You are here

Home

ASPNIDRAFT_51854-T1, ASPNIDRAFT_51854-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51854-T1
Unique NameASPNIDRAFT_51854-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:2139984..2141622+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51854-T1 ID=ASPNIDRAFT_51854-T1|Name=ASPNIDRAFT_51854-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1639bp|location=Sequence derived from alignment at ACJE01000004.1:2139984..2141622+ (Aspergillus niger ATCC 1015)
ATGCCCAAAGAAAAGGAATCCAAGCTCTCCTTCAACCTCAAAACCCCCAA
GGGTACCAAGGACTGGTCCGGCTCCGACGCCCTCCTCCGCGACCGCATCT
TCTCCACCATCGCCGATGTCTTCAAGCGCCATGGCGGTACTGCCCTCGAC
ACCCCCGTCTTCGAGCTGCGCGAGATTCTCGCCGGTAAGTATGGCGAGGA
CTCCAAGCTCATTTACGACCTTCAAGACCAGGGTGGAGAAATCTGCTCTC
TCCGCTACGATCTCACCGTCCCCTTCGCCCGCTGGCTCGCCATGAACCCG
GATGTCCGCAGCATGAAGCGCTACCACATCGCCAAGGTGTACCGTCGCGA
TCAGCCCGCCGTGAGCAAGGGTCGCATGCGCGAGTTCTACCAGTGCGATT
TCGATATCGCCGGTACCTTCGATCCCATGGTCCCCGATGCCGAGATCCTG
CGCATCGTCACCGAAGTCTTCGAGGAGCTGGGCTGGAACGGCCGCTATAA
CATCAAGATCAACCACCGGAAGATTCTGGACGGTGTGTTCCAGGTCTGCG
GTGTGCCCGAGGAGAAGATCCGTCCCATCTCCAGTGCCGTCGACAAGCTG
GACAAGATGCCCTGGGCGGACGTGCGCAAGGAAATGGTCGAGGAGAAGGG
CCTGGACGGCGCCGTGGCTGACAAGATCGAGACATACGTGATGCACAAGG
GCGGTCGCGAACTCCTTGATAACCTCCTCAAGGATGAGGGCCTGACTGCC
AACGAGTCTGCCAAGGCCGGTCTGGAAGATATGGGCCTGCTTATGGATTA
CCTCGAGGCATTCGGTGTGCTGGACAAGATCTCCTTCGACATGAGCTTGG
CCCGCGGTCTCGATTATTACACCGGTGTGATCTATGAGGTCGTTACCGAG
GGCTCCGCCCCCGCCGTGGCGTCCTCCGCACCGGAGGCCCAGGCCGTGCA
GAAGTCCGGCAAGAAGAGCAAGTCCAAGGGCGGCAATCTGGAGGATGACG
ACCGCTCCAACGACCCGACCCTGGGTGTCGGCAGTGTCGCCGCAGGAGGT
CGCTATGACAACCTGGTGGGCATGTTCCTGCCCAAGGCGCAGATTCCCTG
TGTGGGTGTGTCCTTCGGTGTGGACCGTATCTTCTCCATCACCAAGGCCC
GTCTCGAGCGGGAGAAGAGCGCTGAAGCCCTCCGCAGCAGCGAGGTCGAT
GCCTACGTGATGGCCTTTGGCGGTAAGGGCTTCACGGGTATGTTGAAGGA
GCGGATGAGCGTGTGCCAGACTCTCTGGAACTCTGGCGTCAAGGTAAGCT
CCCCCACCCCCACCTACCATCTTTCCTCCCCTCCTGCTATATACTAATAA
TCCATAGGCCGAATTCTCCTACAAAGTCAAGCCCAAGCTCCCCCAACAAT
TCAAGGCCGCCGAACAAGCCGGCGTCCCCTTCGCCGTCATCCTGGGCGAG
GACGAGCTCGCGGCCGGCAAGGTTCGCGTCAAGGAAATGGGTCTGGAGGA
CGGACACCCCGAGAAGGAAGGTGTGCTGGTTGATCTGACTGCTCTGCCGG
CGGAGGTCAAGGCCCGGGTGGCTAAGAAGCGAGGAGAGAGTGTCGATGGT
GTTGCGCAGCAGTTGGGTGAGATGAAGGTTGATGCATAG
back to top

Coding sequence (CDS) from alignment at ACJE01000004.1:2139984..2141622+

>ASPNIDRAFT_51854-T1 ID=ASPNIDRAFT_51854-T1|Name=ASPNIDRAFT_51854-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3150bp|location=Sequence derived from alignment at ACJE01000004.1:2139984..2141622+ (Aspergillus niger ATCC 1015)
ATGCCCAAAGAAAAGGAATCCAAGCTCTCCTTCAACCTCAAAACCCCCAA
GGGTACCAAGGACTGGTCCGGCTCCGACGCCCTCCTCCGCGACCGCATCT
TCTCCACCATCGCCGATGTCTTCAAGCGCCATGGCGGTACTGCCCTCGAC
ACCCCCGTCTTCGAGCTGCGCGAGATTCTCGCCGGTAAGTATGGCGAGGA
CTCCAAGCTCATTTACGACCTTCAAGACCAGGGTGGAGAAATCTGCTCTC
TCCGCTACGATCTCACCGTCCCCTTCGCCCGCTGGCTCGCCATGAACCCG
GATGTCCGCAGCATGAAGCGCTACCACATCGCCAAGGTGTACCGTCGCGA
TCAGCCCGCCGTGAGCAAGGGTCGCATGCGCGAGTTCTACCAGTGCGATT
TCGATATCGCCGGTACCTTCGATCCCATGGTCCCCGATGCCGAGATCCTG
CGCATCGTCACCGAAGTCTTCGAGGAGCTGGGCTGGAACGGCCGCTATAA
CATCAAGATCAACCACCGGAAGATTCTGGACGGTGTGTTCCAGGTCTGCG
GTGTGCCCGAGGAGAAGATCCGTCCCATCTCCAGTGCCGTCGACAAGCTG
GACAAGATGCCCTGGGCGGACGTGCGCAAGGAAATGGTCGAGGAGAAGGG
CCTGGACGGCGCCGTGGCTGACAAGATCGAGACATACGTGATGCACAAGG
GCGGTCGCGAACTCCTTGATAACCTCCTCAAGGATGAGGGCCTGACTGCC
AACGAGTCTGCCAAGGCCGGTCTGGAAGATATGGGCCTGCTTATGGATTA
CCTCGAGGCATTCGGTGTGCTGGACAAGATCTCCTTCGACATGAGCTTGG
CCCGCGGTCTCGATTATTACACCGGTGTGATCTATGAGGTCGTTACCGAG
GGCTCCGCCCCCGCCGTGGCGTCCTCCGCACCGGAGGCCCAGGCCGTGCA
GAAGTCCGGCAAGAAGAGCAAGTCCAAGGGCGGCAATCTGGAGGATGACG
ACCGCTCCAACGACCCGACCCTGGGTGTCGGCAGTGTCGCCGCAGGAGGT
CGCTATGACAACCTGGTGGGCATGTTCCTGCCCAAGGCGCAGATTCCCTG
TGTGGGTGTGTCCTTCGGTGTGGACCGTATCTTCTCCATCACCAAGGCCC
GTCTCGAGCGGGAGAAGAGCGCTGAAGCCCTCCGCAGCAGCGAGGTCGAT
GCCTACGTGATGGCCTTTGGCGGTAAGGGCTTCACGGGTATGTTGAAGGA
GCGGATGAGCGTGTGCCAGACTCTCTGGAACTCTGGCGTCAAGGCCGAAT
TCTCCTACAAAGTCAAGCCCAAGCTCCCCCAACAATTCAAGGCCGCCGAA
CAAGCCGGCGTCCCCTTCGCCGTCATCCTGGGCGAGGACGAGCTCGCGGC
CGGCAAGGTTCGCGTCAAGGAAATGGGTCTGGAGGACGGACACCCCGAGA
AGGAAGGTGTGCTGGTTGATCTGACTGCTCTGCCGGCGGAGGTCAAGGCC
CGGGTGGCTAAGAAGCGAGGAGAGAGTGTCGATGGTGTTGCGCAGCAGTT
GGGTGAGATGAAGGTTGATGCATAGATGCCCAAAGAAAAGGAATCCAAGC
TCTCCTTCAACCTCAAAACCCCCAAGGGTACCAAGGACTGGTCCGGCTCC
GACGCCCTCCTCCGCGACCGCATCTTCTCCACCATCGCCGATGTCTTCAA
GCGCCATGGCGGTACTGCCCTCGACACCCCCGTCTTCGAGCTGCGCGAGA
TTCTCGCCGGTAAGTATGGCGAGGACTCCAAGCTCATTTACGACCTTCAA
GACCAGGGTGGAGAAATCTGCTCTCTCCGCTACGATCTCACCGTCCCCTT
CGCCCGCTGGCTCGCCATGAACCCGGATGTCCGCAGCATGAAGCGCTACC
ACATCGCCAAGGTGTACCGTCGCGATCAGCCCGCCGTGAGCAAGGGTCGC
ATGCGCGAGTTCTACCAGTGCGATTTCGATATCGCCGGTACCTTCGATCC
CATGGTCCCCGATGCCGAGATCCTGCGCATCGTCACCGAAGTCTTCGAGG
AGCTGGGCTGGAACGGCCGCTATAACATCAAGATCAACCACCGGAAGATT
CTGGACGGTGTGTTCCAGGTCTGCGGTGTGCCCGAGGAGAAGATCCGTCC
CATCTCCAGTGCCGTCGACAAGCTGGACAAGATGCCCTGGGCGGACGTGC
GCAAGGAAATGGTCGAGGAGAAGGGCCTGGACGGCGCCGTGGCTGACAAG
ATCGAGACATACGTGATGCACAAGGGCGGTCGCGAACTCCTTGATAACCT
CCTCAAGGATGAGGGCCTGACTGCCAACGAGTCTGCCAAGGCCGGTCTGG
AAGATATGGGCCTGCTTATGGATTACCTCGAGGCATTCGGTGTGCTGGAC
AAGATCTCCTTCGACATGAGCTTGGCCCGCGGTCTCGATTATTACACCGG
TGTGATCTATGAGGTCGTTACCGAGGGCTCCGCCCCCGCCGTGGCGTCCT
CCGCACCGGAGGCCCAGGCCGTGCAGAAGTCCGGCAAGAAGAGCAAGTCC
AAGGGCGGCAATCTGGAGGATGACGACCGCTCCAACGACCCGACCCTGGG
TGTCGGCAGTGTCGCCGCAGGAGGTCGCTATGACAACCTGGTGGGCATGT
TCCTGCCCAAGGCGCAGATTCCCTGTGTGGGTGTGTCCTTCGGTGTGGAC
CGTATCTTCTCCATCACCAAGGCCCGTCTCGAGCGGGAGAAGAGCGCTGA
AGCCCTCCGCAGCAGCGAGGTCGATGCCTACGTGATGGCCTTTGGCGGTA
AGGGCTTCACGGGTATGTTGAAGGAGCGGATGAGCGTGTGCCAGACTCTC
TGGAACTCTGGCGTCAAGGCCGAATTCTCCTACAAAGTCAAGCCCAAGCT
CCCCCAACAATTCAAGGCCGCCGAACAAGCCGGCGTCCCCTTCGCCGTCA
TCCTGGGCGAGGACGAGCTCGCGGCCGGCAAGGTTCGCGTCAAGGAAATG
GGTCTGGAGGACGGACACCCCGAGAAGGAAGGTGTGCTGGTTGATCTGAC
TGCTCTGCCGGCGGAGGTCAAGGCCCGGGTGGCTAAGAAGCGAGGAGAGA
GTGTCGATGGTGTTGCGCAGCAGTTGGGTGAGATGAAGGTTGATGCATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0006427histidyl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0004821histidine-tRNA ligase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
HTS1ASPNIDRAFT_51854Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51854-T1.exon1ASPNIDRAFT_51854-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51854-T1.exon2ASPNIDRAFT_51854-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51854-T1.cdsASPNIDRAFT_51854-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51854-T1ASPNIDRAFT_51854-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR033656
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR015807
DBxrefInterPro:IPR036621
DBxrefInterPro:IPR004516
DBxrefInterPro:IPR004154
DBxrefInterPro:IPR041715
DBxrefPFAM:PF13393
DBxrefPFAM:PF03129
ProductCytoplasmic and mitochondrial histidine tRNA synthetase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:2139984..2141622 +
Powered by Drupal