You are here

Home

ASPNIDRAFT_52294-T1, ASPNIDRAFT_52294-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52294-T1
Unique NameASPNIDRAFT_52294-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:1804483..1807431-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52294-T1 ID=ASPNIDRAFT_52294-T1|Name=ASPNIDRAFT_52294-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2949bp|location=Sequence derived from alignment at ACJE01000010.1:1804483..1807431- (Aspergillus niger ATCC 1015)
ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGG
TGCTTTTCACCAAGCGACCATTGATCCTTCTGCGGCATTCCTCCATACCT
CTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG
CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAA
AAGGCCGCGACCAGAGGATGCCATGTCGATGTCGCCTCGACAGGCTCCCG
GGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTTCA
GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGAC
TCCGTATCAGCACCTCCAGCAAGGAGCCTCTCCGAACGTCACCCAATCTC
CGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT
TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTC
TCCGTCACAGTCGGATCATCCGAGTAGGGTGAACACGCCGCAAAATAGCT
CATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG
CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACA
TTACGGTGGCATGCCTCAGGGGTATCAGCAGGCCATAGCTGCCCAGCAGC
AACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG
GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGC
GATGGCCAATCCTCAACAAATGGCCGCCATCAGGCAGATGCAACAGACCA
TGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC
ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCG
CCCGATCAACCTGGTCCAGCTTTATGCTACGGTCATGAAGCTCGGAGGAT
CGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT
CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCA
TTATCAGCGGAACCTAGCTGCGTACGAGCAGGCCTTCCTCAGCACCCAGC
AGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC
AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCA
GGGTTTCGAAAATGCACAGCAGATGGGACACCCATCGCCAAGCCCCGCGT
CTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT
ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTAT
TTCCCGCCAGTCACAGCCTCCAGCAACGCCCAATGATCCTACTGGCCAAA
TGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC
GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCA
GATTGAGGATCCCTATAAACCCATGGTCTTGCCAGAAAGCAATTTCCATG
GACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC
TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCA
CGCTCTCACAATGAGCATCAAATCCGGGATACATGCTGAAATGCGCATGG
CCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG
TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGA
CCAAGCAGAGTTTCTTGCGGAACATGCCGCAGAAGTGTCTGATATGATGC
TTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG
TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCG
TGCCGTCGACCGACTCATCTGCATTACAACCATACTACGCAATTTCTCGT
TTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC
ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGAC
ACATCAGAACACATTGGATTTCATGAAGGACACAGTAACATACCTCAGCA
ACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT
CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGA
GGGTATTATGTTCAATTCATACAACCCCTCAGTTCACAAGTACACACCGG
CAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG
ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGA
GTTGCTGACTCGTGCCTTTGGTCTTGCCATTTGCCCGGTCCCTGATCAGC
CGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA
GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGC
CAAGTCATGGCTGGAGTCGATCGACGGGTTTGCCATCCATCTCCTGCGAC
TCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA
CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTA
CAGCTCCATAATCAATCGGGGTTTGGCGATTCTGCGTCGATTGGCCGAGA
AGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC
ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGA
CCCTGGTGTTGTACGGCAATTGATAACTTATGCACGACTAGCGGAATGA
back to top

Coding sequence (CDS) from alignment at ACJE01000010.1:1804483..1807431-

>ASPNIDRAFT_52294-T1 ID=ASPNIDRAFT_52294-T1|Name=ASPNIDRAFT_52294-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2949bp|location=Sequence derived from alignment at ACJE01000010.1:1804483..1807431- (Aspergillus niger ATCC 1015)
ATGAATGCCTGGCTAGCCGACGCCTCGAACCTTCCGAACCATGACAATGG
TGCTTTTCACCAAGCGACCATTGATCCTTCTGCGGCATTCCTCCATACCT
CTCCCACTCCCGACCCTACCCAGTTCCAGCGCATGTTCAATGGCGTGCCG
CGAAATGCCTCCCCTGGCTTCCACAACCCGAACCAGGTGATTCCGTCCAA
AAGGCCGCGACCAGAGGATGCCATGTCGATGTCGCCTCGACAGGCTCCCG
GGGCTATCGCGGCATCCCGGTCCCAGACTCCTCACCAAGTGCCTTTTTCA
GGGTACCAAGGAGCTGCGAATGGCGCGCCTCAATATCCTCCGCATCCGAC
TCCGTATCAGCACCTCCAGCAAGGAGCCTCTCCGAACGTCACCCAATCTC
CGATCATGCAGGAATTCGACCAACACGGTGTACAACGAATGGGAACAGCT
TCGCCTAGCCCGTTCTCCCCAGCCGGCCCTCAAGTAGGCTCCCACATGTC
TCCGTCACAGTCGGATCATCCGAGTAGGGTGAACACGCCGCAAAATAGCT
CATTCATGCCCAATCAACCTTTCCCTCAGCCCATGGCACCCCAGTTCCCG
CCCGCGCCTGCGATGACTACTGCCGCTGTGCAGGCGCCGATGCAAGCACA
TTACGGTGGCATGCCTCAGGGGTATCAGCAGGCCATAGCTGCCCAGCAGC
AACAGCAGCGAATGCATGCCATGCAGATGCAAAATCAAGGTCGTCCAATG
GCGATGAATCCCGCCATGGCCGGGCGACCCGTGGCAGCTGGGATGAACGC
GATGGCCAATCCTCAACAAATGGCCGCCATCAGGCAGATGCAACAGACCA
TGGCTAAACCGCCTAATCCGGAAGGGTTTATGAGGTCACTGCAGAAATTC
ATGATGTCGCGCAACCTGCCGCTCGATCCTAGTCCCGTTGTTTGCGGTCG
CCCGATCAACCTGGTCCAGCTTTATGCTACGGTCATGAAGCTCGGAGGAT
CGAAGAAGATAACAGCTGCGAATATGTGGCACGTCATTGCACAGCAACTT
CAGTTCCCGCCGATGCAGCTGCCGATGGCCATGCAGGAGCTTAGGGAGCA
TTATCAGCGGAACCTAGCTGCGTACGAGCAGGCCTTCCTCAGCACCCAGC
AGAAGCAATTTGCGGACCAAATGCAGCAAACAGCGGTGCCACGTCAACCC
AGTGACCCATCTGCCATGCAGTTCCAGTCTCCAGCCATCAAACCGGGCCA
GGGTTTCGAAAATGCACAGCAGATGGGACACCCATCGCCAAGCCCCGCGT
CTGTATCAAGTAGCGTACAACATAACGCTTCGAATGGTTTCGCGACGCCT
ACGCCTGTTAAAACCCAGGGCAAGCCGCAGAATCAGCATCGTCTCAGTAT
TTCCCGCCAGTCACAGCCTCCAGCAACGCCCAATGATCCTACTGGCCAAA
TGCCGAGTCAATCACCTGCGCAGCCGGGCAAAGGCCCAGGTCAAGTCCCC
GGCAAGCCCTCGGAGCAGCTGGATCAGTCAGATCAGCCTTTGAAGCACCA
GATTGAGGATCCCTATAAACCCATGGTCTTGCCAGAAAGCAATTTCCATG
GACCCATAGCCATCGATGAAATGTATCAGATTGGGGAGGATATTACTCGC
TTGAAGCCTAATGTTCCCAGTTTTGCTGAGCTGGGTGTAATTGATATCCA
CGCTCTCACAATGAGCATCAAATCCGGGATACATGCTGAAATGCGCATGG
CCTTGGATACGCTTACATCCATATCCTCAGAGCCGGCGATCCAAATATCG
TTAGATAACTGCGACGATCTGGTGGAGAGCTTGATCGAATGCGCCGAGGA
CCAAGCAGAGTTTCTTGCGGAACATGCCGCAGAAGTGTCTGATATGATGC
TTCTATCCTCATATGAAGAAGTCACTCGTGGATGTCAATCGGAATGGACG
TCTTTGGCGGATGTTCCAGAATTCGGCAGCCTCGACTACGAACTAGACCG
TGCCGTCGACCGACTCATCTGCATTACAACCATACTACGCAATTTCTCGT
TTATCGAGTCAAACTTTGGAATGCTGTCTACGCCCCCGGTTGTTCAATTC
ATGTCGACTATCATTCGTTACCTCGGCACACGCAATATGCTTCTAAGGAC
ACATCAGAACACATTGGATTTCATGAAGGACACAGTAACATACCTCAGCA
ACGTGGCTCACACCATTCAGTTACCGAGTAAAGAAGAAGCCCTCTGTCTT
CTGCATTTCCTTCTTGCTTTTGCACCATTCCCAGGACCTATGGGCTCGGA
GGGTATTATGTTCAATTCATACAACCCCTCAGTTCACAAGTACACACCGG
CAGCGGTTGATAGCTTGGCCAAGCTTCTGGCACGGGACGAGCCCAACCGG
ACATTCTTCAGAGCAATCTTCTCTGGCGATGGCGTTTCCATCCAGCAAGA
GTTGCTGACTCGTGCCTTTGGTCTTGCCATTTGCCCGGTCCCTGATCAGC
CGCGGAAACCCTTGGCTATAGCGGATGCTCGGAAGGTTTTCCTCATGCAA
GGCCTTTTGGCAGCGGATATCCTTTCAGGTTTTGCGGATGGGCCTATTGC
CAAGTCATGGCTGGAGTCGATCGACGGGTTTGCCATCCATCTCCTGCGAC
TCTCATGCCTCCTGAGCACGGAACGCGTTCCTCCACCGAACACCAACTCA
CGCCAATCCCATGCCGCAAGAGGCCAAGCGGAAGCGGAAGCTGCTGCTTA
CAGCTCCATAATCAATCGGGGTTTGGCGATTCTGCGTCGATTGGCCGAGA
AGTCGAAGCTTGCTGATTCCAACGCCACGTTACGGTTCCCCTCGGGGATC
ATCCCAAGGAAAGAAAGCTTGCTTGGCGCACTGCTGATGCCTAGCATAGA
CCCTGGTGTTGTACGGCAATTGATAACTTATGCACGACTAGCGGAATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52294ASPNIDRAFT_52294Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52294-T1.cdsASPNIDRAFT_52294-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52294-T1.exon1ASPNIDRAFT_52294-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52294-T1ASPNIDRAFT_52294-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036431
DBxrefInterPro:IPR001606
DBxrefPFAM:PF01388
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:1804483..1807431 -
Powered by Drupal