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ASPNIDRAFT_52219-T1, ASPNIDRAFT_52219-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52219-T1
Unique NameASPNIDRAFT_52219-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1246497..1247816+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52219-T1 ID=ASPNIDRAFT_52219-T1|Name=ASPNIDRAFT_52219-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1320bp|location=Sequence derived from alignment at ACJE01000010.1:1246497..1247816+ (Aspergillus niger ATCC 1015)
CTTTCTTGTCTTTCCTTTCCCAGCTTCTCTCTAGTCCTTCCTTAATCGTA
CCCGGTTGATCCAGGTTCCATTCCTTCATTATCATCATGCATTTCCTCCA
GAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTC
CTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCC
GGCAAGTCCTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCCCGC
TGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTACGTC
TTCTCTAGCTCCCATAGTACTCTTCCTACTCCGATTGGACCAACTAACTC
TCTTCCCTCACAGGTCATCTTCGAGGGTGAGACCACCTTCGGCTACAAGG
AATGGAAGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAG
CAGGCCTCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGG
CAAGGGTAGCAACGGTGGCAAGACCAAGCCCAAGTTCTTCCAGGCCCACA
AGCTCGACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTC
CAGGGTTTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCAT
CGACAACTCCGCCGGTACCAGCAAGGGTCACAACACCGATGCCTTTGACA
TTGGCCAGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAG
GATGACTGCCTGGCCATCAACTCGGGTGAGGTATGTATATGTCTTGCCCC
ATCGCGCTGCCACTGTCCCGTAGCCACACGTGATTAGAGACTGACTAGAA
CACAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTC
TCCATCGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGAC
CATCTCCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCGCATCAAGA
CCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATC
ACCCTGTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGA
GAACGGCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGTTGAGGACA
TCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATC
TACATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGT
TGATGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGTCCCCTCGG
GCGCTTCCTGCAGCGATTAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:1246497..1247816+

>ASPNIDRAFT_52219-T1 ID=ASPNIDRAFT_52219-T1|Name=ASPNIDRAFT_52219-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3267bp|location=Sequence derived from alignment at ACJE01000010.1:1246497..1247816+ (Aspergillus niger ATCC 1015)
ATGCATTTCCTCCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCT
GGCCGCCGCTGCTCCTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCT
CTGCTGCCAAGTCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAAC
ATCGCGGTCCCCGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGG
TACCACCGTCATCTTCGAGGGTGAGACCACCTTCGGCTACAAGGAATGGA
AGGGTCCCCTGATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCC
TCCGGTGCCAAGATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGG
TAGCAACGGTGGCAAGACCAAGCCCAAGTTCTTCCAGGCCCACAAGCTCG
ACCAGTCCAGCATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGT
TTCAGCATTCTGGCCGACCACCTGACCATCACCGATGTGACCATCGACAA
CTCCGCCGGTACCAGCAAGGGTCACAACACCGATGCCTTTGACATTGGCC
AGAGTACCTACATCACCATTGACGGTGCCACCGTCTACAACCAGGATGAC
TGCCTGGCCATCAACTCGGGTGAGCACATCACCTTCACCAACGGCTACTG
TGATGGTGGCCACGGTCTCTCCATCGGTTCCATCGGTGGCCGCAGTGACA
ACACCGTCAACGACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAG
AACGGTGTCCGCATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAA
CGTCAAGTTTGAGGACATCACCCTGTCCGACATCAGCAAGTACGGTATTG
TCGTTGAGCAGGACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAAC
GGTGTCAAGGTTGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAA
GAGCTCTGGTACTGACATCTACATCCTGTGCGGTTCCGGCAGCTGCTCGA
ACTGGACCTGGAGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAG
TGCAAGAACGTCCCCTCGGGCGCTTCCTGCAGCGATTAAATGCATTTCCT
CCAGAACGCCGTTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTG
CTCCTCTCGAGAAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAG
TCCGGCAAGTCCTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCC
CGCTGGTGAGACTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTCA
TCTTCGAGGGTGAGACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTG
ATCTCCATGTCCGGTACCGACATCACCGTCAAGCAGGCCTCCGGTGCCAA
GATCAACTGCGACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTG
GCAAGACCAAGCCCAAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGC
ATCACCGGCCTGAAGGTCTACAACACCCCTGTCCAGGGTTTCAGCATTCT
GGCCGACCACCTGACCATCACCGATGTGACCATCGACAACTCCGCCGGTA
CCAGCAAGGGTCACAACACCGATGCCTTTGACATTGGCCAGAGTACCTAC
ATCACCATTGACGGTGCCACCGTCTACAACCAGGATGACTGCCTGGCCAT
CAACTCGGGTGAGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCC
ACGGTCTCTCCATCGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAAC
GACGTGACCATCTCCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCG
CATCAAGACCATCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTG
AGGACATCACCCTGTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAG
GACTACGAGAACGGCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGT
TGAGGACATCACTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTA
CTGACATCTACATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGG
AGCGGTGTTGATGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGT
CCCCTCGGGCGCTTCCTGCAGCGATTAAATGCATTTCCTCCAGAACGCCG
TTGTGGCCGCCACTATGGGCGCTGCGCTGGCCGCCGCTGCTCCTCTCGAG
AAGCGCTCCTGCACTTTCACCTCCGCCTCTGCTGCCAAGTCCGGCAAGTC
CTCTTGCTCCACCATCACCCTCGACAACATCGCGGTCCCCGCTGGTGAGA
CTCTTGACTTGACTGGCCTCAAGAAGGGTACCACCGTCATCTTCGAGGGT
GAGACCACCTTCGGCTACAAGGAATGGAAGGGTCCCCTGATCTCCATGTC
CGGTACCGACATCACCGTCAAGCAGGCCTCCGGTGCCAAGATCAACTGCG
ACGGTGCTCGCTGGTGGGACGGCAAGGGTAGCAACGGTGGCAAGACCAAG
CCCAAGTTCTTCCAGGCCCACAAGCTCGACCAGTCCAGCATCACCGGCCT
GAAGGTCTACAACACCCCTGTCCAGGGTTTCAGCATTCTGGCCGACCACC
TGACCATCACCGATGTGACCATCGACAACTCCGCCGGTACCAGCAAGGGT
CACAACACCGATGCCTTTGACATTGGCCAGAGTACCTACATCACCATTGA
CGGTGCCACCGTCTACAACCAGGATGACTGCCTGGCCATCAACTCGGGTG
AGCACATCACCTTCACCAACGGCTACTGTGATGGTGGCCACGGTCTCTCC
ATCGGTTCCATCGGTGGCCGCAGTGACAACACCGTCAACGACGTGACCAT
CTCCAACTCCAAGGTGCTCAACTCCCAGAACGGTGTCCGCATCAAGACCA
TCTACGGCAAGACTGGCACTGTCGAGAACGTCAAGTTTGAGGACATCACC
CTGTCCGACATCAGCAAGTACGGTATTGTCGTTGAGCAGGACTACGAGAA
CGGCAGCCCCACCGGCACGCCCACCAACGGTGTCAAGGTTGAGGACATCA
CTTTCAAGAAGGTCACCGGCAGCGTCAAGAGCTCTGGTACTGACATCTAC
ATCCTGTGCGGTTCCGGCAGCTGCTCGAACTGGACCTGGAGCGGTGTTGA
TGTGACTGGCGGCAAGAAGAGCAGCAAGTGCAAGAACGTCCCCTCGGGCG
CTTCCTGCAGCGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004650polygalacturonase activity
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52219ASPNIDRAFT_52219Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52219-T1.utr5p1ASPNIDRAFT_52219-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52219-T1.exon1ASPNIDRAFT_52219-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52219-T1.exon2ASPNIDRAFT_52219-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52219-T1.exon3ASPNIDRAFT_52219-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52219-T1.cdsASPNIDRAFT_52219-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52219-T1ASPNIDRAFT_52219-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-18)
NoteCAZy:GH28
DBxrefInterPro:IPR011050
DBxrefInterPro:IPR012334
DBxrefInterPro:IPR000743
DBxrefInterPro:IPR006626
DBxrefPFAM:PF00295
Productendo-polygalacturonase B
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1246497..1247816 +
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