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ASPNIDRAFT_52528-T1, ASPNIDRAFT_52528-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52528-T1
Unique NameASPNIDRAFT_52528-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2873474..2875404-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52528-T1 ID=ASPNIDRAFT_52528-T1|Name=ASPNIDRAFT_52528-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1931bp|location=Sequence derived from alignment at ACJE01000021.1:2873474..2875404- (Aspergillus niger ATCC 1015)
CCACACTTGACTCCGATCTTCCACCCTTCGATATCAACATATCTTCCGGA
ATTCCAATATCTACCGGTGCAGTGGAAACGGAGGAAGAAACCGATCCCAG
TACAGCTACGCGCTTGTGAGACGTGTAGCCAACGCGACAGCTAACATGAC
CTCGTCCAGCAGGCGAGATCACTCATATTTACCCCGGAGCAGACCTCGTG
CCCTTAGACGTCTTCCCGTCTTCTCTTCCACGACGGCTCGTGAGGCTGGC
ACTATCTTATCGTAAGCTTCTTTGTCGCGCAGGACAGTTTTACCAAGCTC
ACTGCACTAGGATTTGCGATCATGACGCCTCGTGTACTTCCATCGCGCAA
TGTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACC
AGGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATT
AATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGT
CGTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATG
AAGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCG
GTCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTC
CAAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACG
TTCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAG
ATTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGC
AGCCGCCGCATTCTAGTAAGCCACGTCTCTCATCACCCACGATTAGAAAC
TGAAAATCGCCTTAGCCGAGTACTAGTAAATTCGACACTACTGCTCTCCC
CTCCGCCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATA
GAAAATCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGT
CCTCAACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGAC
TAAGAGCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCA
TCCTACAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCA
TCTGATGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCG
AAGTCTGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCA
CTTTCTGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTC
TGAGTTAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATG
GCGATATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGG
GACAGTCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTT
TGTCTCAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGA
TACTTTGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGT
GAAGCCCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCC
TTTATCGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTC
GATCAAAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTC
AGAAGTGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGC
AAGGGTGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGAC
GACGGAGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGAT
GGTGGCTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGA
ATTGAGATCCTCCCAGGCTGGTTGCAGTTAG
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Coding sequence (CDS) from alignment at ACJE01000021.1:2873474..2875404-

>ASPNIDRAFT_52528-T1 ID=ASPNIDRAFT_52528-T1|Name=ASPNIDRAFT_52528-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3120bp|location=Sequence derived from alignment at ACJE01000021.1:2873474..2875404- (Aspergillus niger ATCC 1015)
CCGAGTACTAGTAAATTCGACACTACTGCTCTCCCCTCCGCCGCTTCCTT
TCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAATCACTTGCTC
CTTGGCACCATGAACCTAGTCAATCGCTTAAACGTCCTCAACAAACTCCC
TCTCGAGTCGGAACTCCGACAAGTGATGCATGGACTAAGAGCCTACACAG
CAAATATCGACGACTATATTTCTGGACGCAGTCCATCCTACAGTCCCCAG
GCAATGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGATGAGCATAGG
GCCCATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTCTGTCGACTAG
CGACAATTATCTACAGCATCGGAGTGACATTTCCACTTTCTGGCGTCCGA
GCTCCTTTTGGAACTCTGGCCATGACATTACAGTCTGAGTTAGAAAAGAA
TGATCTTCTCAACAACTGGCCGATCCTGGAACATGGCGATATCCTGTTTC
TGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAGTCCCGGAAGA
GGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCTCAGAGAACGT
GCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTTTGGCTAGACA
TTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGCCCACTCTCTT
CTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTATCGCCTAGAGC
AAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCAAAGAAGATTA
AGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAGTGGGCTGAGC
TGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGGTGCACGTGTT
CTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGGAGGGTGCGAT
GTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGGCTTCAGATGC
GTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGAGATCCTCCCA
GGCTGGTTGCAGTTAGATGACGCCTCGTGTACTTCCATCGCGCAATGTGT
CTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAACGACCAGGCG
ACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGCGGATTAATGG
TTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAAGAGGTCGTAC
CGTATTTGAAACAATACTACTTGGATACGATAACTTCGATCAATGAAGCA
CTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCTTGGCGGTCTT
GATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAATGGTCCAAGC
GGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTTAGACGTTCAC
AGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTCACAAGATTAT
ATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGTCTTGCAGCCG
CCGCATTCTACCGAGTACTAGTAAATTCGACACTACTGCTCTCCCCTCCG
CCGCTTCCTTTCGTCGCACTGTCTGGCCAGAACGCATCCGAGATAGAAAA
TCACTTGCTCCTTGGCACCATGAACCTAGTCAATCGCTTAAACGTCCTCA
ACAAACTCCCTCTCGAGTCGGAACTCCGACAAGTGATGCATGGACTAAGA
GCCTACACAGCAAATATCGACGACTATATTTCTGGACGCAGTCCATCCTA
CAGTCCCCAGGCAATGTGTGACCAGCGCAATTTAGTCCAGTATCATCTGA
TGAGCATAGGGCCCATTGCCGGCACAGGACTTGGGGCTATATCCGAAGTC
TGTCGACTAGCGACAATTATCTACAGCATCGGAGTGACATTTCCACTTTC
TGGCGTCCGAGCTCCTTTTGGAACTCTGGCCATGACATTACAGTCTGAGT
TAGAAAAGAATGATCTTCTCAACAACTGGCCGATCCTGGAACATGGCGAT
ATCCTGTTTCTGTGGATCCTGATGGTGGGCGGTATAGCAGCTAGGGACAG
TCCCGGAAGAGGCTGGTTCATCGAGTGCTTGTCTGAGATTATGTTTGTCT
CAGAGAACGTGCAGTGGAGCTGCGTGAAAGAAAAGCTACAGATGATACTT
TGGCTAGACATTGCTTGCGATATGGCGGGCAGAGACGTCTGGAGTGAAGC
CCACTCTCTTCTGCAAAATCGAGCGCAAAGGGCAAAATCAGTCCCTTTAT
CGCCTAGAGCAAACCAGAAGTTGAAGGCACCTTGTGCCCACTGTCGATCA
AAGAAGATTAAGTGCGATAAGGATGATCCTTGTCAGAATTGTGTCAGAAG
TGGGCTGAGCTGCGGCTCAGCTGGAGCCAGTGCGGCTTTCCAGGCAAGGG
TGCACGTGTTCTCCATGCGACAGAAGCCGTGTGATCTGTGTCGACGACGG
AGGGTGCGATGTGATAAGGAGAAGCCGTGCAAGCGCTGCAAAGATGGTGG
CTTCAGATGCGTTTACAGAGAAGACCAATGGGTTGAAAGCTTGGAATTGA
GATCCTCCCAGGCTGGTTGCAGTTAGATGACGCCTCGTGTACTTCCATCG
CGCAATGTGTCTAATCCGTATCTCCAATACTGGTTTCCTATGTCACTGAA
CGACCAGGCGACATTTAAGGCTATCGTACTATCCTCTCTATCTCATGAGC
GGATTAATGGTTTGATCTCAGCAAACATGGCTAGCCTGACATCGACCAAA
GAGGTCGTACCGTATTTGAAACAATACTACTTGGATACGATAACTTCGAT
CAATGAAGCACTACACGATTCTGCTCGAGCAACTGCTGATGCGACTATCT
TGGCGGTCTTGATGATGGTCGAAAAGCCATTGCTTCAGGATCATAATGAA
TGGTCCAAGCGGTCTCCATTCCAGGCACCTCTCCATGGATTACAGTGGTT
AGACGTTCACAGTGCTAGAGAGCCCAATCTGGTCCACCAGATGGGTCTTC
ACAAGATTATATCCTTGAGGGGTGGCCTTGCTCAAGTCAAGACCCCCGGT
CTTGCAGCCGCCGCATTCTA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0000981DNA-binding transcription factor activity, RNA polymerase II-specific
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52528ASPNIDRAFT_52528Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52528-T1ASPNIDRAFT_52528-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52528-T1.cdsASPNIDRAFT_52528-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52528-T1.exon3ASPNIDRAFT_52528-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52528-T1.exon2ASPNIDRAFT_52528-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52528-T1.exon1ASPNIDRAFT_52528-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52528-T1.utr5p2ASPNIDRAFT_52528-T1.utr5p2Aspergillus niger ATCC 1015five_prime_UTR
ASPNIDRAFT_52528-T1.utr5p1ASPNIDRAFT_52528-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036864
DBxrefInterPro:IPR001138
DBxrefPFAM:PF00172
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2873474..2875404 -
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