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ASPNIDRAFT_52374-T1, ASPNIDRAFT_52374-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52374-T1
Unique NameASPNIDRAFT_52374-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:2511946..2514198+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52374-T1 ID=ASPNIDRAFT_52374-T1|Name=ASPNIDRAFT_52374-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2253bp|location=Sequence derived from alignment at ACJE01000010.1:2511946..2514198+ (Aspergillus niger ATCC 1015)
ATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGT
GAGTACTCCTTCATCTTGCCCTTTCTGGTATTGCAAAGACCTTGTCCTTT
GAGGCGTGTTGAACAACACCGTGCGCAGGCTTGTGACAGCAATCTAACAC
TGGTGGCTAGGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCA
TGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGTT
GCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCA
GAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGTG
AGATTTATTAGCATTCCCAATATTGCATCGCTTTGCCGCGCTACAACTAT
GTGCAGGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGC
AACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGA
TCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGC
CAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTC
CCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTA
TGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAAC
AGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCA
ATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGA
GGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATC
AGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGC
ATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGA
CGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGG
AGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCT
GAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTA
TGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCT
CATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACT
ACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATT
GCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGC
TGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGA
AATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATC
TGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGAC
GGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACG
ATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGA
TCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCAT
TAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACC
GCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGC
GAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTC
AGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATC
GACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGT
CTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGC
CAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGC
ACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGC
AGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTA
AATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAG
GAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGA
TCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCA
GGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCC
TGA
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Coding sequence (CDS) from alignment at ACJE01000010.1:2511946..2514198+

>ASPNIDRAFT_52374-T1 ID=ASPNIDRAFT_52374-T1|Name=ASPNIDRAFT_52374-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=6246bp|location=Sequence derived from alignment at ACJE01000010.1:2511946..2514198+ (Aspergillus niger ATCC 1015)
ATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGT
CCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCATGCGAAGGCGTT
CCGATGACTGGATAAATGCTACACATATTCTGAAAGTTGCCGGGTTTGAC
AAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCAGAAAGGGGTCCA
TGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGGACATGGATTCCGC
TTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAACATAATCGACAAGCTA
AGGCCGATATTCGACTACGTTGCTGGAGATCGCAGTCCACCACCTGCCCC
GAAACATACCACTGCAGCCTCGTCGAAGCCAAGAGCCCCAAAGAATACAA
ACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTGTAAAACCGCACCGA
AGTATGGCACCGCCCGCCTATCATCCCTATGAGCCCTATGAAATGAGCCA
AGGATTCGACGAGGATGAATCTTTAGAACAGGCAACGCTTGAGTCATCGT
CTATGATCGCGGATGATGAGATTATGGCAATGTCTCAAAATGGTACATAC
TCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCCAGCAATCTCAATTAG
TGAACAGGAACACATACTCTATGGTGATCAGTTGTTGGATTATTTCATGA
CAGTAGGGGATGCACCGGAAGCGACACGCATTCCTCCCCCACAACCGCCT
GCCAACTTCCAGGTCGATCGCGCGATTGACGAATCTGGAAATACTGCTCT
CCATTGGGCATGCGCCATGGGTGACTTGGAGATTGTGAGAGATCTACTAC
GGAGAGGGGCAAATATCAAAGCACTATCTGAACAGGAGGAGACACCCCTC
GTGCGTGCCGTGCTGTTCACGAACAATTATGAGAAGAGGACGTTTCCACC
GCTATTAGATCTTCTCTTGGACACAGTCTCATTCCGAGACTGGTTCGGCG
CCACTCTATTCCACCACATAGCAGAGACTACTCGGAGCAAAGGCAAATGG
AAGAGCTCGCGATATTACTGCGAAGTATTGCTAGACAAGCTACGCGTTAC
GTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTTGTCAAGATCAGAATG
GGGACACTGCTGCTCTGATTGCTGCTCGAAATGGCGCGTTTCGTTTGGTT
GACCTACTACTCGCTCGGTGTCCGCGATCTGGTGAGCTTATAAATAATAA
AGGCGAGGCAGCCTCAACTATCGTCCGACGGGTACCACCTAATGAGCGCG
ACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGTAATGATCAATTAGAT
CCCGACGTCACAGCACCTGTCACATCAGATCACCAGCCTCCCAGCCTTCC
GCAGGATTCCTCCCCTGCTACCTCGGCATTAATGTCTAAGATTGCCGTCA
TAATGGCCGAGGCGAACAGGAAACTCACCGCAGGCTACGGGAGCTCCAAG
GCAAACCAGCAAGATTCAGACGATGTTGCGAATCCGGAGGCACTTTATGC
GCAACTTGAATCGGATCGGCAAAAGATTCAGAAACAGGTTAGTATGCTGG
TGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCGCAGCTGGACCGCTAC
GAACAATTAAGACATAGCTACGAATCCGTCTTGGAGCAAATTCACCAGGC
TCGACTCAGAGAGAGGATCGCATCAACGCCAGTGCCCGAGAAGGAAGATA
CGGGATCTGACCAGGACCAACAACTTCGCACATATCATATGGCCCGTCAA
TTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTGAAGGATCTTGTCCA
ACAGACGGCCGATGCGGGTGTAAGCACTAAATTCGATGTCCATCGCAAGT
TGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGATCTAGATCCAATGGCC
GCAGAGCTGGCTGAAACACTAGAATTCGATCGAATGAATGGGAAGGCTGC
AGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTCGGCCACATTCCCCA
TTCCTGGTCCGACGGTATCCGTGGATGCCTGAATGGCGGCCGTGGACTTC
TCCAAAGTTTACTCTGCTACTTATAGCAGTGTCCCGGTTTATGAGTTCAA
AATCGACGGTGACAGTGTCATGCGAAGGCGTTCCGATGACTGGATAAATG
CTACACATATTCTGAAAGTTGCCGGGTTTGACAAGCCTGCGAGGACTCGC
ATCCTGGAACGCGAGGTGCAGAAAGGGGTCCATGAAAAGGTGCAAGGTGG
CTATGGGAAATATCAAGGGACATGGATTCCGCTTCCTGAGGGCCGCATGC
TCGCTGAGCGCAACAACATAATCGACAAGCTAAGGCCGATATTCGACTAC
GTTGCTGGAGATCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGC
CTCGTCGAAGCCAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATG
AAGAGGTTGTCCCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCC
TATCATCCCTATGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGA
ATCTTTAGAACAGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATG
AGATTATGGCAATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGT
GGGATAAACGAGGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACT
CTATGGTGATCAGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGG
AAGCGACACGCATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGAT
CGCGCGATTGACGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCAT
GGGTGACTTGGAGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCA
AAGCACTATCTGAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTC
ACGAACAATTATGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTT
GGACACAGTCTCATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACA
TAGCAGAGACTACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTAC
TGCGAAGTATTGCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGT
TGATTTATTGCTGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGA
TTGCTGCTCGAAATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGG
TGTCCGCGATCTGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAAC
TATCGTCCGACGGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTT
CGTCTATCACGATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCT
GTCACATCAGATCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGC
TACCTCGGCATTAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACA
GGAAACTCACCGCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCA
GACGATGTTGCGAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCG
GCAAAAGATTCAGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAG
AAGAGTCAATCGACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGC
TACGAATCCGTCTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGAT
CGCATCAACGCCAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACC
AACAACTTCGCACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAG
GCTCGGCGCGCAGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGG
TGTAAGCACTAAATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCG
GCCTCAAAGAGGAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACA
CTAGAATTCGATCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGA
GCCAGAGGCCAGGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTAT
CCGTGGATGCCTGAATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCT
ACTTATAGCAGTGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGT
CATGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAG
TTGCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTG
CAGAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGG
GACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAACA
TAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGATCGCAGT
CCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGCCAAGAGC
CCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTG
TAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTATGAGCCC
TATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAACAGGCAAC
GCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCAATGTCTC
AAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCCA
GCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATCAGTTGTT
GGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGCATTCCTC
CCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGACGAATCT
GGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGGAGATTGT
GAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCTGAACAGG
AGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTATGAGAAG
AGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCTCATTCCG
AGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACTACTCGGA
GCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATTGCTAGAC
AAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTTG
TCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGAAATGGCG
CGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATCTGGTGAG
CTTATAAATAATAAAGGCGAGGCAGCCTCAACTATCGTCCGACGGGTACC
ACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGTA
ATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGATCACCAG
CCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCATTAATGTC
TAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACCGCAGGCT
ACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGCGAATCCG
GAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTCAGAAACA
GGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCGC
AGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGTCTTGGAG
CAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGCCAGTGCC
CGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGCACATATC
ATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTG
AAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTAAATTCGA
TGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGATC
TAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGATCGAATG
AATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTC
GGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCCTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52374ASPNIDRAFT_52374Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52374-T1.exon1ASPNIDRAFT_52374-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52374-T1.exon2ASPNIDRAFT_52374-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52374-T1.exon3ASPNIDRAFT_52374-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52374-T1.cdsASPNIDRAFT_52374-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52374-T1ASPNIDRAFT_52374-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR003163
DBxrefInterPro:IPR036887
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR018004
DBxrefInterPro:IPR002110
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:2511946..2514198 +
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