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ASPNIDRAFT_52343-T1, ASPNIDRAFT_52343-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52343-T1
Unique NameASPNIDRAFT_52343-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2250667..2252992-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52343-T1 ID=ASPNIDRAFT_52343-T1|Name=ASPNIDRAFT_52343-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2326bp|location=Sequence derived from alignment at ACJE01000010.1:2250667..2252992- (Aspergillus niger ATCC 1015)
ATGCGTGCTCCCATTCCCCCACGGAGCGGCCCAAGGCCACCTATGGGAAG
ACTGGCCAGTCTGAAATCGCCCAATCCAACTCCCATCAGGCGTCCCCAGC
CAATTTCTCGGCCTCAACCCGCCAGGCCAACTACCCACCCCAAAACCTCA
ACTTGCCCTAACCCGGGCTGTCCTGCTCCTCACATCGTTGAGGATGACGG
TCAGAAGGTTTGTTCCGGGTGTGGTACTGTCATCAGTGAAGCAAACATCG
TCTCCGAAGTGACTTTCGGGGAATCGTCGTCGGGTGCGGCAGTCGTTCAG
GGTACCTTCGTCGGCGAAGATCAGTCCCATGTCCGCAGTTATGGCCCTGG
CTTTCAGCGTGGAGGCGCTGAAAGTCGCGAGATTACGGAACAGAACGGCA
ATCGGTACATCACCCAGCTGTCTCGTGCCTTGACTATCCCAGAGAGTGCC
ATGAAGGCTGCTGGTCAAGTGTTCAAGCTAGCAGTCGGATTGAACTTCAT
TCAAGGTCGAAGGACCAAGACTGTAGCTGCTGTATGCTTATATATTGCCT
GCCGTCGGCAGGATGGCAACACCATCATGCTCATCGATTTTGCCGATGTT
CTCATGATCAACGTGTTCAAGCTCGGTCGGACCTACAAAGCACTACTCGA
TGAGTTGCGTCTGGGTGGTAACGTGTTTCTGATGAACCCGATTGATCCGG
AGAGTTTGATCTACAGGTTTGCCAAACAGCTTGAATTTGGGTCGGCTACT
ATGCAGGTGGCGAGTGAGGCGGTCCGTATCGTACAGCGAATGAACCGCGA
TTGGATGACGACGGGTCGTCGTCCCGCTGGTATTTGTGGTGCCGCCTTGA
TCCTTGCAGCCCGAATGAACAACTTTCGCCGCACCGTTCGAGAGGTTGTC
TACGTCGTCAAAGTCACCGAGATCACTATCAGCCAACGTTTGAACGAGTT
CAGCTCCACCGAAAGTGGTGAACTTACAGTCGACCAGTTCCGTTCCGTGC
AGCTGGAGAATGCGCATGACCCACCTTCTTTTGCCAGGGCTAGAGAAGGA
AGGAAGCCTTCACGCTCATTCAAGAGACGGCCCACGGAAACGGCTGCGGA
GATTGAGGGTGATATACAAGAAGCACAGCAACATAGGCGTGTCGACTCAG
ACGGCTTCGCTATTCCTAGTCTTCCTATTGACCCGGCATTACTAGCGGCC
AGCGGCGGTCAACGTCGCCATTCGACTGCCTCTGCTGCAAGCGAAGCCAT
TTCGGACGCTGGCGAGGAGCACGCCAAGTCCGGTCGCCAGAAGGGTCCGA
AGAGACCTCCGCTTCCAGCCCCTTCGCCAGATCAGATTGCCTCGGAAGAG
GCTTTGGAGAATGAAATGACCGCGCTATTATCCAAAGGATCGAACATGTT
CGAGTCTAGTGCCGGTCCTCCAAAGAAGGTCGTGTCTGATAATACGGAGA
TTGACGCTGCTGAGTTTGAGTCGGATCCGGAGGTGTCTAACTGCTTGCTC
TCTCCTGCAGAAGTTGAGATCAAAGAACGGATTTGGGTCCATGAGAATAA
AGATTATCTCCGGGCCCAGCAGGCCAAAGCGCTAAAGCGAGCTCTGGCGG
AGGCTGATTCCCACCCTGGCGCGGACGGTCGCGTGCACAAGCCGCGAAAG
CGCCGCCGCGGTAGACTTGGCGACGTAACTTATCTTGAAGGCGAGGGTGA
AGATGGGGATGGCCGCAGCACTCGGGCTTCGACCCCTGCCGAAGCTACCC
GCCGGATGTTGGAAAGAAGAGGGTTCAGCAAAAAGATCAATTATCGTCTT
TTGGAGTCACTCTTCGGCGATGAGGGGGCTGACGAAGCCTCCAAACCTAA
GGAAGAGAGTTTGAGCCGAAGCCAGAGTCGCAGCCAGAGTGTCGTGTCAC
GACGCAGCGCCAGTATCGAACCAGAGGCGGCCTCGAGGCGTACCGGGCTT
CTAACCCCCTCAGCTAGCCAACCTGCTGGAGCTTCTTTGTCTGCCGCGGC
TCCGGCGCGTGGCTCAGCGGTACCCGCTGCTCAAGCCCCGACGGATCAAG
GTGGAAAAGCAAGTGAGAATGAGCAAGTCCTCGGTCCTGCGGATGGAGCA
AAGAACGAGTATTCAGATGACGAGCAAGAGGATGACTACGACGAGGATGA
TGACATGGAGGATGATGGGGTTGACGCGGCGCTTGCTGGAACCTATGGTG
ACTATTACGACGAGGGGAGTGATTATGGTAGTGATTAATTAAAGTTACGA
TGATAGCAGGGTTGTATTTCACCGCAAGGCATGTACATAAGAAGTCCGGC
GCCAAGTCGACGGGAATTTGATACCC
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Coding sequence (CDS) from alignment at ACJE01000010.1:2250667..2252992-

>ASPNIDRAFT_52343-T1 ID=ASPNIDRAFT_52343-T1|Name=ASPNIDRAFT_52343-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2238bp|location=Sequence derived from alignment at ACJE01000010.1:2250667..2252992- (Aspergillus niger ATCC 1015)
ATGCGTGCTCCCATTCCCCCACGGAGCGGCCCAAGGCCACCTATGGGAAG
ACTGGCCAGTCTGAAATCGCCCAATCCAACTCCCATCAGGCGTCCCCAGC
CAATTTCTCGGCCTCAACCCGCCAGGCCAACTACCCACCCCAAAACCTCA
ACTTGCCCTAACCCGGGCTGTCCTGCTCCTCACATCGTTGAGGATGACGG
TCAGAAGGTTTGTTCCGGGTGTGGTACTGTCATCAGTGAAGCAAACATCG
TCTCCGAAGTGACTTTCGGGGAATCGTCGTCGGGTGCGGCAGTCGTTCAG
GGTACCTTCGTCGGCGAAGATCAGTCCCATGTCCGCAGTTATGGCCCTGG
CTTTCAGCGTGGAGGCGCTGAAAGTCGCGAGATTACGGAACAGAACGGCA
ATCGGTACATCACCCAGCTGTCTCGTGCCTTGACTATCCCAGAGAGTGCC
ATGAAGGCTGCTGGTCAAGTGTTCAAGCTAGCAGTCGGATTGAACTTCAT
TCAAGGTCGAAGGACCAAGACTGTAGCTGCTGTATGCTTATATATTGCCT
GCCGTCGGCAGGATGGCAACACCATCATGCTCATCGATTTTGCCGATGTT
CTCATGATCAACGTGTTCAAGCTCGGTCGGACCTACAAAGCACTACTCGA
TGAGTTGCGTCTGGGTGGTAACGTGTTTCTGATGAACCCGATTGATCCGG
AGAGTTTGATCTACAGGTTTGCCAAACAGCTTGAATTTGGGTCGGCTACT
ATGCAGGTGGCGAGTGAGGCGGTCCGTATCGTACAGCGAATGAACCGCGA
TTGGATGACGACGGGTCGTCGTCCCGCTGGTATTTGTGGTGCCGCCTTGA
TCCTTGCAGCCCGAATGAACAACTTTCGCCGCACCGTTCGAGAGGTTGTC
TACGTCGTCAAAGTCACCGAGATCACTATCAGCCAACGTTTGAACGAGTT
CAGCTCCACCGAAAGTGGTGAACTTACAGTCGACCAGTTCCGTTCCGTGC
AGCTGGAGAATGCGCATGACCCACCTTCTTTTGCCAGGGCTAGAGAAGGA
AGGAAGCCTTCACGCTCATTCAAGAGACGGCCCACGGAAACGGCTGCGGA
GATTGAGGGTGATATACAAGAAGCACAGCAACATAGGCGTGTCGACTCAG
ACGGCTTCGCTATTCCTAGTCTTCCTATTGACCCGGCATTACTAGCGGCC
AGCGGCGGTCAACGTCGCCATTCGACTGCCTCTGCTGCAAGCGAAGCCAT
TTCGGACGCTGGCGAGGAGCACGCCAAGTCCGGTCGCCAGAAGGGTCCGA
AGAGACCTCCGCTTCCAGCCCCTTCGCCAGATCAGATTGCCTCGGAAGAG
GCTTTGGAGAATGAAATGACCGCGCTATTATCCAAAGGATCGAACATGTT
CGAGTCTAGTGCCGGTCCTCCAAAGAAGGTCGTGTCTGATAATACGGAGA
TTGACGCTGCTGAGTTTGAGTCGGATCCGGAGGTGTCTAACTGCTTGCTC
TCTCCTGCAGAAGTTGAGATCAAAGAACGGATTTGGGTCCATGAGAATAA
AGATTATCTCCGGGCCCAGCAGGCCAAAGCGCTAAAGCGAGCTCTGGCGG
AGGCTGATTCCCACCCTGGCGCGGACGGTCGCGTGCACAAGCCGCGAAAG
CGCCGCCGCGGTAGACTTGGCGACGTAACTTATCTTGAAGGCGAGGGTGA
AGATGGGGATGGCCGCAGCACTCGGGCTTCGACCCCTGCCGAAGCTACCC
GCCGGATGTTGGAAAGAAGAGGGTTCAGCAAAAAGATCAATTATCGTCTT
TTGGAGTCACTCTTCGGCGATGAGGGGGCTGACGAAGCCTCCAAACCTAA
GGAAGAGAGTTTGAGCCGAAGCCAGAGTCGCAGCCAGAGTGTCGTGTCAC
GACGCAGCGCCAGTATCGAACCAGAGGCGGCCTCGAGGCGTACCGGGCTT
CTAACCCCCTCAGCTAGCCAACCTGCTGGAGCTTCTTTGTCTGCCGCGGC
TCCGGCGCGTGGCTCAGCGGTACCCGCTGCTCAAGCCCCGACGGATCAAG
GTGGAAAAGCAAGTGAGAATGAGCAAGTCCTCGGTCCTGCGGATGGAGCA
AAGAACGAGTATTCAGATGACGAGCAAGAGGATGACTACGACGAGGATGA
TGACATGGAGGATGATGGGGTTGACGCGGCGCTTGCTGGAACCTATGGTG
ACTATTACGACGAGGGGAGTGATTATGGTAGTGATTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0017025TBP-class protein binding
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
GO:0070897transcription preinitiation complex assembly
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52343ASPNIDRAFT_52343Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52343-T1.cdsASPNIDRAFT_52343-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52343-T1.utr3p1ASPNIDRAFT_52343-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52343-T1.exon1ASPNIDRAFT_52343-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52343-T1ASPNIDRAFT_52343-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092613QA
DBxrefInterPro:IPR036915
DBxrefInterPro:IPR011665
DBxrefInterPro:IPR013150
DBxrefInterPro:IPR013763
DBxrefInterPro:IPR000812
DBxrefPFAM:PF00382
DBxrefPFAM:PF07741
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2250667..2252992 -
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