You are here

Home

ASPNIDRAFT_52207-T1, ASPNIDRAFT_52207-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52207-T1
Unique NameASPNIDRAFT_52207-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1131050..1132916+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52207-T1 ID=ASPNIDRAFT_52207-T1|Name=ASPNIDRAFT_52207-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1867bp|location=Sequence derived from alignment at ACJE01000010.1:1131050..1132916+ (Aspergillus niger ATCC 1015)
CTACGATCGATCTGTCTATCTCTGGTTACTACTCTCCCCACCGTCCATGA
TCCCCGGATTCCGCCGTCAACCCTCCCGTCTATCTGTCAGTTTCAATGTG
GGGGATGCCTTTTCCGTCAAGTGAATTTGGTCTTGTTGACGGTGTTTCGT
ATCCTAGACCTCCAGACATTCGCCCGTACTCTCCCGGCACCATCGACCGT
TGATACTAGCCTTCGCAACCACCGTCCCGTATAGCTAGCTAGCTTCCTAT
CTTCTGGTGATTGGTATCGCTGGAATTCTTTGAAGGCATATTGTTATCGC
ATTCCTGACAGGGCATTATTCTCTTTCCCTGCATCCGCTTTGCCGGTCAA
GGCATGTTGGCACTGTCTTTCGGCGCTGCTCTCATTCAAGACTAGCACAT
GCTAGTCGAGTTTCTTTGCGACATTACATATTTGCCTTCTTTCGCTCATC
CACTATCATCGCCATGGAACTAAACCGGTCGGGACAACATAATGGCCAGA
ATAGTCCGCAGCCTGGCCCTTTTGGCTGTAAGTGATTTCTTTAGTTGTTG
CCATGTCCTGTCTAATATTGAGGGGCTCTAGATTCCTTCCTCTCTCCTAC
AGATACCCCATTCGAACCTGCTCCTGCGCCACCTCCCGGGCCGGCGCTCT
TGGATCACGATGAATCATTGATGTTGGATAACTTCTTCACTACGATGAAC
TCAAATCAACTCTCCAGCGACTTTTGGCTGCCGAGTCAGTCAAACAAGCC
ATTTGGCACCACTAACTTCGACTTCTCTGATGAGCTCCTCCCCCCGACTT
TCGAAGGGTCCACGACATCTCTTTCATCACAGCCATCGCTCTCTCATCGC
AGCATAGACAAGCCGCTTATGGATGTGATGCCTGGGAACCTGGGTGCCAA
CTCAGATATATTCGCGGCTGCTTCCATGCTATACCATAATGGGATGCATG
GGGCCGAATTCAATACTAACTTAGGATCACATTCATATCCATCTCCGGAC
ATAGATTTCAGCAGCCTCAGAATGTCCACTCATGGGAAATTTCAACCGCA
TCCCAGCCATGTGCCCTTGAAACAGCCCAACAGCTCATCCCGTCCTCGGT
TGCCCCATGGGTATCATACCTCTGAGATGCTCTTCGATGTCCGTGAACCG
ATATCGCCTGAACAACAGCAAACCGCCAAGGTTCGTCCACTTCATTGGGG
CTCCGATGAAAGTTTCGTGGATCAAGGTTACATTGCACCGCCGGATCAGC
CAGATGAAGAGCAGCGCACGAAAGAATTGCTCGGTCACTTGGCATGTTTT
GAGGCTCAAAGCAGTGCCGCAAACACTCGAGCGCCGAGTCCAGTGCGTGT
CACTGGAAACTATGATGCGACATGGACGGATACAGATGCGGCTGGACAAC
TCAGCTCTCTGCGCAGAGAGTTCAAAGACAGCATGGAAGATCTTTCCCAA
CCCAAAAAGAAACAAAGAGTTTTGGTTAAGGAAGAAGAAGACGACGACCA
TACGGACGAGGAAAGTTCGCGGCCAAGATTAAAAAAGTCCAAGGCTTCAT
CGTCAAGACGAATGTCACATGACGCCGTCCGGAAGCCAAGGCTTTCTCAA
GGTCCAAAGCCCGCACGAGAGAACCTGACCGAAGAACAGAAAAGAAGCAA
CCATATACTTTCGGAGCAAAAGCGAAGGAACTTGATCAGACAAGGGTTCG
ATGATCTGTGCACGCTTGTTCCTGGCCTAAAAGGCGGCGGCTTCAGCAAG
AGCGCAATGCTCACGCAGGCGGCCGACTGGTTGGAAGAAGTATTGCGCGG
CAATGATATACTCAAAGCACAGCTAGCGGAGCTGAAAGCCATGAATGGCT
TGGTGATGCCCCGGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1131050..1132916+

>ASPNIDRAFT_52207-T1 ID=ASPNIDRAFT_52207-T1|Name=ASPNIDRAFT_52207-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2658bp|location=Sequence derived from alignment at ACJE01000010.1:1131050..1132916+ (Aspergillus niger ATCC 1015)
ATGGAACTAAACCGGTCGGGACAACATAATGGCCAGAATAGTCCGCAGCC
TGGCCCTTTTGGCTATACCCCATTCGAACCTGCTCCTGCGCCACCTCCCG
GGCCGGCGCTCTTGGATCACGATGAATCATTGATGTTGGATAACTTCTTC
ACTACGATGAACTCAAATCAACTCTCCAGCGACTTTTGGCTGCCGAGTCA
GTCAAACAAGCCATTTGGCACCACTAACTTCGACTTCTCTGATGAGCTCC
TCCCCCCGACTTTCGAAGGGTCCACGACATCTCTTTCATCACAGCCATCG
CTCTCTCATCGCAGCATAGACAAGCCGCTTATGGATGTGATGCCTGGGAA
CCTGGGTGCCAACTCAGATATATTCGCGGCTGCTTCCATGCTATACCATA
ATGGGATGCATGGGGCCGAATTCAATACTAACTTAGGATCACATTCATAT
CCATCTCCGGACATAGATTTCAGCAGCCTCAGAATGTCCACTCATGGGAA
ATTTCAACCGCATCCCAGCCATGTGCCCTTGAAACAGCCCAACAGCTCAT
CCCGTCCTCGGTTGCCCCATGGGTATCATACCTCTGAGATGCTCTTCGAT
GTCCGTGAACCGATATCGCCTGAACAACAGCAAACCGCCAAGGTTCGTCC
ACTTCATTGGGGCTCCGATGAAAGTTTCGTGGATCAAGGTTACATTGCAC
CGCCGGATCAGCCAGATGAAGAGCAGCGCACGAAAGAATTGCTCGGTCAC
TTGGCATGTTTTGAGGCTCAAAGCAGTGCCGCAAACACTCGAGCGCCGAG
TCCAGTGCGTGTCACTGGAAACTATGATGCGACATGGACGGATACAGATG
CGGCTGGACAACTCAGCTCTCTGCGCAGAGAGTTCAAAGACAGCATGGAA
GATCTTTCCCAACCCAAAAAGAAACAAAGAGTTTTGGTTAAGGAAGAAGA
AGACGACGACCATACGGACGAGGAAAGTTCGCGGCCAAGATTAAAAAAGT
CCAAGGCTTCATCGTCAAGACGAATGTCACATGACGCCGTCCGGAAGCCA
AGGCTTTCTCAAGGTCCAAAGCCCGCACGAGAGAACCTGACCGAAGAACA
GAAAAGAAGCAACCATATACTTTCGGAGCAAAAGCGAAGGAACTTGATCA
GACAAGGGTTCGATGATCTGTGCACGCTTGTTCCTGGCCTAAAAGGCGGC
GGCTTCAGCAAGAGCGCAATGCTCACGCAGGCGGCCGACTGGTTGGAAGA
AGTATTGCGCGGCAATGATATACTCAAAGCACAGCTAGCGGAGCTGAAAG
CCATGAATGGCTTGGTGATGCCCCGGTAGATGGAACTAAACCGGTCGGGA
CAACATAATGGCCAGAATAGTCCGCAGCCTGGCCCTTTTGGCTATACCCC
ATTCGAACCTGCTCCTGCGCCACCTCCCGGGCCGGCGCTCTTGGATCACG
ATGAATCATTGATGTTGGATAACTTCTTCACTACGATGAACTCAAATCAA
CTCTCCAGCGACTTTTGGCTGCCGAGTCAGTCAAACAAGCCATTTGGCAC
CACTAACTTCGACTTCTCTGATGAGCTCCTCCCCCCGACTTTCGAAGGGT
CCACGACATCTCTTTCATCACAGCCATCGCTCTCTCATCGCAGCATAGAC
AAGCCGCTTATGGATGTGATGCCTGGGAACCTGGGTGCCAACTCAGATAT
ATTCGCGGCTGCTTCCATGCTATACCATAATGGGATGCATGGGGCCGAAT
TCAATACTAACTTAGGATCACATTCATATCCATCTCCGGACATAGATTTC
AGCAGCCTCAGAATGTCCACTCATGGGAAATTTCAACCGCATCCCAGCCA
TGTGCCCTTGAAACAGCCCAACAGCTCATCCCGTCCTCGGTTGCCCCATG
GGTATCATACCTCTGAGATGCTCTTCGATGTCCGTGAACCGATATCGCCT
GAACAACAGCAAACCGCCAAGGTTCGTCCACTTCATTGGGGCTCCGATGA
AAGTTTCGTGGATCAAGGTTACATTGCACCGCCGGATCAGCCAGATGAAG
AGCAGCGCACGAAAGAATTGCTCGGTCACTTGGCATGTTTTGAGGCTCAA
AGCAGTGCCGCAAACACTCGAGCGCCGAGTCCAGTGCGTGTCACTGGAAA
CTATGATGCGACATGGACGGATACAGATGCGGCTGGACAACTCAGCTCTC
TGCGCAGAGAGTTCAAAGACAGCATGGAAGATCTTTCCCAACCCAAAAAG
AAACAAAGAGTTTTGGTTAAGGAAGAAGAAGACGACGACCATACGGACGA
GGAAAGTTCGCGGCCAAGATTAAAAAAGTCCAAGGCTTCATCGTCAAGAC
GAATGTCACATGACGCCGTCCGGAAGCCAAGGCTTTCTCAAGGTCCAAAG
CCCGCACGAGAGAACCTGACCGAAGAACAGAAAAGAAGCAACCATATACT
TTCGGAGCAAAAGCGAAGGAACTTGATCAGACAAGGGTTCGATGATCTGT
GCACGCTTGTTCCTGGCCTAAAAGGCGGCGGCTTCAGCAAGAGCGCAATG
CTCACGCAGGCGGCCGACTGGTTGGAAGAAGTATTGCGCGGCAATGATAT
ACTCAAAGCACAGCTAGCGGAGCTGAAAGCCATGAATGGCTTGGTGATGC
CCCGGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0046983protein dimerization activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52207ASPNIDRAFT_52207Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52207-T1.utr5p1ASPNIDRAFT_52207-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52207-T1.exon1ASPNIDRAFT_52207-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52207-T1.exon2ASPNIDRAFT_52207-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52207-T1.cdsASPNIDRAFT_52207-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52207-T1ASPNIDRAFT_52207-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036638
DBxrefInterPro:IPR011598
DBxrefPFAM:PF00010
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1131050..1132916 +
Powered by Drupal