCCCTGC
TCCGCGCCGCAGGAGCATCCCTCCTGCATTCCTCCGATCGCTCCGACCTA
GCCAAAGCGGGCGACCTTTTCAAGTCTCTCTACCAGAAAGACACGACCGA
CCAGTTCGCCGTAGCCGGCTACGTCGCCTCCCAGGCAACGCTCGACTACT
CCAAGGTAGAAGCACAGGTCGACACTCTCCCCTCCGTCGCCGACCTGATC
TCAGGCGTCAACATCGCCTCCCTCGAAAATGCCGGCATCTCCCCCTCCTC
CGCGGCCAACGCCGCCGCCGCCGCAGCCATGGCCGGCGCGCGGAAGAGAA
GCGCCAAGGATAAGGAAGATCGCGCAACCAAGCGTGTTCGCAAGGACCGT
CTGCCCAAGGATTACGACCCCAGCAAGACCCCCGACCCAGAGCGTTGGCT
GCCTCTTCGCGATCGGTCTTCGTACCGCCCCAAGGGCCGCAAGGGTAAGC
AGCGCGCTGCGGAGCGGACACAGGGTGGTGTGGTGAACGAGAAGGCTGAA
GAGTCCCCGGCTCCTCCCACTCAGAAGGCTCAAGGAGGTGGTGGTGGCAG
CTCGAAGAAGAATAAGAAGAAGGGCAAGCGGTAGAGCTCTGTCGGACGTC
GGAGGACCTCACCCCTGAAGATCGGGCTGCAGAGCTGCTCCCGATTGCCG
TGCAGCAGTTGTACGTCTTGCTTCGCCAAGGGAAGTCGGAGGAAGCACAG
TCTGTTCTGGAGGAAATTTCCGTTAGCGAAGCTACCGTTCAGAGAAATTC
CGTCGCGCTGCCGAGATTTACGAAGAATTGTCCAAAGGCGATGCGTCCCT
GTCGAACGAAGAGAACGACTTGCGCACCAACTCATGGGCCACGGATGCAC
AGCTGCAGTGGAAGGGCTACCCCCAGTTTGTACGCCATAACAGGCCGATG
CGGGATGATCTAGAGGCGTTCGAGACTGTCTATAACGCAGCTTGCTTGAG
TATCGCCAAGGGCGAGTTCCAGCAGGGGCAAGTTCTATTGACTCGGGCTA
AAGATGGCTGCCCAGTCGCTGAGCTCGTTGCTGCAACGAGCATCCATTGA
CGACCACGAGGAAGTCCTGCAGTCATGCAATGCCGCGTTGGCCAAGTCGA
AGTCGGACTTGCATGCTCAGCATATCAAGGCAGTTGCTCTGCTGAAGCTT
GACCGCTATGAGGACTGCCTGCGAGTATTCGAAGAAGCCGGTGATGGTCT
GAAGAAGAGAGCAGCTCTGGAATACGCCTACGCTCTATATAAATGCGGTC
AGCTGGACCCGGCGATTGAGGTGGTATCTCGCGTCGCTGGTGAGAGGGGC
GCACTACATTTGGAGGCTCAAGCC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0048500 | signal recognition particle |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0008312 | 7S RNA binding |
| GO:0005515 | protein binding |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006614 | SRP-dependent cotranslational protein targeting to membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013699 |
| DBxref | InterPro:IPR031545 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR026270 |
| DBxref | PFAM:PF17004 |
| DBxref | PFAM:PF08492 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000016.1 | supercontig | ACJE01000016.1:1701842..1704003 - |
|
