You are here

Home

ASPNIDRAFT_52540-T1, ASPNIDRAFT_52540-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52540-T1
Unique NameASPNIDRAFT_52540-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2781080..2782785-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52540-T1 ID=ASPNIDRAFT_52540-T1|Name=ASPNIDRAFT_52540-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1706bp|location=Sequence derived from alignment at ACJE01000021.1:2781080..2782785- (Aspergillus niger ATCC 1015)
ATGGATCCAGAGTCAGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCA
GGACGCTCTCACACGGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCC
CTTGGAAGGGACGACTAGGTTATGTAAGTTTGCATCATCATTCTTTCAAA
CCAATCCTTATGCTGTATAGGCATGTCTGAATACGTATCTACGATATGCG
ACCCCGCCCGTTTTCTGCTCCCGGACTTGCCGCATTGCCTCCATCCTGGA
AAACAGACATCCACTCTCGGATCCTTCGCAGGCCCCTCATCCGACCAAGA
ACCGTCCTGATCGTGATCAGCCCGCTGATGTCGCACGCGGTCAGGCATAT
GTTGAGGCTATATGCCTCACCAATGCTCGCGATCTCGTCAAAATGCTGCG
CTGGAATGACCGCTACGGAATCAAGTTCATGCGATTGAGCAGCGAGATGT
TTCCATTTGCGAGCCACAAGGAGTACGGCTACAAGTTGGCTCCCTTTGCC
TCTGAAGTACTGGCAGAAGCTGGTCGTGTCGTTGCCGAGCTCGGTCATCG
CGTGAGCGTTCATCCCGGTCAATTCACGCAATTGGGCTCTCCTAAAGACG
AAGTAGTGGAAAGCTCCATTCGAGATCTGGAATACCACTCGGAAATGCTC
CAGTTGCTCCAGCTGCCACCTCAACAGGATAGGGATGCTGTTATGATTCT
GCACATGGGCGGCGTCTTTGGTGACAAAGAAGCCACTCTTGACCGGTTTA
GAGAGAATTATCGAGGCCTATCGCAGGACATCAAAAATCGGCTTGTTTTG
GAGAACGACGATGTCAGCTGGTCGGTCCACGACCTCCTGCCCATTTGTGA
AGAACTGAACATACCCCTGGTACTCGACTTTCACCACCACAATATCATCT
TTGATTCGAGCCAGCTCCGCGAGGGCACGCTGGACATCATGTCCTTGTTT
GATCGGATCAAGGCGACATGGACCCGGAAGGGCATCACGCAGAAGATGCA
CTATTCTGAGCCAGAACCATCTGCCATCACGAACCGCCAACGTCGGAAGC
ATAGCCCCCGGGTCTCCACTCTTCCACCGTGCGATTCCACCATGGATCTG
ATGATCGAGGCCAAGGACAAGGAGCAAGCTGTTTTCGAATTGATGCGGAC
ATTTAAGCTGCCGGGTCACGAACTTGTCAACGATATCATTCCTCACGTGC
GTAATGACGAAAACAGGCCACATAAGCCGCCGAGGAAGACCAAGAAGAAC
GGGGGCTTTGTGGATCTGGAGGGACTGGTCCCACCTCCTCAGACTGTCCC
TGAAGAAGAAGTGGGCATGGGTGGTCCGGAGGGACGGGTCTACTGGCCTC
CTGGCATGGAGGAATGGCTTCGACCGAAGAAGATTGTTCGCACCAAAGCC
ATCCAGAGCCCTCGCCGCACTCCTTCCACAAAGAAAGTCGCGGTCGAAAA
TGGCGATTCTGTACCACAGGAAGAACCGGATGGAAGCGCGCTAGCTACGC
CGGTGTCAAAGAAGAAGACGCCTAATGTGAAGAAACCGGTCTCCAGGAAG
CGGAAAGCTTCTCCGGCGACTACACCGTCAGCTTCAGATGAAGAAGCACC
CGAAATCCCTGAGAGGCCGGCTCCTAAGCGATCCCAGAGCAGTGGTGTTC
GTCGAAGCCGACGAGCAAAGAAGGTGGACTACGCCGAAGATGAAGACTCG
GTCTGA
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2781080..2782785-

>ASPNIDRAFT_52540-T1 ID=ASPNIDRAFT_52540-T1|Name=ASPNIDRAFT_52540-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3318bp|location=Sequence derived from alignment at ACJE01000021.1:2781080..2782785- (Aspergillus niger ATCC 1015)
GCATGTCTGAATACGTATCTACGATATGCGACCCCGCCCGTTTTCTGCTC
CCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACATCCACTCTCGG
ATCCTTCGCAGGCCCCTCATCCGACCAAGAACCGTCCTGATCGTGATCAG
CCCGCTGATGTCGCACGCGGTCAGGCATATGTTGAGGCTATATGCCTCAC
CAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGACCGCTACGGAA
TCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTGCGAGCCACAAG
GAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTACTGGCAGAAGC
TGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGTTCATCCCGGTC
AATTCACGCAATTGGGCTCTCCTAAAGACGAAGTAGTGGAAAGCTCCATT
CGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTCCAGCTGCCACC
TCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGGCGGCGTCTTTG
GTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATTATCGAGGCCTA
TCGCAGGACATCAAAAATCGGCTTGTTTTGGAGAACGACGATGTCAGCTG
GTCGGTCCACGACCTCCTGCCCATTTGTGAAGAACTGAACATACCCCTGG
TACTCGACTTTCACCACCACAATATCATCTTTGATTCGAGCCAGCTCCGC
GAGGGCACGCTGGACATCATGTCCTTGTTTGATCGGATCAAGGCGACATG
GACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGAGCCAGAACCAT
CTGCCATCACGAACCGCCAACGTCGGAAGCATAGCCCCCGGGTCTCCACT
CTTCCACCGTGCGATTCCACCATGGATCTGATGATCGAGGCCAAGGACAA
GGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCTGCCGGGTCACG
AACTTGTCAACGATATCATTCCTCACGTGCGTAATGACGAAAACAGGCCA
CATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGCTTTGTGGATCTGGA
GGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGAAGTGGGCATGG
GTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGGAGGAATGGCTT
CGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGCCCTCGCCGCAC
TCCTTCCACAAAGAAAGTCGCGGTCGAAAATGGCGATTCTGTACCACAGG
AAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAAAGAAGAAGACG
CCTAATGTGAAGAAACCGGTCTCCAGGAAGCGGAAAGCTTCTCCGGCGAC
TACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCCTGAGAGGCCGG
CTCCTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCCGACGAGCAAAG
AAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGAATGGATCCAGAGTC
AGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCAGGACGCTCTCACAC
GGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCCCTTGGAAGGGACGA
CTAGGTTATGCATGTCTGAATACGTATCTACGATATGCGACCCCGCCCGT
TTTCTGCTCCCGGACTTGCCGCATTGCCTCCATCCTGGAAAACAGACATC
CACTCTCGGATCCTTCGCAGGCCCCTCATCCGACCAAGAACCGTCCTGAT
CGTGATCAGCCCGCTGATGTCGCACGCGGTCAGGCATATGTTGAGGCTAT
ATGCCTCACCAATGCTCGCGATCTCGTCAAAATGCTGCGCTGGAATGACC
GCTACGGAATCAAGTTCATGCGATTGAGCAGCGAGATGTTTCCATTTGCG
AGCCACAAGGAGTACGGCTACAAGTTGGCTCCCTTTGCCTCTGAAGTACT
GGCAGAAGCTGGTCGTGTCGTTGCCGAGCTCGGTCATCGCGTGAGCGTTC
ATCCCGGTCAATTCACGCAATTGGGCTCTCCTAAAGACGAAGTAGTGGAA
AGCTCCATTCGAGATCTGGAATACCACTCGGAAATGCTCCAGTTGCTCCA
GCTGCCACCTCAACAGGATAGGGATGCTGTTATGATTCTGCACATGGGCG
GCGTCTTTGGTGACAAAGAAGCCACTCTTGACCGGTTTAGAGAGAATTAT
CGAGGCCTATCGCAGGACATCAAAAATCGGCTTGTTTTGGAGAACGACGA
TGTCAGCTGGTCGGTCCACGACCTCCTGCCCATTTGTGAAGAACTGAACA
TACCCCTGGTACTCGACTTTCACCACCACAATATCATCTTTGATTCGAGC
CAGCTCCGCGAGGGCACGCTGGACATCATGTCCTTGTTTGATCGGATCAA
GGCGACATGGACCCGGAAGGGCATCACGCAGAAGATGCACTATTCTGAGC
CAGAACCATCTGCCATCACGAACCGCCAACGTCGGAAGCATAGCCCCCGG
GTCTCCACTCTTCCACCGTGCGATTCCACCATGGATCTGATGATCGAGGC
CAAGGACAAGGAGCAAGCTGTTTTCGAATTGATGCGGACATTTAAGCTGC
CGGGTCACGAACTTGTCAACGATATCATTCCTCACGTGCGTAATGACGAA
AACAGGCCACATAAGCCGCCGAGGAAGACCAAGAAGAACGGGGGCTTTGT
GGATCTGGAGGGACTGGTCCCACCTCCTCAGACTGTCCCTGAAGAAGAAG
TGGGCATGGGTGGTCCGGAGGGACGGGTCTACTGGCCTCCTGGCATGGAG
GAATGGCTTCGACCGAAGAAGATTGTTCGCACCAAAGCCATCCAGAGCCC
TCGCCGCACTCCTTCCACAAAGAAAGTCGCGGTCGAAAATGGCGATTCTG
TACCACAGGAAGAACCGGATGGAAGCGCGCTAGCTACGCCGGTGTCAAAG
AAGAAGACGCCTAATGTGAAGAAACCGGTCTCCAGGAAGCGGAAAGCTTC
TCCGGCGACTACACCGTCAGCTTCAGATGAAGAAGCACCCGAAATCCCTG
AGAGGCCGGCTCCTAAGCGATCCCAGAGCAGTGGTGTTCGTCGAAGCCGA
CGAGCAAAGAAGGTGGACTACGCCGAAGATGAAGACTCGGTCTGAATGGA
TCCAGAGTCAGACGAAGATGTACCAGTTGAGGCAGAGGAGCTTCAGGACG
CTCTCACACGGGCGCCGCCGGTCAACAGCAGCTACCTACCCCTCCCTTGG
AAGGGACGACTAGGTTAT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0004519endonuclease activity
Vocabulary: Biological Process
TermDefinition
GO:0006289nucleotide-excision repair
GO:0009411response to UV
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
MUS18ASPNIDRAFT_52540Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52540-T1ASPNIDRAFT_52540-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52540-T1.cdsASPNIDRAFT_52540-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52540-T1.exon2ASPNIDRAFT_52540-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52540-T1.exon1ASPNIDRAFT_52540-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteantiSMASH:Cluster_10000211.7
DBxrefInterPro:IPR036237
DBxrefInterPro:IPR004601
DBxrefPFAM:PF03851
ProductUV-damage endonuclease
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2781080..2782785 -
Powered by Drupal