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ASPNIDRAFT_52452-T1, ASPNIDRAFT_52452-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52452-T1
Unique NameASPNIDRAFT_52452-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000010.1:3315064..3316948-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52452-T1 ID=ASPNIDRAFT_52452-T1|Name=ASPNIDRAFT_52452-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1885bp|location=Sequence derived from alignment at ACJE01000010.1:3315064..3316948- (Aspergillus niger ATCC 1015)
ATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGAATGCTC
CGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTCCAACGATGATGGTA
TCGGTGACATTCCAGGTATCATCTCGAAGCTGGATTATATCAAGAATATA
GGCGTGGATATCGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCAGGTGGA
TATGGGCTATGATATTGCCGATTACTATAGCATTGCGGATGAGTACGGCA
CGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGGGGTATG
AAGCTCCTTATGGACCTTGTGGTTAACCACACTAGTGATCAGAATGAGTG
GTTCAAACAGTCGCGCAGCTCGAAGGACAATGAGTATCGCAACTGGTATG
TTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCGCCTAAC
AACTGGGTGTCGCATTTTCAGGGTGAGTTTCTTGCTTTGATTTGAAGTCA
TTCAATTTTTTGGAATAAGCTTTCTGACCCTGGCTGTAGGTAGTGCCTGG
GAATGGGACGAGCACACGGGTGAATACTACCTTCACCTCTACGCGACAGA
ACAGCCCGACCTCAACTGGGAGCATCCGCCCGTCCGCAAGGCGGTTCACG
ATATCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCGCATGGAT
GTCATCAATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTCCTGTGAA
GGACCCTCGAACCCCGTGGCAGTGGGGAGACAAGTACTACGCCAATGGAC
CGAGATTACATGAATATCTCCAAGACCTGGGGAAGATTCTGAAGGAGTAC
GATGCCTTCAGTGTTGGAGAGATGCCCTTCGTCAGAGACACCGAGGAGGT
GCTCCGCGCTGTGCGCTACGATCGGAACGAGATCAACATGATTTTCAACT
TCGAGCATGTGGACATTGACCACGGAACATACGACAAATTCGAGCCTGGA
AGCTGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTT
CATGTACAACAATGATGGGTGGAATGCTCTTTACTGGGAGAACCACGATC
AGCCGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTTCCGCACA
GAAGCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTGGTACGCC
GTTCGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCCGTTGAAT
GGGACATGAACGAGTACAAGGACATTGACTGTCTCAACCACTGGCATCGG
TAGGCATATGTCCCTACCCGTCTATATAGGTCGATCACTAACTGCTCCTT
TAGCCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAGAGCGCCC
GTCAGGAATACCAAAAGAAATCCCGAGACAACGGCCGCACACCGGTGCAG
TGGTCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAAAGCCTTG
GATGTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCGCAGGTCA
ATGACCCGAACTCGATCTACCACTACTGGGCTGCTGTTCTTGGATTGCGC
AAGAAATACCTCGACATCTTTGTCTATGGGGACTACGACTTGGTTGATAA
GGATAGCCAGGAGGTCTTCGCGTATGCTCGTCAATTTGAGAACCAGAAGG
CGCTGGTTCTCACTAACTGGACTGAGAAAACATTGGAGTGGGATGCTACT
GCCAACGGCGTGAAGGGCATCAAGGATGTGCTATTGAACTCGTATGAAAG
CGCTGAAGCAGCGAAGGAGCGATTCACAGGACAGAAGTGGTCTCTACGCC
CGTATGAAGCAGTTGTTCTTTTGGTGGAGGCCTAA
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Coding sequence (CDS) from alignment at ACJE01000010.1:3315064..3316948-

>ASPNIDRAFT_52452-T1 ID=ASPNIDRAFT_52452-T1|Name=ASPNIDRAFT_52452-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5292bp|location=Sequence derived from alignment at ACJE01000010.1:3315064..3316948- (Aspergillus niger ATCC 1015)
CCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCAGAAGAGCGCCCGTC
AGGAATACCAAAAGAAATCCCGAGACAACGGCCGCACACCGGTGCAGTGG
TCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAACGCAAAGCCTTGGAT
GTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGAAGCGCAGGTCAATG
ACCCGAACTCGATCTACCACTACTGGGCTGCTGTTCTTGGATTGCGCAAG
AAATACCTCGACATCTTTGTCTATGGGGACTACGACTTGGTTGATAAGGA
TAGCCAGGAGGTCTTCGCGTATGCTCGTCAATTTGAGAACCAGAAGGCGC
TGGTTCTCACTAACTGGACTGAGAAAACATTGGAGTGGGATGCTACTGCC
AACGGCGTGAAGGGCATCAAGGATGTGCTATTGAACTCGTATGAAAGCGC
TGAAGCAGCGAAGGAGCGATTCACAGGACAGAAGTGGTCTCTACGCCCGT
ATGAAGCAGTTGTTCTTTTGGTGGAGGCCTAAGTAGTGCCTGGGAATGGG
ACGAGCACACGGGTGAATACTACCTTCACCTCTACGCGACAGAACAGCCC
GACCTCAACTGGGAGCATCCGCCCGTCCGCAAGGCGGTTCACGATATCAT
GCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCGCATGGATGTCATCA
ATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTCCTGTGAAGGACCCT
CGAACCCCGTGGCAGTGGGGAGACAAGTACTACGCCAATGGACCGAGATT
ACATGAATATCTCCAAGACCTGGGGAAGATTCTGAAGGAGTACGATGCCT
TCAGTGTTGGAGAGATGCCCTTCGTCAGAGACACCGAGGAGGTGCTCCGC
GCTGTGCGCTACGATCGGAACGAGATCAACATGATTTTCAACTTCGAGCA
TGTGGACATTGACCACGGAACATACGACAAATTCGAGCCTGGAAGCTGGA
AGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGCAGAAGTTCATGTAC
AACAATGATGGGTGGAATGCTCTTTACTGGGAGAACCACGATCAGCCGCG
GTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTTCCGCACAGAAGCAG
GTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTGGTACGCCGTTCGTG
TACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCCGTTGAATGGGACAT
GAACGAGTACAAGGACATTGACTGTCTCAACCACTGGCATCGATGGCCAA
ATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGAATGCTCCGTCTATC
AGATCTGGCCTGCTTCGTACAAGGATTCCAACGATGATGGTATCGGTGAC
ATTCCAGGTATCATCTCGAAGCTGGATTATATCAAGAATATAGGCGTGGA
TATCGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCAGGTGGATATGGGCT
ATGATATTGCCGATTACTATAGCATTGCGGATGAGTACGGCACGGTCGCG
GATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGGGGTATGAAGCTCCT
TATGGACCTTGTGGTTAACCACACTAGTGATCAGAATGAGTGGTTCAAAC
AGTCGCGCAGCTCGAAGGACAATGAGTATCGCAACTGGTATGTTTGGAAG
CCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCGCCTAACAACTGGGT
GTCGCATTTTCAGGCCTTCTCAAGCACAGGCCCGATGATATCGAAGCCCA
GAAGAGCGCCCGTCAGGAATACCAAAAGAAATCCCGAGACAACGGCCGCA
CACCGGTGCAGTGGTCAAGTGCACCAAACGGTGGGTTCACCGGTCCCAAC
GCAAAGCCTTGGATGTCCGTCAACCCGGACTATGTGCGCTTCAATGCTGA
AGCGCAGGTCAATGACCCGAACTCGATCTACCACTACTGGGCTGCTGTTC
TTGGATTGCGCAAGAAATACCTCGACATCTTTGTCTATGGGGACTACGAC
TTGGTTGATAAGGATAGCCAGGAGGTCTTCGCGTATGCTCGTCAATTTGA
GAACCAGAAGGCGCTGGTTCTCACTAACTGGACTGAGAAAACATTGGAGT
GGGATGCTACTGCCAACGGCGTGAAGGGCATCAAGGATGTGCTATTGAAC
TCGTATGAAAGCGCTGAAGCAGCGAAGGAGCGATTCACAGGACAGAAGTG
GTCTCTACGCCCGTATGAAGCAGTTGTTCTTTTGGTGGAGGCCTAAGTAG
TGCCTGGGAATGGGACGAGCACACGGGTGAATACTACCTTCACCTCTACG
CGACAGAACAGCCCGACCTCAACTGGGAGCATCCGCCCGTCCGCAAGGCG
GTTCACGATATCATGCGTTTCTGGCTAGACAAAGGCGCGGATGGATTCCG
CATGGATGTCATCAATTTCATCAGCAAAGACCAACGGTTCCCGGATGCTC
CTGTGAAGGACCCTCGAACCCCGTGGCAGTGGGGAGACAAGTACTACGCC
AATGGACCGAGATTACATGAATATCTCCAAGACCTGGGGAAGATTCTGAA
GGAGTACGATGCCTTCAGTGTTGGAGAGATGCCCTTCGTCAGAGACACCG
AGGAGGTGCTCCGCGCTGTGCGCTACGATCGGAACGAGATCAACATGATT
TTCAACTTCGAGCATGTGGACATTGACCACGGAACATACGACAAATTCGA
GCCTGGAAGCTGGAAGCTCACTGACTTGAAGGCTTTCTTCGAGACGTGGC
AGAAGTTCATGTACAACAATGATGGGTGGAATGCTCTTTACTGGGAGAAC
CACGATCAGCCGCGGTCGATTGATCGCTATGCACAAGCAAAGGAGGAGTT
CCGCACAGAAGCAGGTAAAATGCTGGCGACGGTTCTTGCGCTGCAGTCTG
GTACGCCGTTCGTGTACCAGGGTCAGGAAATTGGAATGAGAAATGTTCCC
GTTGAATGGGACATGAACGAGTACAAGGACATTGACTGTCTCAACCACTG
GCATCGATGGCCAAATCCGCCTCCCAGATTCACCGCGCCTGGTGGAAGGA
ATGCTCCGTCTATCAGATCTGGCCTGCTTCGTACAAGGATTCCAACGATG
ATGGTATCGGTGACATTCCAGGTATCATCTCGAAGCTGGATTATATCAAG
AATATAGGCGTGGATATCGTTTGGTTGTGTCCTTCCTATAAGTCGCCTCA
GGTGGATATGGGCTATGATATTGCCGATTACTATAGCATTGCGGATGAGT
ACGGCACGGTCGCGGATGTCGAAAAGCTCATCCAGGGGTGCCACGAGCGG
GGTATGAAGCTCCTTATGGACCTTGTGGTTAACCACACTAGTGATCAGAA
TGAGTGGTTCAAACAGTCGCGCAGCTCGAAGGACAATGAGTATCGCAACT
GGTATGTTTGGAAGCCGGCCAGGTATGATGAGCAGGGTAACCGGCACCCG
CCTAACAACTGGGTGTCGCATTTTCAGGCCTTCTCAAGCACAGGCCCGAT
GATATCGAAGCCCAGAAGAGCGCCCGTCAGGAATACCAAAAGAAATCCCG
AGACAACGGCCGCACACCGGTGCAGTGGTCAAGTGCACCAAACGGTGGGT
TCACCGGTCCCAACGCAAAGCCTTGGATGTCCGTCAACCCGGACTATGTG
CGCTTCAATGCTGAAGCGCAGGTCAATGACCCGAACTCGATCTACCACTA
CTGGGCTGCTGTTCTTGGATTGCGCAAGAAATACCTCGACATCTTTGTCT
ATGGGGACTACGACTTGGTTGATAAGGATAGCCAGGAGGTCTTCGCGTAT
GCTCGTCAATTTGAGAACCAGAAGGCGCTGGTTCTCACTAACTGGACTGA
GAAAACATTGGAGTGGGATGCTACTGCCAACGGCGTGAAGGGCATCAAGG
ATGTGCTATTGAACTCGTATGAAAGCGCTGAAGCAGCGAAGGAGCGATTC
ACAGGACAGAAGTGGTCTCTACGCCCGTATGAAGCAGTTGTTCTTTTGGT
GGAGGCCTAAGTAGTGCCTGGGAATGGGACGAGCACACGGGTGAATACTA
CCTTCACCTCTACGCGACAGAACAGCCCGACCTCAACTGGGAGCATCCGC
CCGTCCGCAAGGCGGTTCACGATATCATGCGTTTCTGGCTAGACAAAGGC
GCGGATGGATTCCGCATGGATGTCATCAATTTCATCAGCAAAGACCAACG
GTTCCCGGATGCTCCTGTGAAGGACCCTCGAACCCCGTGGCAGTGGGGAG
ACAAGTACTACGCCAATGGACCGAGATTACATGAATATCTCCAAGACCTG
GGGAAGATTCTGAAGGAGTACGATGCCTTCAGTGTTGGAGAGATGCCCTT
CGTCAGAGACACCGAGGAGGTGCTCCGCGCTGTGCGCTACGATCGGAACG
AGATCAACATGATTTTCAACTTCGAGCATGTGGACATTGACCACGGAACA
TACGACAAATTCGAGCCTGGAAGCTGGAAGCTCACTGACTTGAAGGCTTT
CTTCGAGACGTGGCAGAAGTTCATGTACAACAATGATGGGTGGAATGCTC
TTTACTGGGAGAACCACGATCAGCCGCGGTCGATTGATCGCTATGCACAA
GCAAAGGAGGAGTTCCGCACAGAAGCAGGTAAAATGCTGGCGACGGTTCT
TGCGCTGCAGTCTGGTACGCCGTTCGTGTACCAGGGTCAGGAAATTGGAA
TGAGAAATGTTCCCGTTGAATGGGACATGAACGAGTACAAGGACATTGAC
TGTCTCAACCACTGGCATCGATGGCCAAATCCGCCTCCCAGATTCACCGC
GCCTGGTGGAAGGAATGCTCCGTCTATCAGATCTGGCCTGCTTCGTACAA
GGATTCCAACGATGATGGTATCGGTGACATTCCAGGTATCATCTCGAAGC
TGGATTATATCAAGAATATAGGCGTGGATATCGTTTGGTTGTGTCCTTCC
TATAAGTCGCCTCAGGTGGATATGGGCTATGATATTGCCGATTACTATAG
CATTGCGGATGAGTACGGCACGGTCGCGGATGTCGAAAAGCTCATCCAGG
GGTGCCACGAGCGGGGTATGAAGCTCCTTATGGACCTTGTGGTTAACCAC
ACTAGTGATCAGAATGAGTGGTTCAAACAGTCGCGCAGCTCGAAGGACAA
TGAGTATCGCAACTGGTATGTTTGGAAGCCGGCCAGGTATGATGAGCAGG
GTAACCGGCACCCGCCTAACAACTGGGTGTCGCATTTTCAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0005975carbohydrate metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52452ASPNIDRAFT_52452Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52452-T1ASPNIDRAFT_52452-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52452-T1.cdsASPNIDRAFT_52452-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52452-T1.exon3ASPNIDRAFT_52452-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52452-T1.exon2ASPNIDRAFT_52452-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52452-T1.exon1ASPNIDRAFT_52452-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteCAZy:GH13_2
NoteCAZy:GH13_1
NoteCAZy:GH13_4
NoteCAZy:GH13_20
NoteCAZy:GH13_35
NoteCAZy:GH13_16
NoteCAZy:GH13_30
NoteCAZy:GH13_36
NoteCAZy:GH13
NoteCAZy:GH13_17
NoteCAZy:GH13_23
NoteCAZy:GH13_29
NoteCAZy:GH13_31
NoteCAZy:GH13_40
DBxrefInterPro:IPR017853
DBxrefInterPro:IPR013780
DBxrefInterPro:IPR006047
DBxrefPFAM:PF00128
Productalpha-amylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000010.1supercontigACJE01000010.1:3315064..3316948 -
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