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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000008.1:559045..560601+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_51633-T1 ID=ASPNIDRAFT_51633-T1|Name=ASPNIDRAFT_51633-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1557bp|location=Sequence derived from alignment at ACJE01000008.1:559045..560601+ (Aspergillus niger ATCC 1015)
GTCAACAATCATCTCCCCTCTCCTCTCTCCATCTTCCCCAGTCATTCTCT
CCATCTTACCACCACACCACACCACATACTACTCCCGCATCTACACATCT
ATACACAACACACACACCAACAAAGACAAAAAAAAGAGTAAACAATGTCT
CTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTACGGCACCGTGCA
ATCCACTTCCCCCAGTGCCGCCGCCATCGCCAGCCGTATCCCACCTGCTC
TGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACTGGACCCGCGAA
GAGATTCAACAGATTTACGAGACGCCCTTGAACCAGCTTACCTATGCCGC
TGTACGTCCATACCCTTTCCCCCTTCAACCCCCACCAAATCACACAATAT
CGTAACACTCACTAACGATACTCTAAATATAGGCAGCAGTCCACCGCCGC
TTCCACGACCCCAGCGCCATCCAAATGTGCACACTAATGAACATCAAAAC
GGGCGGCTGCAGCGAAGACTGCTCCTACTGCGCACAATCCTCCCGCTACC
AAACGGGCCTAAAAGCCACCAAGATGTCCCCAGTCGACGAAGTCCTCGAA
GCCGCCCGCATTGCCAAATCCAACGGCAGCACACGGTTCTGCATGGGCGC
CGCGTGGCGCGACATGCGCGGCCGCAAGACCAGCCTCAAGAACATCAAAT
CCATGGTCTCTGGAGTTCGGGGCATGGGGATGGAAGTCTGCGTTACACTC
GGAATGATCGACGAAGCACAAGCCAAGGAACTCAAAGACGCGGGACTCAC
GGCGTACAACCATAACCTGGATACATCAAGGGAGTTTTACCCGGAGATTA
TCACGACGAGGTCGTATGATGAGAGATTGAAGACGTTGGAAAATGTGCGG
GATGCCGGGATCAATGTCTGCTCCGGTGGAATTTTGGGTCTGGGTGAGAA
GGATGAGGATCGCGTGGGGTTGATTTATACGATGTCGGGGTTGGAGAAGC
ATCCGGAGAGTTTCCCGGTTAATGCTCTTGTGCCGATTCCCGGAACGCCG
CTTGGCGAGAGGAAGATGATTTCGTTTGATAAGATTCTTAGGACGGTTGC
TACCGCGAGAGTGGTCATGCCGGCTACGATTGTGAGACTTGCTGCGGGCA
GAATTTCGTTGAGTGAGGAGCAGCAGGTTGCTTGTTTTATGGCGGGAGCT
AATGCTGTTTTTACGGGTGAGAAGATGCTTACGACGGAGTGTAATGGATG
GGATGAGGATAGGGCCATGTTTGAGAAGTGGGGTTTCTATCCCATGAAGA
GCTTTGAGGGGGAGCATGTTAAGGATGAGGTCAAGGTCAAGGAGGTCGAG
GGGACTGCGCAGGCCGCGGTTAGTGCGTAAGTAGATAGATGAATTAAGAT
GATTATATTGGTTCAAGAGTTTTATATTTGAATAGCATCATGTAACTTGC
TGTTATTCGGATCATCCAGAAACACATGACTAGTTCTTCATGAACAGTAT
GCACACCCCAAGTCAGTAGTCTGATCATAGAGTCTCCCACGTTCTTCTCC
CACTTCA back to topCoding sequence (CDS) from alignment at ACJE01000008.1:559045..560601+ >ASPNIDRAFT_51633-T1 ID=ASPNIDRAFT_51633-T1|Name=ASPNIDRAFT_51633-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2310bp|location=Sequence derived from alignment at ACJE01000008.1:559045..560601+ (Aspergillus niger ATCC 1015)
ATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTACGGCAC
CGTGCAATCCACTTCCCCCAGTGCCGCCGCCATCGCCAGCCGTATCCCAC
CTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACTGGACC
CGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAGCTTACCTA
TGCCGCTGCAGCAGTCCACCGCCGCTTCCACGACCCCAGCGCCATCCAAA
TGTGCACACTAATGAACATCAAAACGGGCGGCTGCAGCGAAGACTGCTCC
TACTGCGCACAATCCTCCCGCTACCAAACGGGCCTAAAAGCCACCAAGAT
GTCCCCAGTCGACGAAGTCCTCGAAGCCGCCCGCATTGCCAAATCCAACG
GCAGCACACGGTTCTGCATGGGCGCCGCGTGGCGCGACATGCGCGGCCGC
AAGACCAGCCTCAAGAACATCAAATCCATGGTCTCTGGAGTTCGGGGCAT
GGGGATGGAAGTCTGCGTTACACTCGGAATGATCGACGAAGCACAAGCCA
AGGAACTCAAAGACGCGGGACTCACGGCGTACAACCATAACCTGGATACA
TCAAGGGAGTTTTACCCGGAGATTATCACGACGAGGTCGTATGATGAGAG
ATTGAAGACGTTGGAAAATGTGCGGGATGCCGGGATCAATGTCTGCTCCG
GTGGAATTTTGGGTCTGGGTGAGAAGGATGAGGATCGCGTGGGGTTGATT
TATACGATGTCGGGGTTGGAGAAGCATCCGGAGAGTTTCCCGGTTAATGC
TCTTGTGCCGATTCCCGGAACGCCGCTTGGCGAGAGGAAGATGATTTCGT
TTGATAAGATTCTTAGGACGGTTGCTACCGCGAGAGTGGTCATGCCGGCT
ACGATTGTGAGACTTGCTGCGGGCAGAATTTCGTTGAGTGAGGAGCAGCA
GGTTGCTTGTTTTATGGCGGGAGCTAATGCTGTTTTTACGGGTGAGAAGA
TGCTTACGACGGAGTGTAATGGATGGGATGAGGATAGGGCCATGTTTGAG
AAGTGGGGTTTCTATCCCATGAAGAGCTTTGAGGGGGAGCATGTTAAGGA
TGAGGTCAAGGTCAAGGAGGTCGAGGGGACTGCGCAGGCCGCGGTTAGTG
CGTAAATGTCTCTCCGTACCCTCCCCGGGGTCCTCCTCCGCCGCAGCTAC
GGCACCGTGCAATCCACTTCCCCCAGTGCCGCCGCCATCGCCAGCCGTAT
CCCACCTGCTCTGCGTGAAGCCACTGCCGCCACGGCACCACGCACCAACT
GGACCCGCGAAGAGATTCAACAGATTTACGAGACGCCCTTGAACCAGCTT
ACCTATGCCGCTGCAGCAGTCCACCGCCGCTTCCACGACCCCAGCGCCAT
CCAAATGTGCACACTAATGAACATCAAAACGGGCGGCTGCAGCGAAGACT
GCTCCTACTGCGCACAATCCTCCCGCTACCAAACGGGCCTAAAAGCCACC
AAGATGTCCCCAGTCGACGAAGTCCTCGAAGCCGCCCGCATTGCCAAATC
CAACGGCAGCACACGGTTCTGCATGGGCGCCGCGTGGCGCGACATGCGCG
GCCGCAAGACCAGCCTCAAGAACATCAAATCCATGGTCTCTGGAGTTCGG
GGCATGGGGATGGAAGTCTGCGTTACACTCGGAATGATCGACGAAGCACA
AGCCAAGGAACTCAAAGACGCGGGACTCACGGCGTACAACCATAACCTGG
ATACATCAAGGGAGTTTTACCCGGAGATTATCACGACGAGGTCGTATGAT
GAGAGATTGAAGACGTTGGAAAATGTGCGGGATGCCGGGATCAATGTCTG
CTCCGGTGGAATTTTGGGTCTGGGTGAGAAGGATGAGGATCGCGTGGGGT
TGATTTATACGATGTCGGGGTTGGAGAAGCATCCGGAGAGTTTCCCGGTT
AATGCTCTTGTGCCGATTCCCGGAACGCCGCTTGGCGAGAGGAAGATGAT
TTCGTTTGATAAGATTCTTAGGACGGTTGCTACCGCGAGAGTGGTCATGC
CGGCTACGATTGTGAGACTTGCTGCGGGCAGAATTTCGTTGAGTGAGGAG
CAGCAGGTTGCTTGTTTTATGGCGGGAGCTAATGCTGTTTTTACGGGTGA
GAAGATGCTTACGACGGAGTGTAATGGATGGGATGAGGATAGGGCCATGT
TTGAGAAGTGGGGTTTCTATCCCATGAAGAGCTTTGAGGGGGAGCATGTT
AAGGATGAGGTCAAGGTCAAGGAGGTCGAGGGGACTGCGCAGGCCGCGGT
TAGTGCGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009102 | biotin biosynthetic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0004076 | biotin synthase activity |
| GO:0003824 | catalytic activity |
| GO:0051536 | iron-sulfur cluster binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013785 |
| DBxref | InterPro:IPR002684 |
| DBxref | InterPro:IPR024177 |
| DBxref | InterPro:IPR007197 |
| DBxref | InterPro:IPR010722 |
| DBxref | InterPro:IPR006638 |
| DBxref | PFAM:PF04055 |
| DBxref | PFAM:PF06968 |
| Product | biotin synthase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000008.1 | supercontig | ACJE01000008.1:559045..560601 + |
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