|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:1182150..1183391- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52699-T1 ID=ASPNIDRAFT_52699-T1|Name=ASPNIDRAFT_52699-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1242bp|location=Sequence derived from alignment at ACJE01000021.1:1182150..1183391- (Aspergillus niger ATCC 1015)
CTCTTACTGACTATAAAGCTCTCCCCAAATACAGACATCACTCCTCACAT
CAACTTTTCTTGCCAAGGAAAATGAGGTGCATGAACCAAAGCACGTTTCT
CCAAAACTATGTCTATGCCCTTGAGCATGACTTCTGCTCTCCCACTGGGG
AGCCTGCCACCTGGGCGATTGGATATCCCAAGTACTGGGGTCAGGAAGCA
GCGAAGATCCAACTAGAGGGGCAGGCAAATGCGCTTGCTCTTAGCCCTGA
TAGCAAGATTATTGCCGTGGGGATTGACACCGAGATCCATATCTTTGATG
CGGATACGCGGAAACGTATTGAGGTGTTGAGAGGACACACGGGCACCGTG
GAGAAGGTGAAGTTCGCTCCAGAAATTATCAATACCGTGGATTCAGAAGA
CACCCGGTACATCCTGGTGTCGACAGGCGAGGAACTTGAAGAGAGTGATG
GAGATAGTGACCGCCATGAGGGATGTGATTTCGGGATCATCATCCTATGG
GAGCTGGACGAGCGCGGGAGACTCCGACAAAAGAAAGAGAAGCCAGTTGA
CATTGACACCCTCACAAGCAGAACTCTCCAACCCCTTATGTCAGACCTAG
TGTCCAACCACGGCTGGAAAAGTGATGAAAAAGCCATGGGGGCCCTAGAC
CAAGCCATGAAAAAAGCCCTCCGAAAAGCCCTCCATCTACACGAACAAGA
AAGCAAACACTATCTTCGAGGCGAACTAGCCTCCTTCGGTAGTCCCACAT
TCAGTTCAGACGGCAAGACATTGATCTATCTCAGCCAAAACGAAACAACC
CAGCACGGACCTCGTGACCCTGCTCTCCTCCCATGCCTCAACCTCTGGGA
CATGCAGACCCGGTCCCTCCGACACCGACTGCTCGGCCACACAGACGCCA
TAATGTGGGCTGGGATGAGTCCAGACAATTCTCTAGTCGCGTCCATCGCA
TGGGATGGCAGGGCACGAGTCTGGGACGCCAACTCCGGAGCCTGCATCCA
TGTACTGGTTTCTGTGGACGGCCAGCTCTGGAGCGGTGCCTTCTCTCCCG
ATAGCAAGTACCTCGCTGTGAGCCAGGGAAGCCCCAGGACATATATCCAT
GTCTACGACCTTCGAACAGGACAGTCCGTCTCTCGCTTCGACGGATTTCG
CCGTTGGGCACGCACCTTGGCTTGGAGCCCTGACGGGACCGTGCTTGCAG
GCGGAGGAGACGGCGGCACAGTGCGTCTTTGGGATCCGTTGA back to topCoding sequence (CDS) from alignment at ACJE01000021.1:1182150..1183391- >ASPNIDRAFT_52699-T1 ID=ASPNIDRAFT_52699-T1|Name=ASPNIDRAFT_52699-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2238bp|location=Sequence derived from alignment at ACJE01000021.1:1182150..1183391- (Aspergillus niger ATCC 1015)
GACAGTCCGTCTCTCGCTTCGACGGATTTCGCCGTTGGGCACGCACCTTG
GCTTGGAGCCCTGACGGGACCGTGCTTGCAGGCGGAGGAGACGGCGGCAC
AGTGCGTCTTTGGGATCCGTTGAATGAGGTGCATGAACCAAAGCACGTTT
CTCCAAAACTATGTCTATGCCCTTGAGCATGACTTCTGCTCTCCCACTGG
GGAGCCTGCCACCTGGGCGATTGGATATCCCAAGTACTGGGGTCAGGAAG
CAGCGAAGATCCAACTAGAGGGGCAGGCAAATGCGCTTGCTCTTAGCCCT
GATAGCAAGATTATTGCCGTGGGGATTGACACCGAGATCCATATCTTTGA
TGCGGATACGCGGAAACGTATTGAGGTGTTGAGAGGACACACGGGCACCG
TGGAGAAGGTGAAGTTCGCTCCAGAAATTATCAATACCGTGGATTCAGAA
GACACCCGGTACATCCTGGTGTCGACAGGCGAGGAACTTGAAGAGAGTGA
TGGAGATAGTGACCGCCATGAGGGATGTGATTTCGGGATCATCATCCTAT
GGGAGCTGGACGAGCGCGGGAGACTCCGACAAAAGAAAGAGAAGCCAGTT
GACATTGACACCCTCACAAGCAGAACTCTCCAACCCCTTATGTCAGACCT
AGTGTCCAACCACGGCTGGAAAAGTGATGAAAAAGCCATGGGGGCCCTAG
ACCAAGCCATGAAAAAAGCCCTCCGAAAAGCCCTCCATCTACACGAACAA
GAAAGCAAACACTATCTTCGAGGCGAACTAGCCTCCTTCGGTAGTCCCAC
ATTCAGTTCAGACGGCAAGACATTGATCTATCTCAGCCAAAACGAAACAA
CCCAGCACGGACCTCGTGACCCTGCTCTCCTCCCATGCCTCAACCTCTGG
GACATGCAGACCCGGTCCCTCCGACACCGACTGCTCGGCCACACAGACGC
CATAATGTGGGCTGGGATGAGTCCAGACAATTCTCTAGTCGCGTCCATCG
CATGGGATGGCAGGGCACGAGTCTGGGACGCCAACTCCGGAGCCTGCATC
CATGTACTGGTTTCTGTGGACGGCCAGCTCTGGAGCGGTGCCTTCTCTCC
CGATAGCAAGTACCTCGCTGACAGTCCGTCTCTCGCTTCGACGGATTTCG
CCGTTGGGCACGCACCTTGGCTTGGAGCCCTGACGGGACCGTGCTTGCAG
GCGGAGGAGACGGCGGCACAGTGCGTCTTTGGGATCCGTTGAATGAGGTG
CATGAACCAAAGCACGTTTCTCCAAAACTATGTCTATGCCCTTGAGCATG
ACTTCTGCTCTCCCACTGGGGAGCCTGCCACCTGGGCGATTGGATATCCC
AAGTACTGGGGTCAGGAAGCAGCGAAGATCCAACTAGAGGGGCAGGCAAA
TGCGCTTGCTCTTAGCCCTGATAGCAAGATTATTGCCGTGGGGATTGACA
CCGAGATCCATATCTTTGATGCGGATACGCGGAAACGTATTGAGGTGTTG
AGAGGACACACGGGCACCGTGGAGAAGGTGAAGTTCGCTCCAGAAATTAT
CAATACCGTGGATTCAGAAGACACCCGGTACATCCTGGTGTCGACAGGCG
AGGAACTTGAAGAGAGTGATGGAGATAGTGACCGCCATGAGGGATGTGAT
TTCGGGATCATCATCCTATGGGAGCTGGACGAGCGCGGGAGACTCCGACA
AAAGAAAGAGAAGCCAGTTGACATTGACACCCTCACAAGCAGAACTCTCC
AACCCCTTATGTCAGACCTAGTGTCCAACCACGGCTGGAAAAGTGATGAA
AAAGCCATGGGGGCCCTAGACCAAGCCATGAAAAAAGCCCTCCGAAAAGC
CCTCCATCTACACGAACAAGAAAGCAAACACTATCTTCGAGGCGAACTAG
CCTCCTTCGGTAGTCCCACATTCAGTTCAGACGGCAAGACATTGATCTAT
CTCAGCCAAAACGAAACAACCCAGCACGGACCTCGTGACCCTGCTCTCCT
CCCATGCCTCAACCTCTGGGACATGCAGACCCGGTCCCTCCGACACCGAC
TGCTCGGCCACACAGACGCCATAATGTGGGCTGGGATGAGTCCAGACAAT
TCTCTAGTCGCGTCCATCGCATGGGATGGCAGGGCACGAGTCTGGGACGC
CAACTCCGGAGCCTGCATCCATGTACTGGTTTCTGTGGACGGCCAGCTCT
GGAGCGGTGCCTTCTCTCCCGATAGCAAGTACCTCGCT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_10000211.4 |
| Note | SMCOG1173:WD-40 repeat-containing protein |
| DBxref | InterPro:IPR011047 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR011659 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:1182150..1183391 - |
|
