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ASPNIDRAFT_52536-T1, ASPNIDRAFT_52536-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52536-T1
Unique NameASPNIDRAFT_52536-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2812627..2813542-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52536-T1 ID=ASPNIDRAFT_52536-T1|Name=ASPNIDRAFT_52536-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=916bp|location=Sequence derived from alignment at ACJE01000021.1:2812627..2813542- (Aspergillus niger ATCC 1015)
CTGTTTCCTCCCCTCACTCGGTCACTGCGCACTTGACTTTGCGGATAACT
GCCAAACCTATCTGGCTCCCCTTGTTCCTTTCTACTATCTCAATAGCTTC
CGAGACATCGCCAGTACCCCGCCGCAATGTCGACCTCTGCCCGCCGTCGT
CTCATGCGCGACTTCAAGGTGTGTTTATGACGAGCATGGTTCTGAACTTG
CTTTCTATCCTACGTTTCTACCCTTTCTCTGTTTACTTTGATCTTGTTTT
GTCCTTTTCGTCCTCCCCGTCTGGTTTTTATACTTAAAGGGCACCTGAAA
TGTTCTGTCATTGGATACGGTTAGTGGTTGCGTGAGCTAACCTAACATTC
TTCTACGCAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTC
CTGTGGCGGACAATGTCATGACCTGGTAAGCTGATCCAGTCACACCTAAT
GTCGGCCTTTTGAGTCCCTAACCTTTGTTACGTCTAGGAACGCCGTCATC
ATCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCAT
GCACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCA
GTCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGAC
ATTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGAC
CAGTATTCAAAGGTACGGACCCTTACAATCAGGGTAAAGCTGAAGGAAGA
TGAAGCACGAAACATGCTAACGAGTGTTTCACTTGCTTGTAGTCTGTTGA
ACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAAACCTTTAC
AAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACCGTCGAGAA
GAGCTGGGAGGACTAG
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Coding sequence (CDS) from alignment at ACJE01000021.1:2812627..2813542-

>ASPNIDRAFT_52536-T1 ID=ASPNIDRAFT_52536-T1|Name=ASPNIDRAFT_52536-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1824bp|location=Sequence derived from alignment at ACJE01000021.1:2812627..2813542- (Aspergillus niger ATCC 1015)
TCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAGCGTCAA
ACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGCGAGACC
GTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCATCGGCCCCGCTG
ATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTCGAGGAG
CAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGATGTTCCA
CCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTACAGAACC
GTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATTCAAAGC
GTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTGGCGGAC
AATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGTCTCATGCGCGAC
TTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGGCGAATGTAGAAG
CGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGCGTGCGC
GAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCATCGGCC
CCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATGCACTTC
GAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAGTCAGAT
GTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACATTCTAC
AGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACCAGTATT
CAAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCTCCTGTG
GCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGTCTCATG
CGCGACTTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGGCGAATG
TAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATCAAGCGC
GTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCGTCATCA
TCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTTGTCATG
CACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTTTATCAG
TCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTCTGGACA
TTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATCCTGACC
AGTATTCAAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCTGCCTCT
CCTGTGGCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGCCGTCGT
CTCATGCGCGACTTCAAGTCTGTTGAACGATCCCAACACATCATCTCCGG
CGAATGTAGAAGCGTCAAACCTTTACAAAGACAACCGGAAGGAGTACATC
AAGCGCGTGCGCGAGACCGTCGAGAAGAGCTGGGAGGACTAGGAACGCCG
TCATCATCGGCCCCGCTGATACTCCCTTTGAAGATGGCACTTTCCGCCTT
GTCATGCACTTCGAGGAGCAGTACCCAAACAAGCCTCCGGGCGTCAAGTT
TATCAGTCAGATGTTCCACCCCAACGTCTACGGTACGGGCGAGCTCTGTC
TGGACATTCTACAGAACCGTTGGAGCCCAACCTATGACGTGGCAGCCATC
CTGACCAGTATTCAAAGCGTATGCAAACTGACCCTCCTGCTGGAGTTTCT
GCCTCTCCTGTGGCGGACAATGTCATGACCTGATGTCGACCTCTGCCCGC
CGTCGTCTCATGCGCGACTTCAAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
UBC2ASPNIDRAFT_52536Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52536-T1ASPNIDRAFT_52536-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52536-T1.cdsASPNIDRAFT_52536-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52536-T1.exon4ASPNIDRAFT_52536-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52536-T1.exon3ASPNIDRAFT_52536-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52536-T1.exon2ASPNIDRAFT_52536-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52536-T1.exon1ASPNIDRAFT_52536-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52536-T1.utr5p1ASPNIDRAFT_52536-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR023313
DBxrefInterPro:IPR000608
DBxrefInterPro:IPR016135
DBxrefPFAM:PF00179
ProductUbiquitin-conjugating enzyme E2 2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2812627..2813542 -
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