You are here

Home

ASPNIDRAFT_52588-T1, ASPNIDRAFT_52588-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52588-T1
Unique NameASPNIDRAFT_52588-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:2356007..2356601-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52588-T1 ID=ASPNIDRAFT_52588-T1|Name=ASPNIDRAFT_52588-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=595bp|location=Sequence derived from alignment at ACJE01000021.1:2356007..2356601- (Aspergillus niger ATCC 1015)
CCTCCACAACCCCACAACTCCACCCCATCATGTCCAAACTCTCCGCTACT
ATCTCCAAGGTACTTCCCCATATCCACAGCCCCCACACCATCCCTCAAAT
CTAATAACAATAACAATAACCTCTCACCACCCCAGCTCTCCCTCTCCACC
ATAACCACCACCCTCCTCCTCCTTACCCCCCCAACCACGGCCTACTTCTA
CAACTACCCCGCCCTCTTCGTCTACAAAGACACCAACTGCACGGACATCT
CCTTCTCGCTGGTCTACCCCTCCCTGGGCGACTGCAACGGTGGATACTAT
GACTACGCGGGTTCATTCCAGATGTTCAATATTGATGCTGCGTATACCTG
TAATGGCAGTGACTCGACACTGATGTTTGAGATGTATAATAGCTCCGGCT
CGGATTGTGGAGATGAGAGTGATTTGTTGTTCAGACAGCCGGTGACGGAG
GAGTGTACTGTTGCGGATGTGGAGAGTCCGGGGCCGTTGGAGATGCCGGT
TTGGTTTGAGTTGGGGTGTATGTAATTGACTCGTTGAGTTGGTGGGGAGG
AATGGATTTGGAGGTGGGGGGGTTATTATATAGGTAGGTTGGTGG
back to top

Coding sequence (CDS) from alignment at ACJE01000021.1:2356007..2356601-

>ASPNIDRAFT_52588-T1 ID=ASPNIDRAFT_52588-T1|Name=ASPNIDRAFT_52588-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=840bp|location=Sequence derived from alignment at ACJE01000021.1:2356007..2356601- (Aspergillus niger ATCC 1015)
CTCTCCCTCTCCACCATAACCACCACCCTCCTCCTCCTTACCCCCCCAAC
CACGGCCTACTTCTACAACTACCCCGCCCTCTTCGTCTACAAAGACACCA
ACTGCACGGACATCTCCTTCTCGCTGGTCTACCCCTCCCTGGGCGACTGC
AACGGTGGATACTATGACTACGCGGGTTCATTCCAGATGTTCAATATTGA
TGCTGCGTATACCTGTAATGGCAGTGACTCGACACTGATGTTTGAGATGT
ATAATAGCTCCGGCTCGGATTGTGGAGATGAGAGTGATTTGTTGTTCAGA
CAGCCGGTGACGGAGGAGTGTACTGTTGCGGATGTGGAGAGTCCGGGGCC
GTTGGAGATGCCGGTTTGGTTTGAGTTGGGGTGTATGTAAATGTCCAAAC
TCTCCGCTACTATCTCCAAGCTCTCCCTCTCCACCATAACCACCACCCTC
CTCCTCCTTACCCCCCCAACCACGGCCTACTTCTACAACTACCCCGCCCT
CTTCGTCTACAAAGACACCAACTGCACGGACATCTCCTTCTCGCTGGTCT
ACCCCTCCCTGGGCGACTGCAACGGTGGATACTATGACTACGCGGGTTCA
TTCCAGATGTTCAATATTGATGCTGCGTATACCTGTAATGGCAGTGACTC
GACACTGATGTTTGAGATGTATAATAGCTCCGGCTCGGATTGTGGAGATG
AGAGTGATTTGTTGTTCAGACAGCCGGTGACGGAGGAGTGTACTGTTGCG
GATGTGGAGAGTCCGGGGCCGTTGGAGATGCCGGTTTGGTTTGAGTTGGG
GTGTATGTAAATGTCCAAACTCTCCGCTACTATCTCCAAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52588ASPNIDRAFT_52588Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52588-T1ASPNIDRAFT_52588-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52588-T1.cdsASPNIDRAFT_52588-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52588-T1.utr3p1ASPNIDRAFT_52588-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52588-T1.exon2ASPNIDRAFT_52588-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52588-T1.exon1ASPNIDRAFT_52588-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52588-T1.utr5p1ASPNIDRAFT_52588-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-29)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:2356007..2356601 -
Powered by Drupal