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ASPNIDRAFT_51934-T1, ASPNIDRAFT_51934-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_51934-T1
Unique NameASPNIDRAFT_51934-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000004.1:1518625..1520214-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_51934-T1 ID=ASPNIDRAFT_51934-T1|Name=ASPNIDRAFT_51934-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1590bp|location=Sequence derived from alignment at ACJE01000004.1:1518625..1520214- (Aspergillus niger ATCC 1015)
CTTGACCTCCGTGGCTTTTCATCTGACCTGACAAGATATTTACGATCTGA
AAGTCGTCGCGATGGCTGCTGTAAGTTCCAATTCCGATGAAATGCGTGGT
GTTCATCACCGCTGACTCTCCCCGACAGCCAATTTCTACCGTCGCGGAGA
CCAAGGAGCTCCGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGA
GGACTCGGTGTCGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGG
GCTGGTGGGCCAGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAA
TGGTCAAGGAAGGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCT
CCTAGCACTGGTAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGG
ATCCGATGTTCCCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGG
AGATGTCCAAGACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGC
GTTCGTATCAAGGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAAT
CCAAATCGACCGCAGTGTTACTGGTGTAAGTGAGGCCTTGGGTGAGCTCT
CATTGACGAACGCTTCTGACATCAGTTATCTTTTAGGGAAACAAACAAGG
CAAGCTCACCATCAAGACGACCGACATGGAAACGATCTACGACATGGGAA
CAAAGATGATCGACTCAATGACCAAGGAACGAGTGATGGCCGGTGACATT
ATCTCCATTGACAAATCCTCGGGCAAGATAACCAAGCTGGGACGTTCTTA
CGCTCGGTCGCGCGACTATGATGCGATGGGAGCGGACACAAAGTTTGTCC
AATGCCCTGAGGGTGAACTCCAGGTTCGCAAGGAAATCGTGCACACCGTC
AGCCTTCATGAGATCGATGTGATCAACTCGCGGTCACAAGGATTCTTGGC
TCTCTTCTCTGGAGATACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGA
TTAACACCAAGGTGGCGGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATC
CCGGGAGTCCTTTTCATTGATGAAGTGCACATGCTTGACATTGAATGCTT
CTCTTACATCAACCGCGCTCTGGAGGCGGAACTGGCACCCATCGTCATCA
TGGCTAGCAACCGGGGCCACGCCCGGATTCGTGGTACGACATACAGCTCT
CCGCACGGCCTTCCCCTGGATTTCCTCGACCGCGTGGTGATTGTCAGCAC
ACAGCCCTACTCTGCCGATGAGATTAGGCAGATTCTGGCGATTCGCGCCC
AGGAGGAAGAGATCGACCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAG
ATCGGCCAGGAGTCGAATCTACGCTACGCCAGCAACATCATCACCACCTC
CCATTTGCTCAGCCAAAAGCGTAAGGCGAAGGAGGTCAGCATTGATGACG
TCCAGCGCAGTTACCGGCTGTTCTACGACCCTGCACGGAGCGTCAAATTC
GTCAGCACATACGAACAGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTT
CATTGCTCCTACAAACGGAGATGCGATGGAGCTTTCATAG
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Coding sequence (CDS) from alignment at ACJE01000004.1:1518625..1520214-

>ASPNIDRAFT_51934-T1 ID=ASPNIDRAFT_51934-T1|Name=ASPNIDRAFT_51934-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4230bp|location=Sequence derived from alignment at ACJE01000004.1:1518625..1520214- (Aspergillus niger ATCC 1015)
GGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACATGGAAACGAT
CTACGACATGGGAACAAAGATGATCGACTCAATGACCAAGGAACGAGTGA
TGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAAGATAACCAAG
CTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGATGGGAGCGGA
CACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTTCGCAAGGAAA
TCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAACTCGCGGTCA
CAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGATCAGGAGTGA
AGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAGGAAGAAGGAA
AAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGTGCACATGCTT
GACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGGCGGAACTGGC
ACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGGATTCGTGGTA
CGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCTCGACCGCGTG
GTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTAGGCAGATTCT
GGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCGGACGCTTTGG
CGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTACGCCAGCAAC
ATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGGCGAAGGAGGT
CAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTACGACCCTGCAC
GGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCATCGGCGATCAA
GGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGATGGAGCTTTC
ATAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGGGGTCTCAACC
TCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGATGCAGACAGC
CTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGGAGAAGGCGAG
GAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGCAAGATTGCCG
GTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAAAACAGCCATC
GCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCTTCACAATGCT
CGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACCGAGGCGCTCA
CGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGAGGAGAGTGAA
ATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCAGTGTTACTGG
TATGGCTGCTGGAAACAAACAAGGCAAGCTCACCATCAAGACGACCGACA
TGGAAACGATCTACGACATGGGAACAAAGATGATCGACTCAATGACCAAG
GAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAATCCTCGGGCAA
GATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGACTATGATGCGA
TGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGAACTCCAGGTT
CGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCGATGTGATCAA
CTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGATACCGGTGAGA
TCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGCGGAGTGGAAG
GAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCATTGATGAAGT
GCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGCGCTCTGGAGG
CGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGGCCACGCCCGG
ATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCCTGGATTTCCT
CGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCCGATGAGATTA
GGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGACCTTTCTCCG
GACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGAATCTACGCTA
CGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAAAAGCGTAAGG
CGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCGGCTGTTCTAC
GACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAACAGCGTTTCAT
CGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAACGGAGATGCGA
TGGAGCTTTCATAGCCAATTTCTACCGTCGCGGAGACCAAGGAGCTCCGG
GGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGACTCGGTGTCGA
TGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTGGTGGGCCAGG
AGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGTCAAGGAAGGC
AAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTAGCACTGGTAA
AACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCCGATGTTCCCT
TCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGATGTCCAAGACC
GAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTCGTATCAAGGA
GGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAAATCGACCGCA
GTGTTACTGGTATGGCTGCTGGAAACAAACAAGGCAAGCTCACCATCAAG
ACGACCGACATGGAAACGATCTACGACATGGGAACAAAGATGATCGACTC
AATGACCAAGGAACGAGTGATGGCCGGTGACATTATCTCCATTGACAAAT
CCTCGGGCAAGATAACCAAGCTGGGACGTTCTTACGCTCGGTCGCGCGAC
TATGATGCGATGGGAGCGGACACAAAGTTTGTCCAATGCCCTGAGGGTGA
ACTCCAGGTTCGCAAGGAAATCGTGCACACCGTCAGCCTTCATGAGATCG
ATGTGATCAACTCGCGGTCACAAGGATTCTTGGCTCTCTTCTCTGGAGAT
ACCGGTGAGATCAGGAGTGAAGTGAGGGATCAGATTAACACCAAGGTGGC
GGAGTGGAAGGAAGAAGGAAAAGCCGAGATTATCCCGGGAGTCCTTTTCA
TTGATGAAGTGCACATGCTTGACATTGAATGCTTCTCTTACATCAACCGC
GCTCTGGAGGCGGAACTGGCACCCATCGTCATCATGGCTAGCAACCGGGG
CCACGCCCGGATTCGTGGTACGACATACAGCTCTCCGCACGGCCTTCCCC
TGGATTTCCTCGACCGCGTGGTGATTGTCAGCACACAGCCCTACTCTGCC
GATGAGATTAGGCAGATTCTGGCGATTCGCGCCCAGGAGGAAGAGATCGA
CCTTTCTCCGGACGCTTTGGCGCTGCTCACCAAGATCGGCCAGGAGTCGA
ATCTACGCTACGCCAGCAACATCATCACCACCTCCCATTTGCTCAGCCAA
AAGCGTAAGGCGAAGGAGGTCAGCATTGATGACGTCCAGCGCAGTTACCG
GCTGTTCTACGACCCTGCACGGAGCGTCAAATTCGTCAGCACATACGAAC
AGCGTTTCATCGGCGATCAAGGTGCCGTTAGCTTCATTGCTCCTACAAAC
GGAGATGCGATGGAGCTTTCATAGCCAATTTCTACCGTCGCGGAGACCAA
GGAGCTCCGGGGTCTCAACCTCATCGCTGCTCATTCACACATTCGAGGAC
TCGGTGTCGATGCAGACAGCCTACAGCCTAGGGCTTCCTCTCAAGGGCTG
GTGGGCCAGGAGAAGGCGAGGAAGGCTGCCGCAGTGATTCTGCAAATGGT
CAAGGAAGGCAAGATTGCCGGTCGCGCGTTGCTGATTGCTGGCCCTCCTA
GCACTGGTAAAACAGCCATCGCCATGGGTATGGCGCAATCCCTCGGATCC
GATGTTCCCTTCACAATGCTCGCAGCGTCGGAGATCTTCTCCATGGAGAT
GTCCAAGACCGAGGCGCTCACGCAAGCCTTCCGCAAATCGATCGGCGTTC
GTATCAAGGAGGAGAGTGAAATCATCGAGGGTGAAGTGGTTGAAATCCAA
ATCGACCGCAGTGTTACTGGTATGGCTGCT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003678DNA helicase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RVB2ASPNIDRAFT_51934Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51934-T1ASPNIDRAFT_51934-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51934-T1.cdsASPNIDRAFT_51934-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51934-T1.exon3ASPNIDRAFT_51934-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51934-T1.exon2ASPNIDRAFT_51934-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_51934-T1.exon1ASPNIDRAFT_51934-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_51934-T1.utr5p1ASPNIDRAFT_51934-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR010339
DBxrefInterPro:IPR041048
DBxrefInterPro:IPR042487
DBxrefInterPro:IPR003593
DBxrefPFAM:PF17856
DBxrefPFAM:PF06068
ProductRuvB-like protein 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000004.1supercontigACJE01000004.1:1518625..1520214 -
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