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ASPNIDRAFT_52670-T1, ASPNIDRAFT_52670-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52670-T1
Unique NameASPNIDRAFT_52670-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:1405748..1407167+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52670-T1 ID=ASPNIDRAFT_52670-T1|Name=ASPNIDRAFT_52670-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1420bp|location=Sequence derived from alignment at ACJE01000021.1:1405748..1407167+ (Aspergillus niger ATCC 1015)
ATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGAT
CTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGG
CCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTC
TGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTT
CTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGGGTATGTGAGC
TCCCCTACTGTGGCGCCTCCCGGCCCTCCTGGTGCTGCATGTCTCCTTTC
CCGCCCGCTTCGGCAGTTCAATGATCCCCCACACCATTACGTTCCATGCT
AATGTATCCAACCCGCAAAGGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATCTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATGTATGTCCGGATTCAAGCTACCCCCCAACTTCTACCTCCCGAGCC
TTGAAACTGACATGATGCGGTCTTGTATAGTCGAATCATTACAGCCTCTT
TACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACCT
GGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCAT
TTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCC
ATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCA
AGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGG
AGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGG
TTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACGGATTTCAG
CGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGC
TGGCGGAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGC
CGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAA
GAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTGCGGGAGC
TGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTC
AGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCA
TCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAG
AGGCAAAGTTGTCCCGATAA
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Coding sequence (CDS) from alignment at ACJE01000021.1:1405748..1407167+

>ASPNIDRAFT_52670-T1 ID=ASPNIDRAFT_52670-T1|Name=ASPNIDRAFT_52670-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3645bp|location=Sequence derived from alignment at ACJE01000021.1:1405748..1407167+ (Aspergillus niger ATCC 1015)
ATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGAACGGTACTGGGAGAT
CTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGAACAACTCCCAAGCGG
CCTCGGTACTCAGGAACAGTCGGCTTCGTGATGACCAACTGGAAAAGGTC
TGGGACCTGGCAGATGTCGACGGCGATGGCGAACTAGACTTTGAGGAGTT
CTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGAACGGGGAATTACAAG
CAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCCGAATCCAAAGCTCAT
TTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCCGGAGCAGTTCGAGCG
GATAGAAGACGAGGACGATACTCCCGGCCTGAAAGATGGGTTTGAATGGT
ACATGAACCCGTCTGATAAGTCTAAATATGAAGAAATCTATCTCGCGAAC
AAAAACCGCCGCGGGGAAATCTCATTCGAATCATTACAGCCTCTTTACGA
CTCTCTCGACGTCCCGGACACGGACATCCGCTCTGCATGGAACCTGGTCA
ACCCTTCTGCATCCCCGACCATCAACAAAGACGCTACCCTTGCATTTCTG
CATATGCTCAACTACCGCCACGAGGGCTTCCGCATTCCCCGCGCCATTCC
TGCGTCTCTGCGCGCTTCATTCGAGAACAACCATATTGACTACCAAGTCG
ACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGCGGCGATACGGAGACC
CTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTATCTGAGTCGGTTGGG
TGCTGGAGGAAAGACCTCCTATACACCCAAGGGAACGGATTTCAGCGACA
CCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTGAGGCGCGAGCTGGCG
GAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGCCTCCGAAGGCCGACG
CGATCGACCTCGAAACGACGGTCGGCCCAACTGGGTGTTGATCAAGAAAG
AAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAGCTGCGGGAGCTGCGT
GAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGTAGAACGTCTCAGAGA
TGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGATTGAAGAGCCATCTGG
CGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCACAGGTCGAAGAGGCA
AAGTTGTCCCGATAAATGTCAACCAAGAAGATCGAGCAGTGGGAAATCGA
ACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCGGCCAGCCGCGTCTGA
ACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGTCGGCTTCGTGATGAC
CAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGACGGCGATGGCGAACT
AGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGGTGTTCGACCTTGTGA
ACGGGGAATTACAAGCAGTCCCAAACGTCCTGCCGGACTGGCTCGTGCCC
GAATCCAAAGCTCATTTAGTCCATGCGACCCGAGCCCTGAGCGGTCGTCC
GGAGCAGTTCGAGCGGATAGAAGACGAGGACGATACTCCCGGCCTGAAAG
ATGGGTTTGAATGGTACATGAACCCGTCTGATAAGTCTAAATATGAAGAA
ATCTATCTCGCGAACAAAAACCGCCGCGGGGAAATCTCATTCGAATCATT
ACAGCCTCTTTACGACTCTCTCGACGTCCCGGACACGGACATCCGCTCTG
CATGGAACCTGGTCAACCCTTCTGCATCCCCGACCATCAACAAAGACGCT
ACCCTTGCATTTCTGCATATGCTCAACTACCGCCACGAGGGCTTCCGCAT
TCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCATTCGAGAACAACCATA
TTGACTACCAAGTCGACAATGCCCGTCCCGCCCAGAAATGGGGCGCAAGC
GGCGATACGGAGACCCTCACAGGCCGGAAGGCCAAGTTCGGAGATACCTA
TCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCTATACACCCAAGGGAA
CGGATTTCAGCGACACCATCCAGGATGAAGAGTGGGAGAAGGTCCGGTTG
AGGCGCGAGCTGGCGGAGATGGAGTCTAAGCTGGATTCCGCTAGGAAGGC
CTCCGAAGGCCGACGCGATCGACCTCGAAACGACGGTCGGCCCAACTGGG
TGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAGTACAAGGAGCGGGAG
CTGCGGGAGCTGCGTGAAGGCGCAGGCCGATCCAAAGACGGCCAGAACGT
AGAACGTCTCAGAGATGATGTCAAGACCGTTGGCGAGCAGGTCGAGGGAT
TGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTCTCTGATCTGCGGGCA
CAGGTCGAAGAGGCAAAGTTGTCCCGATAAATGTCAACCAAGAAGATCGA
GCAGTGGGAAATCGAACGGTACTGGGAGATCTTCGCATCGCTGGCAGGCG
GCCAGCCGCGTCTGAACAACTCCCAAGCGGCCTCGGTACTCAGGAACAGT
CGGCTTCGTGATGACCAACTGGAAAAGGTCTGGGACCTGGCAGATGTCGA
CGGCGATGGCGAACTAGACTTTGAGGAGTTCTGTGTTGCCATGCGATTGG
TGTTCGACCTTGTGAACGGGGAATTACAAGCAGTCCCAAACGTCCTGCCG
GACTGGCTCGTGCCCGAATCCAAAGCTCATTTAGTCCATGCGACCCGAGC
CCTGAGCGGTCGTCCGGAGCAGTTCGAGCGGATAGAAGACGAGGACGATA
CTCCCGGCCTGAAAGATGGGTTTGAATGGTACATGAACCCGTCTGATAAG
TCTAAATATGAAGAAATCTATCTCGCGAACAAAAACCGCCGCGGGGAAAT
CTCATTCGAATCATTACAGCCTCTTTACGACTCTCTCGACGTCCCGGACA
CGGACATCCGCTCTGCATGGAACCTGGTCAACCCTTCTGCATCCCCGACC
ATCAACAAAGACGCTACCCTTGCATTTCTGCATATGCTCAACTACCGCCA
CGAGGGCTTCCGCATTCCCCGCGCCATTCCTGCGTCTCTGCGCGCTTCAT
TCGAGAACAACCATATTGACTACCAAGTCGACAATGCCCGTCCCGCCCAG
AAATGGGGCGCAAGCGGCGATACGGAGACCCTCACAGGCCGGAAGGCCAA
GTTCGGAGATACCTATCTGAGTCGGTTGGGTGCTGGAGGAAAGACCTCCT
ATACACCCAAGGGAACGGATTTCAGCGACACCATCCAGGATGAAGAGTGG
GAGAAGGTCCGGTTGAGGCGCGAGCTGGCGGAGATGGAGTCTAAGCTGGA
TTCCGCTAGGAAGGCCTCCGAAGGCCGACGCGATCGACCTCGAAACGACG
GTCGGCCCAACTGGGTGTTGATCAAGAAAGAAGCACTCCAGCTGCTGGAG
TACAAGGAGCGGGAGCTGCGGGAGCTGCGTGAAGGCGCAGGCCGATCCAA
AGACGGCCAGAACGTAGAACGTCTCAGAGATGATGTCAAGACCGTTGGCG
AGCAGGTCGAGGGATTGAAGAGCCATCTGGCGCAACGGAAGGAAGTGCTC
TCTGATCTGCGGGCACAGGTCGAAGAGGCAAAGTTGTCCCGATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006897endocytosis
GO:0007015actin filament organization
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
GO:0005509calcium ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
END3ASPNIDRAFT_52670Aspergillus niger ATCC 1015gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52670-T1.exon1ASPNIDRAFT_52670-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52670-T1.exon2ASPNIDRAFT_52670-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52670-T1.exon3ASPNIDRAFT_52670-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52670-T1.cdsASPNIDRAFT_52670-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52670-T1ASPNIDRAFT_52670-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR011992
DBxrefInterPro:IPR018247
DBxrefInterPro:IPR025604
DBxrefInterPro:IPR000261
DBxrefInterPro:IPR002048
DBxrefPFAM:PF12761
DBxrefPFAM:PF12763
DBxrefPFAM:PF00036
Productendocytosis defective- protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:1405748..1407167 +
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