|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000021.1:835044..836749+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52741-T1 ID=ASPNIDRAFT_52741-T1|Name=ASPNIDRAFT_52741-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1706bp|location=Sequence derived from alignment at ACJE01000021.1:835044..836749+ (Aspergillus niger ATCC 1015)
CACCTGATGAACATATGAGTAGCCATACACAATGCCTGCAATCAACTCAT
CCATGGCTGCGAACCTCCCAATCGAGCTCATCCTCTGTATCCTCGATCAT
GTCGATATCGAGACGTACGTCGCTGCCCGCTCAGCATGTTGCTCATGGCG
CAAAGCAGCGTCAATGTCGTCTACCATCCGGAACGCTTTGACCGAACTCC
CCGTGCCGATACCACCACGTGCCGATGCTCTTACAACCGAAGAATGGAAC
GCATACTTCTGCCAAATCGCTTGCCTGAACCTACTAGGCCACCGGACCCA
CATCGACAAAACAGCCTCCAGACGTGCCCTACCTGAAGACTGCACCCCTA
CCACAATTCTAGCGACATCTCAAGATGGTCTAAAAATGGCAACCCTGAAA
GGCGCACGCGCAACTATCTTCACCCGCTCAAACAAGCAGTCCTCCTGGGA
ATACACCCTAGCCTCAACACTCTACCCCCTCTGGACCTCCGTATACCGTG
CCCTAATGGACGGAGGCGGCACTGGCAGCGGCATGGCGCTCAACCCGCGC
TACGGCAAACGCTGCATTGCCATCTCCTCACAAGGCCACCTCATCGCCGT
CGGCCTAGGCAAGACCCTCCAAATTTACAGCCTCTCCGCGGACGAAGACA
ACGGCATTTCCTCCCCAGCAGAATACTCCCTCGACCAGCACGACGTCATC
CACGCAGCCTCCCCGAGCGCAGGCTACGAAGAAACCGACGGAGTCATCGA
CTCCCTCGAATTCACCGACGACGACATTCTCCTCCGTGTCGCAATCAACC
AAGATACAACAGCCTTTCAACCGAATCGCGTCCGCTATCTGGGTAATCCC
TCCGCCCTAAAATATTCCCCCCATCACAATAACGCATCACACCTCCAATA
CTGGCGCGAAAACATCCACCACATCCACCTCGACTCCGCCTCCATGGCCG
TGACACTAGGCGCAGGCGAAGAGAAAGTCGTATTTCGAGGCCTGCGCCTT
CTTCCTTCTTCTTACAAACCGACCACAACAACACCTCAGATCTCATCATC
ATCTTCATCATCATACTCATCATCGCACTACTTCACCGCATCCCTCCAAT
CAGGCCCCACAGCCGCTTACTGTATCGGCCACATCGCTATCTCCTCCTCC
CCTCCCACATCTCAACAAGTGACTATCACCCGCCTCCTACCTTCTCGCCA
GCACCACACGCTTCCTTCCAGCACCGATCACAAAACAACACCTCCGTCCT
CTCAAACCGCGACAACAATCCCCCGCTGGAACCCCCTCAACCTCCCCACC
GCATCTTCCACAACCCCTATCCTCTCCATCTCTCCGGACAACAAGCTCCT
AGTCATTTACGAACCTGATTCTTCTTCCCAGGGGGGAGGTGGAGGGGGGA
TATACGTGTACTGCATTGAGGAGTGCGAATCCGTGTATACCAACCATACC
AGCGATAAGAATATTGATTCTGCTATGAACACAGACCAGCAAGAGAAACA
TCATTCTTATCCTTGTCCTTCGTCGGAGGAGAGGATCACGTCTTGGTCGT
TCTTATTGGATAATGTATCTGTGGATGTGGATGAGCTGAGAGTTGATAAG
GTCGTTAGGGATGGTAGCGGGTATTATGAGGTGATGGCGTTAGCGGGGAA
GGATGTTTTGGAGTGGAGGATTCATTAATCACTTTTCTCTGGTTATGTAC
TTTACT back to topCoding sequence (CDS) from alignment at ACJE01000021.1:835044..836749+ >ASPNIDRAFT_52741-T1 ID=ASPNIDRAFT_52741-T1|Name=ASPNIDRAFT_52741-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1647bp|location=Sequence derived from alignment at ACJE01000021.1:835044..836749+ (Aspergillus niger ATCC 1015)
ATGCCTGCAATCAACTCATCCATGGCTGCGAACCTCCCAATCGAGCTCAT
CCTCTGTATCCTCGATCATGTCGATATCGAGACGTACGTCGCTGCCCGCT
CAGCATGTTGCTCATGGCGCAAAGCAGCGTCAATGTCGTCTACCATCCGG
AACGCTTTGACCGAACTCCCCGTGCCGATACCACCACGTGCCGATGCTCT
TACAACCGAAGAATGGAACGCATACTTCTGCCAAATCGCTTGCCTGAACC
TACTAGGCCACCGGACCCACATCGACAAAACAGCCTCCAGACGTGCCCTA
CCTGAAGACTGCACCCCTACCACAATTCTAGCGACATCTCAAGATGGTCT
AAAAATGGCAACCCTGAAAGGCGCACGCGCAACTATCTTCACCCGCTCAA
ACAAGCAGTCCTCCTGGGAATACACCCTAGCCTCAACACTCTACCCCCTC
TGGACCTCCGTATACCGTGCCCTAATGGACGGAGGCGGCACTGGCAGCGG
CATGGCGCTCAACCCGCGCTACGGCAAACGCTGCATTGCCATCTCCTCAC
AAGGCCACCTCATCGCCGTCGGCCTAGGCAAGACCCTCCAAATTTACAGC
CTCTCCGCGGACGAAGACAACGGCATTTCCTCCCCAGCAGAATACTCCCT
CGACCAGCACGACGTCATCCACGCAGCCTCCCCGAGCGCAGGCTACGAAG
AAACCGACGGAGTCATCGACTCCCTCGAATTCACCGACGACGACATTCTC
CTCCGTGTCGCAATCAACCAAGATACAACAGCCTTTCAACCGAATCGCGT
CCGCTATCTGGGTAATCCCTCCGCCCTAAAATATTCCCCCCATCACAATA
ACGCATCACACCTCCAATACTGGCGCGAAAACATCCACCACATCCACCTC
GACTCCGCCTCCATGGCCGTGACACTAGGCGCAGGCGAAGAGAAAGTCGT
ATTTCGAGGCCTGCGCCTTCTTCCTTCTTCTTACAAACCGACCACAACAA
CACCTCAGATCTCATCATCATCTTCATCATCATACTCATCATCGCACTAC
TTCACCGCATCCCTCCAATCAGGCCCCACAGCCGCTTACTGTATCGGCCA
CATCGCTATCTCCTCCTCCCCTCCCACATCTCAACAAGTGACTATCACCC
GCCTCCTACCTTCTCGCCAGCACCACACGCTTCCTTCCAGCACCGATCAC
AAAACAACACCTCCGTCCTCTCAAACCGCGACAACAATCCCCCGCTGGAA
CCCCCTCAACCTCCCCACCGCATCTTCCACAACCCCTATCCTCTCCATCT
CTCCGGACAACAAGCTCCTAGTCATTTACGAACCTGATTCTTCTTCCCAG
GGGGGAGGTGGAGGGGGGATATACGTGTACTGCATTGAGGAGTGCGAATC
CGTGTATACCAACCATACCAGCGATAAGAATATTGATTCTGCTATGAACA
CAGACCAGCAAGAGAAACATCATTCTTATCCTTGTCCTTCGTCGGAGGAG
AGGATCACGTCTTGGTCGTTCTTATTGGATAATGTATCTGTGGATGTGGA
TGAGCTGAGAGTTGATAAGGTCGTTAGGGATGGTAGCGGGTATTATGAGG
TGATGGCGTTAGCGGGGAAGGATGTTTTGGAGTGGAGGATTCATTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | EggNog:ENOG41 |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR001810 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000021.1 | supercontig | ACJE01000021.1:835044..836749 + |
|
