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ASPNIDRAFT_52442-T1, ASPNIDRAFT_52442-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52442-T1
Unique NameASPNIDRAFT_52442-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3211830..3213461+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52442-T1 ID=ASPNIDRAFT_52442-T1|Name=ASPNIDRAFT_52442-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1632bp|location=Sequence derived from alignment at ACJE01000010.1:3211830..3213461+ (Aspergillus niger ATCC 1015)
GCTCCATCTCACCACCACGCCCTTCATTGCCTTTGCACCTTTCATTCAAC
CTCACCTTATTTATCTCCACGAATACATTTCTCAACTGATTTGTTACTCC
TTCATCTTACCGTCTTGCCACATATCCTCCCGTCACCATGCCTAGCGCCA
CGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGCCGATGACGAAGAG
CCAGAGAAGAAGATCACCCCTCTTACAGACGAGTAGGTGATTCCCGGTGT
TTTATCAGCATCGATAGTGGTTGGTTCCCGCATCTGGATGGCTAACTGGC
CGCAGGGATATCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCAC
GGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAA
ACGAGAAGATTGGCGTCAAGGTATTGAGGTCTGCGATATACGTCATACCG
GACACGTCTGACTAGCTGCTTAGGAATCCGATACCGGTCTTGCGCCTCCA
CACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACC
GCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGG
ATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTC
AACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGT
CGGGTATGACCCTGCAGCTTTGCTATGCATCTTCCCATCTAACAGATGAC
AGTGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCTCCCAAGAT
CGACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGATGTGACGT
ACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTC
GTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGA
CCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACAC
TTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTC
ATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGT
CCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCT
TCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGT
GGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGA
TGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGAC
CGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAG
ATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGAT
TCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTT
CGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACA
GAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAA
GGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCA
ACTCGACGGCGACGTACATGCAGTATAATTAG
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Coding sequence (CDS) from alignment at ACJE01000010.1:3211830..3213461+

>ASPNIDRAFT_52442-T1 ID=ASPNIDRAFT_52442-T1|Name=ASPNIDRAFT_52442-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5280bp|location=Sequence derived from alignment at ACJE01000010.1:3211830..3213461+ (Aspergillus niger ATCC 1015)
ATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGC
CGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGGATA
TCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCACGGCATTAAAG
AAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAAACGAGAAGAT
TGGCGTCAAGGAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATG
TTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCT
CGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATA
TGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAAC
GCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGGTGTCGACCGC
AATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGT
GACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCG
GAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCA
TTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGG
TGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAG
CCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAG
TTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTT
CGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCG
ATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAA
GTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGC
ACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGG
ACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAGATCGAGTTCTCG
CTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAG
CATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCC
CGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATG
TTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGC
CGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGA
CGTACATGCAGTATAATTAGATGCCTAGCGCCACGGGAGAGAACTGGGAG
AAGTACAAGAAGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCAC
CCCTCTTACAGACGAGGATATCCAAGTATTGAAGACCTACGGTGCCGCTC
CCTACGCCACGGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAA
GCGAGTGTAAACGAGAAGATTGGCGTCAAGGAATCCGATACCGGTCTTGC
GCCTCCACACCTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGG
AGCAACCGCTGCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAG
GACTCGGATAAGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTT
TGTCGTCAACCTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCA
TGAGAGTCGGTGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCT
CCCAAGATCGACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGA
TGTGACGTACGGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGC
GAGAAGTCGTCGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTC
GGTATCGACCCGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGG
TAAGACACTTTGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCA
TCCGTGTCATTGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCT
CGGATGGTCCGTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCAT
TATCTTCTTCGACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACG
GAGCGGGTGGTGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACG
CAGCTGGATGGTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTAC
CAACCGACCGTCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCG
ACCGTAAGATCGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATT
CTCCGGATTCACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGA
GCTGATTTCGCGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTG
TTGCGACAGAGGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCC
ACGGAGAAGGACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCT
GAAGTTCAACTCGACGGCGACGTACATGCAGTATAATTAGATGCCTAGCG
CCACGGGAGAGAACTGGGAGAAGTACAAGAAGAACTTCGCCGATGACGAA
GAGCCAGAGAAGAAGATCACCCCTCTTACAGACGAGGATATCCAAGTATT
GAAGACCTACGGTGCCGCTCCCTACGCCACGGCATTAAAGAAGCTCGAAA
AACAGATCAAGGACAGACAAGCGAGTGTAAACGAGAAGATTGGCGTCAAG
GAATCCGATACCGGTCTTGCGCCTCCACACCTTTGGGATGTTGCTGCGGA
CCGACAGCGCATGGCAGAGGAGCAACCGCTGCAGGTAGCTCGTTGTACAA
AGATCATTTCGGATGAGAAGGACTCGGATAAGAGCAAATATGTTATCAAC
GTTAAGCAGATCGCCAAGTTTGTCGTCAACCTTGGGGAACGCGTGAGTCC
TACGGATATCGAAGAGGGCATGAGAGTCGGTGTCGACCGCAATAAATACC
AGATTATGCTACCTCTCCCTCCCAAGATCGACCCCAGCGTGACGATGATG
ACTGTCGAGGACAAGCCCGATGTGACGTACGGCGATGTCGGAGGATGCAA
GGAACAAATTGAGAAGTTGCGAGAAGTCGTCGAGATGCCATTGCTATCGC
CAGAGCGCTTCGTTAACCTCGGTATCGACCCGCCGAAGGGTGCTCTGCTC
TACGGACCTCCCGGAACTGGTAAGACACTTTGCGCTCGAGCCGTGGCCAA
CCGAACCGACGCTACGTTCATCCGTGTCATTGGTAGTGAGTTGGTGCAGA
AGTATGTTGGTGAGGGTGCTCGGATGGTCCGTGAGCTTTTCGAGATGGCC
CGAACAAAGAAGGCGTGCATTATCTTCTTCGACGAAATCGATGCGGTCGG
CGGTGCTCGTTTCGACGACGGAGCGGGTGGTGACAACGAAGTTCAACGTA
CCATGTTGGAGTTGATTACGCAGCTGGATGGTTTCGACGCACGTGGTAAC
ATCAAGGTCATGTTCGCTACCAACCGACCGTCGACTTTGGACCCTGCCCT
GATGCGTCCTGGTCGTATCGACCGTAAGATCGAGTTCTCGCTCCCGGATG
TCGAGGGCCGTGCCAACATTCTCCGGATTCACGCCAAGAGCATGTCGGTG
GAGCGGGACATTCGGTGGGAGCTGATTTCGCGTCTGTGCCCGAACGCTAC
AGGAGCTGAGCTCCGGAGTGTTGCGACAGAGGCGGGCATGTTTGCTATTC
GGGCGCGGCGGAAGGTGGCCACGGAGAAGGACTTCCTGGCCGCGGTGGAC
AAGGTGATCAAGGGTAACCTGAAGTTCAACTCGACGGCGACGTACATGCA
GTATAATTAGATGCCTAGCGCCACGGGAGAGAACTGGGAGAAGTACAAGA
AGAACTTCGCCGATGACGAAGAGCCAGAGAAGAAGATCACCCCTCTTACA
GACGAGGATATCCAAGTATTGAAGACCTACGGTGCCGCTCCCTACGCCAC
GGCATTAAAGAAGCTCGAAAAACAGATCAAGGACAGACAAGCGAGTGTAA
ACGAGAAGATTGGCGTCAAGGAATCCGATACCGGTCTTGCGCCTCCACAC
CTTTGGGATGTTGCTGCGGACCGACAGCGCATGGCAGAGGAGCAACCGCT
GCAGGTAGCTCGTTGTACAAAGATCATTTCGGATGAGAAGGACTCGGATA
AGAGCAAATATGTTATCAACGTTAAGCAGATCGCCAAGTTTGTCGTCAAC
CTTGGGGAACGCGTGAGTCCTACGGATATCGAAGAGGGCATGAGAGTCGG
TGTCGACCGCAATAAATACCAGATTATGCTACCTCTCCCTCCCAAGATCG
ACCCCAGCGTGACGATGATGACTGTCGAGGACAAGCCCGATGTGACGTAC
GGCGATGTCGGAGGATGCAAGGAACAAATTGAGAAGTTGCGAGAAGTCGT
CGAGATGCCATTGCTATCGCCAGAGCGCTTCGTTAACCTCGGTATCGACC
CGCCGAAGGGTGCTCTGCTCTACGGACCTCCCGGAACTGGTAAGACACTT
TGCGCTCGAGCCGTGGCCAACCGAACCGACGCTACGTTCATCCGTGTCAT
TGGTAGTGAGTTGGTGCAGAAGTATGTTGGTGAGGGTGCTCGGATGGTCC
GTGAGCTTTTCGAGATGGCCCGAACAAAGAAGGCGTGCATTATCTTCTTC
GACGAAATCGATGCGGTCGGCGGTGCTCGTTTCGACGACGGAGCGGGTGG
TGACAACGAAGTTCAACGTACCATGTTGGAGTTGATTACGCAGCTGGATG
GTTTCGACGCACGTGGTAACATCAAGGTCATGTTCGCTACCAACCGACCG
TCGACTTTGGACCCTGCCCTGATGCGTCCTGGTCGTATCGACCGTAAGAT
CGAGTTCTCGCTCCCGGATGTCGAGGGCCGTGCCAACATTCTCCGGATTC
ACGCCAAGAGCATGTCGGTGGAGCGGGACATTCGGTGGGAGCTGATTTCG
CGTCTGTGCCCGAACGCTACAGGAGCTGAGCTCCGGAGTGTTGCGACAGA
GGCGGGCATGTTTGCTATTCGGGCGCGGCGGAAGGTGGCCACGGAGAAGG
ACTTCCTGGCCGCGGTGGACAAGGTGATCAAGGGTAACCTGAAGTTCAAC
TCGACGGCGACGTACATGCAGTATAATTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005737cytoplasm
Vocabulary: Biological Process
TermDefinition
GO:0030163protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0016787hydrolase activity
GO:0005524ATP binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPT1ASPNIDRAFT_52442Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52442-T1ASPNIDRAFT_52442-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52442-T1.utr5p1ASPNIDRAFT_52442-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52442-T1.exon1ASPNIDRAFT_52442-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52442-T1.exon2ASPNIDRAFT_52442-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52442-T1.exon3ASPNIDRAFT_52442-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52442-T1.exon4ASPNIDRAFT_52442-T1.exon4Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52442-T1.cdsASPNIDRAFT_52442-T1.cdsAspergillus niger ATCC 1015CDS


Properties
Property NameValue
DBxrefInterPro:IPR027417
DBxrefInterPro:IPR003960
DBxrefInterPro:IPR005937
DBxrefInterPro:IPR003959
DBxrefInterPro:IPR003593
DBxrefPFAM:PF00004
Product26S proteasome regulatory subunit 7
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3211830..3213461 +
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