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ASPNIDRAFT_52748-T1, ASPNIDRAFT_52748-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52748-T1
Unique NameASPNIDRAFT_52748-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:797257..798614+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52748-T1 ID=ASPNIDRAFT_52748-T1|Name=ASPNIDRAFT_52748-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1358bp|location=Sequence derived from alignment at ACJE01000021.1:797257..798614+ (Aspergillus niger ATCC 1015)
TCGACAACCACCACCCTCCCCCTACATTCTTTTCAGACCACCTTCGTCCC
CAGCAGCCAATATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGA
AAGGGCCAGAGGACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTA
CCCCGTTGATGACGAGTCGCAGCCCAAGAAAGTCAGTACCACACCCCGTG
CAAGAGCCAGAAAATGAGGTGGAAACGGATGCGGTTTCGTTATGAACAAA
TGCGACGGGTTTGCGCTGGTCATTGGGAAAGATTGAACCTCCTGTATAAA
AAAGCTGGAGGTTTGGGGGAAATTCAAAGATTCAGGGCCAGTGCTCTATA
CCGCATGAGTTGATAAGGAAATCGCATCTTGGAGAAATTGGGGCCCCGGA
ATTCGAAATGGACAAGAAGGAATTGGAACAGGCATTCTGACATGGTTATT
TTATATACATATAGGTCCGCAAGGCTATCCGTCCCGCTAAGGTCCGCGAG
AGCCTCCAGCCCGGTACCGTTCTGATCCTCCTCGCCGGCCGCTTCCGTGG
AAAGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCCTCGTCA
CCGGTCCCTTCAAGATCAACGGTGTTCCCCTCCGCCGTGTCAACGCTCGT
TACGTGATCGCCACCAGCACCCGTATCGACATCAGCGGTGTTGACGCCCA
GACCATCGAGAAGGTCTCCGCTGCCGACTACTTCACCAAGGAGAAGAAGG
CTGAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAGCCCCAG
GTATGTGCACATACACACCCGTGGTTGGGCTCTTCCTTCGAGAAGAGTCC
GACTTTTGCGGAAGTGGCCGGATGATACTGATGTAGCGTTTTTTCTCCAT
CAACAGAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGCCGT
TGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAAGCT
ACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAGATG
AAGTGGTAGATGTGTGACGCGGCGGCCGCGGGTTCGGTAGTTATTGTGGA
GGAGTCCTGCGAGGGGCGGCGGCTAGAACCCCCTTTCAATCTTTTGCAAG
CAACTGGTCGAACTTCACAACCGGCACTTGCGAAAGGAAAGGGGGGTCGC
AGGAGGAAACAGCTCATGAAGTATATGTAACTCGATTCGAGCCTCATGTT
TGCTTAGGATTGCGGTTTTTTTAATGCCGAGGTTAAAAAAGGAAAGGAAA
AACCGGTTGTTATTTCATACTTGATCTCCCTCAAAACTGAACTGTCTTCC
TCCAGCAA
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Coding sequence (CDS) from alignment at ACJE01000021.1:797257..798614+

>ASPNIDRAFT_52748-T1 ID=ASPNIDRAFT_52748-T1|Name=ASPNIDRAFT_52748-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1827bp|location=Sequence derived from alignment at ACJE01000021.1:797257..798614+ (Aspergillus niger ATCC 1015)
ATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAAGGGCCAGAG
GACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACCCCGTTGATG
ACGAGTCGCAGCCCAAGAAAGTCCGCAAGGCTATCCGTCCCGCTAAGGTC
CGCGAGAGCCTCCAGCCCGGTACCGTTCTGATCCTCCTCGCCGGCCGCTT
CCGTGGAAAGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGGGTGTTCTCC
TCGTCACCGGTCCCTTCAAGATCAACGGTGTTCCCCTCCGCCGTGTCAAC
GCTCGTTACGTGATCGCCACCAGCACCCGTATCGACATCAGCGGTGTTGA
CGCCCAGACCATCGAGAAGGTCTCCGCTGCCGACTACTTCACCAAGGAGA
AGAAGGCTGAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAGGGAGAGAAG
CCCCAGAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCAGAAGGCCGT
TGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCCTCGGAAGCT
ACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCCCACGAGATG
AAGTGGTAGATGTCGGACTCTACTGTTGGCCAGACGAAGCAGTTTGGAAA
GGGCCAGAGGACCGTCCCTCACCCGGCCCAGAAGGCCCAGAAATGGTACC
CCGTTGATGACGAGTCGCAGCCCAAGAAAGTCCGCAAGGCTATCCGTCCC
GCTAAGGTCCGCGAGAGCCTCCAGCCCGGTACCGTTCTGATCCTCCTCGC
CGGCCGCTTCCGTGGAAAGCGTGTCGTTCTCCTCAAGCACCTCGAGCAGG
GTGTTCTCCTCGTCACCGGTCCCTTCAAGATCAACGGTGTTCCCCTCCGC
CGTGTCAACGCTCGTTACGTGATCGCCACCAGCACCCGTATCGACATCAG
CGGTGTTGACGCCCAGACCATCGAGAAGGTCTCCGCTGCCGACTACTTCA
CCAAGGAGAAGAAGGCTGAGAAGAAGACCGAGGAGGCTTTCTTCAAGCAG
GGAGAGAAGCCCCAGAAGAAGGTTGTTGCCAGCGCCCGCGCTAGCGACCA
GAAGGCCGTTGACCAGTCCATCCTCGCCTCCGTCAAGAAGGAGGCTTTCC
TCGGAAGCTACCTGGCCAGCACCTTCAGCCTCCGCAACGGCGACAAGCCC
CACGAGATGAAGTGGTAGATGTCGGACTCTACTGTTGGCCAGACGAAGCA
GTTTGGAAAGGGCCAGAGGACCGTCCCTCACCCGGCCCAGAAGGCCCAGA
AATGGTACCCCGTTGATGACGAGTCGCAGCCCAAGAAAGTCCGCAAGGCT
ATCCGTCCCGCTAAGGTCCGCGAGAGCCTCCAGCCCGGTACCGTTCTGAT
CCTCCTCGCCGGCCGCTTCCGTGGAAAGCGTGTCGTTCTCCTCAAGCACC
TCGAGCAGGGTGTTCTCCTCGTCACCGGTCCCTTCAAGATCAACGGTGTT
CCCCTCCGCCGTGTCAACGCTCGTTACGTGATCGCCACCAGCACCCGTAT
CGACATCAGCGGTGTTGACGCCCAGACCATCGAGAAGGTCTCCGCTGCCG
ACTACTTCACCAAGGAGAAGAAGGCTGAGAAGAAGACCGAGGAGGCTTTC
TTCAAGCAGGGAGAGAAGCCCCAGAAGAAGGTTGTTGCCAGCGCCCGCGC
TAGCGACCAGAAGGCCGTTGACCAGTCCATCCTCGCCTCCGTCAAGAAGG
AGGCTTTCCTCGGAAGCTACCTGGCCAGCACCTTCAGCCTCCGCAACGGC
GACAAGCCCCACGAGATGAAGTGGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52748ASPNIDRAFT_52748Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52748-T1ASPNIDRAFT_52748-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52748-T1.utr5p1ASPNIDRAFT_52748-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52748-T1.exon1ASPNIDRAFT_52748-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52748-T1.exon2ASPNIDRAFT_52748-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52748-T1.exon3ASPNIDRAFT_52748-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52748-T1.cdsASPNIDRAFT_52748-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52748-T1.utr3p1ASPNIDRAFT_52748-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008991
DBxrefInterPro:IPR041997
DBxrefInterPro:IPR000915
DBxrefInterPro:IPR014722
DBxrefPFAM:PF01159
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:797257..798614 +
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