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ASPNIDRAFT_51810-T1, ASPNIDRAFT_51810-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51810-T1
Unique NameASPNIDRAFT_51810-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2486032..2486955-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51810-T1 ID=ASPNIDRAFT_51810-T1|Name=ASPNIDRAFT_51810-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=924bp|location=Sequence derived from alignment at ACJE01000004.1:2486032..2486955- (Aspergillus niger ATCC 1015)
ATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGGTACCAATA
CCCCCTCCCATCCCATTTCCCCCTAAACACCTATACTAAAAAAATGTGAA
TAAAACAGGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGA
AGCCCTGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGACCCGACA
AGCTCGCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCT
CTCCTGACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGT
GCTGGCTGAATCGGGTATTATCATCGAGTACCTGCTCGATCACTTCGGCT
CCAATGCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGAT
GGTGTAGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGTACTTCAT
GCACTATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTA
TGGATAGTATGTTTCCCATGACCCATACCAGATCTATGTAATGTGTGTGT
GTGTGCTAATGATGATGACAGCGGTGAAAAACCCCCCTGGAATGCCCTTC
TTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGGTCGAGAAGGCGTT
CCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTGGAAGATCAGCTGC
GGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGACGGAGTTGACGGCC
GCGGACATTATGATGAGTTTCCCGGTGATTGCTATGTCCGGGAGGTTGGA
GGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTATGCGGATAGATTGG
AGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGTGGAGGAGGTGGAT
GGGAAGTTTGAGGCTTCCCTGTGA
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Coding sequence (CDS) from alignment at ACJE01000004.1:2486032..2486955-

>ASPNIDRAFT_51810-T1 ID=ASPNIDRAFT_51810-T1|Name=ASPNIDRAFT_51810-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2376bp|location=Sequence derived from alignment at ACJE01000004.1:2486032..2486955- (Aspergillus niger ATCC 1015)
CGGTGAAAAACCCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGC
CTCGTCGCGGGCCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTC
GCACTTGGAGTTCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTG
CCTATCTCTGCGGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTC
CCGGTGATTGCTATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCC
GCTGCTGAAGGGGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTA
GGGCTGTGAAGAAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTG
TGAGCTCTCCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCC
TGCACCTCAACTACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTC
GCGCCCCCGGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCT
GACTATCCAGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGG
CTGAATCGGGTATTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAAT
GCAGAGAAACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGT
AGTTGGCGGAGAAACAGAGGAATGGATGCGCTATCGGTACTTCATGCACT
ATGCTGAGGGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGAT
AATGACCGACCCCAACAAAGGCACCAAAATCACCCTCTACTGCGGTGAAA
AACCCCCCTGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGC
GGGCCAGGTCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGG
AGTTCCTGGAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTC
TGCGGGACGGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGAT
TGCTATGTCCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGA
AGGGGTATGCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTG
AAGAAGGTGGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAGCTCT
CCCAATCCCGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTC
AACTACGAGCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCC
GGAACTGAAAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCC
AGCCCGCGAATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCG
GGTATTATCATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAA
ACCTCTCCTCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCG
GAGAAACAGAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAG
GGCAGTCTCATGCCGTTTTTGGTCATGCAGTTGGTTATGGATAATGACCG
ACCCCAACAAAGGCACCAAAATCACCCTCTACTGCGGTGAAAAACCCCCC
TGGAATGCCCTTCTTCGTCAAGCCTCTCCCGCGCCTCGTCGCGGGCCAGG
TCGAGAAGGCGTTCCTGGCGCGAAACATCCAGTCGCACTTGGAGTTCCTG
GAAGATCAGCTGCGGAGTAGTCCTAATGGGGGTGCCTATCTCTGCGGGAC
GGAGTTGACGGCCGCGGACATTATGATGAGTTTCCCGGTGATTGCTATGT
CCGGGAGGTTGGAGGAGCAGTTGGACAAGTTTCCGCTGCTGAAGGGGTAT
GCGGATAGATTGGAGAAGGAGGAGGGATATATTAGGGCTGTGAAGAAGGT
GGAGGAGGTGGATGGGAAGTTTGAGGCTTCCCTGTGAGCTCTCCCAATCC
CGCTCTCACCGCATCCTCTGGCTCCTCGAAGCCCTGCACCTCAACTACGA
GCTAAAGATCTACCACCGCGGACCCGACAAGCTCGCGCCCCCGGAACTGA
AAGAGATCCATCCGTTAGGAAAGTCGCCTCTCCTGACTATCCAGCCCGCG
AATGCCACTCCAGACCAGAAGCCCATTGTGCTGGCTGAATCGGGTATTAT
CATCGAGTACCTGCTCGATCACTTCGGCTCCAATGCAGAGAAACCTCTCC
TCCCGCCCCGGTGGAAAGATACCCAAGATGGTGTAGTTGGCGGAGAAACA
GAGGAATGGATGCGCTATCGGTACTTCATGCACTATGCTGAGGGCAGTCT
CATGCCGTTTTTGGTCATGCAGTTGGTTATGGATAATGACCGACCCCAAC
AAAGGCACCAAAATCACCCTCTACTG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51810ASPNIDRAFT_51810Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51810-T1ASPNIDRAFT_51810-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51810-T1.cdsASPNIDRAFT_51810-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51810-T1.exon3ASPNIDRAFT_51810-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51810-T1.exon2ASPNIDRAFT_51810-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51810-T1.exon1ASPNIDRAFT_51810-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR040079
DBxrefInterPro:IPR004046
DBxrefInterPro:IPR004045
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF14497
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2486032..2486955 -
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