You are here

Home

ASPNIDRAFT_52224-T1, ASPNIDRAFT_52224-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52224-T1
Unique NameASPNIDRAFT_52224-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1312723..1314105+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52224-T1 ID=ASPNIDRAFT_52224-T1|Name=ASPNIDRAFT_52224-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1383bp|location=Sequence derived from alignment at ACJE01000010.1:1312723..1314105+ (Aspergillus niger ATCC 1015)
ATGCCCCACAGTGTCCCCGCGTTCCTGCATCATGCTGATCGCTTCATCAC
AGGCCCTCCATATCCTCCCTACACAGGCCCGCCGCAGGGCTACAATCAAC
AACCGAACCCATCACCATTTCCTCCTCAGAACCAGCAACACATGGCCGCG
CCGCCTTACCCGAACCAGCCTGGCTACCCTCCCTACGGCGCTCCACATCC
CAATCAGCCTCCATATCCTAATACCCCACCAGGTGCTCCTCCAGGTCGAC
AAGATATGTACCACGGGGGTCCACAAGGGTATTCGCAAGGCTTGCCTCCT
CCCCAAGGCGCTCCTCATGGACCTCCACAAGGCATGCCTCAAGGATCATT
CGGTGCAGCACCTCCCTTTCCACCTCACCCCGCCGCTCCACCACACCCTC
AACTTTATGCCCCGCTTGCATCCGTGCCATCGTTGGGCTACGTTCGAGGT
CAACAAGCAAATGGAGACTTCCGACCCCAAGCCGATCAGCTCCGTCGCGC
AATGAAAGGCTTCGGGACAGACGAGAAGACCCTGATTCAGGTTCTCGCCA
AGCTAGACCCTCTCCAAATGGCCGCCGTACGATCCACTTACACACAGCAC
ATCCGACGAGATCTCTACAAGGACGTTAAAGGCGAGACAAGCGGCTACTT
TCGTCGGGGTCTCCTAGCCATCATTGATGGCCCGTTGCAGTACGATGTAG
CCTGCGCCAGAGAAGCTGTCGAAGGCATTGGCACGAAGGAATGGCTTCTC
AACGACATCCTTCTATCCCGGTCCAATGCTGATATGAACGCCATAAAGGC
CGCTTATCAGCAAACATACCACCGCGCTCTCGAAAAGGACGTTGAAGGTG
ACTTGTCATTCAAAACCCGGAATTTGTTCTCCCTGGTGCTTCGCGCCACT
CGACACGAGGAATCAGCCCCATTAGACCCGCAACTTATCGAAGCAGAAGC
CAAGTCTCTCCATCAAGCAACGGCTGCGCGAATGGTCAACAATGTTGATG
AAGTATGCGGTATCATAGCCAGGGCCTCGGATAACGAGCTTCGTGCTATC
AATCATGCGTTCTATACCCGGTACAATATCCACTTGACCAAGCATATCGA
GAAAGAGTTTTCTGGACACATGAAGGATGCACTGTTGCATATGCTCGGTG
CTGCGTTGGATCCGGCCATGCACGACGCGGAGCAGCTCGAAGACTGCATG
AAGGGAATGGGAACCAAGGACGAGAAACTGGTAACCAGAGTGGTCCGCAT
ACACTGGGCGCCTGGGCACTTGGATCAGGTGAAACGGGCATATCGCCATC
GGTTCCAGAAAGATCTTATCGAGCGGGTCAGGGGGGAGACGAGTGGTGAT
TACCAGCGATTGATGGTGGCGTTATTGCAGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1312723..1314105+

>ASPNIDRAFT_52224-T1 ID=ASPNIDRAFT_52224-T1|Name=ASPNIDRAFT_52224-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1383bp|location=Sequence derived from alignment at ACJE01000010.1:1312723..1314105+ (Aspergillus niger ATCC 1015)
ATGCCCCACAGTGTCCCCGCGTTCCTGCATCATGCTGATCGCTTCATCAC
AGGCCCTCCATATCCTCCCTACACAGGCCCGCCGCAGGGCTACAATCAAC
AACCGAACCCATCACCATTTCCTCCTCAGAACCAGCAACACATGGCCGCG
CCGCCTTACCCGAACCAGCCTGGCTACCCTCCCTACGGCGCTCCACATCC
CAATCAGCCTCCATATCCTAATACCCCACCAGGTGCTCCTCCAGGTCGAC
AAGATATGTACCACGGGGGTCCACAAGGGTATTCGCAAGGCTTGCCTCCT
CCCCAAGGCGCTCCTCATGGACCTCCACAAGGCATGCCTCAAGGATCATT
CGGTGCAGCACCTCCCTTTCCACCTCACCCCGCCGCTCCACCACACCCTC
AACTTTATGCCCCGCTTGCATCCGTGCCATCGTTGGGCTACGTTCGAGGT
CAACAAGCAAATGGAGACTTCCGACCCCAAGCCGATCAGCTCCGTCGCGC
AATGAAAGGCTTCGGGACAGACGAGAAGACCCTGATTCAGGTTCTCGCCA
AGCTAGACCCTCTCCAAATGGCCGCCGTACGATCCACTTACACACAGCAC
ATCCGACGAGATCTCTACAAGGACGTTAAAGGCGAGACAAGCGGCTACTT
TCGTCGGGGTCTCCTAGCCATCATTGATGGCCCGTTGCAGTACGATGTAG
CCTGCGCCAGAGAAGCTGTCGAAGGCATTGGCACGAAGGAATGGCTTCTC
AACGACATCCTTCTATCCCGGTCCAATGCTGATATGAACGCCATAAAGGC
CGCTTATCAGCAAACATACCACCGCGCTCTCGAAAAGGACGTTGAAGGTG
ACTTGTCATTCAAAACCCGGAATTTGTTCTCCCTGGTGCTTCGCGCCACT
CGACACGAGGAATCAGCCCCATTAGACCCGCAACTTATCGAAGCAGAAGC
CAAGTCTCTCCATCAAGCAACGGCTGCGCGAATGGTCAACAATGTTGATG
AAGTATGCGGTATCATAGCCAGGGCCTCGGATAACGAGCTTCGTGCTATC
AATCATGCGTTCTATACCCGGTACAATATCCACTTGACCAAGCATATCGA
GAAAGAGTTTTCTGGACACATGAAGGATGCACTGTTGCATATGCTCGGTG
CTGCGTTGGATCCGGCCATGCACGACGCGGAGCAGCTCGAAGACTGCATG
AAGGGAATGGGAACCAAGGACGAGAAACTGGTAACCAGAGTGGTCCGCAT
ACACTGGGCGCCTGGGCACTTGGATCAGGTGAAACGGGCATATCGCCATC
GGTTCCAGAAAGATCTTATCGAGCGGGTCAGGGGGGAGACGAGTGGTGAT
TACCAGCGATTGATGGTGGCGTTATTGCAGTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005544calcium-dependent phospholipid binding
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52224ASPNIDRAFT_52224Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52224-T1.exon1ASPNIDRAFT_52224-T1.exon1Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52224-T1.cdsASPNIDRAFT_52224-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52224-T1ASPNIDRAFT_52224-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR037104
DBxrefInterPro:IPR018502
DBxrefInterPro:IPR001464
DBxrefPFAM:PF00191
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1312723..1314105 +
Powered by Drupal