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ASPNIDRAFT_52754-T1, ASPNIDRAFT_52754-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52754-T1
Unique NameASPNIDRAFT_52754-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000021.1:761189..762276-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52754-T1 ID=ASPNIDRAFT_52754-T1|Name=ASPNIDRAFT_52754-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1088bp|location=Sequence derived from alignment at ACJE01000021.1:761189..762276- (Aspergillus niger ATCC 1015)
ATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCGAGCGG
TACATACCTCACCCATCCGTCCAATTCGTACGTCCAGAAAACCAAATCTA
ACGAAGTAAAACTACAGAGAAGAAAATCCGCGACAAAGCCACCGACTCTC
TCTCACTCTTCCTCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTC
AAACTATGGAAGGGTCTATTCTTCTGTACGCTACATCTCTTCCCCAAATA
TCACACCGCCACAAACACCAACTAATCATGTATTTAACCAGGCTTCTACC
ACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCGCACTCTCAGCTAC
AGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATCGCTTCCTCCGCGC
CTTCTGGATAACCATTGGACGGGACTTCCACTCACTCGACCGTCTCCGTC
TAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGGCGTTGCATTTGAG
GTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCACCACATCCACAAA
CGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCATCAAAGCGGAATA
AGAAGAACAACAAGAACAAGAAACAAACCCAACAAGAAGAATCCACATCA
TCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGAATCCTACAT
CACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTGACCCGGATC
AACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCGCATGGACCG
GACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGAGTTGGAGAA
AGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGAAGAAGAAGG
TCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATTGAGAAGTTG
AAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGCGGAGACGCT
GGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAGGAGAGGAAGGTGGTGG
AGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTGA
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Coding sequence (CDS) from alignment at ACJE01000021.1:761189..762276-

>ASPNIDRAFT_52754-T1 ID=ASPNIDRAFT_52754-T1|Name=ASPNIDRAFT_52754-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2862bp|location=Sequence derived from alignment at ACJE01000021.1:761189..762276- (Aspergillus niger ATCC 1015)
GCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCGCACT
CTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATCGCTT
CCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTCACTCGACC
GTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGGCGTT
GCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCACCAC
ATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCATCAA
AGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAACAAGAAGAA
TCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCCTCGA
ATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAACTTTG
ACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCATGCCG
CATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTGATGA
GTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAACCGA
AGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCCGATT
GAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGGCTGC
GGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAGGAGAGGA
AGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTGAAGA
AGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCGCTCC
AAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTCTATT
CTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGCCTCG
AGCGGCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCGCCCG
CACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTGCATC
GCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTCACTC
GACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACGTGGG
CGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCCAGCA
CCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTACATCA
TCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAACAAGA
AGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCCGCCC
TCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCTGAAC
TTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGCCCAT
GCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGGATTG
ATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGGGCAA
CCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGAGGCC
GATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACTCGGG
CTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAAGGAG
AGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTGATTG
AAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCCTCCG
CTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAGGGTC
TATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATCTCGC
CTCGAGCGGCTTCTACCACTCCGACCGTCCCCTAACGCAACAAGCACTCG
CCCGCACTCTCAGCTACAGCCTGGTCCCGACGCTCCCCCGAAGCACGCTG
CATCGCTTCCTCCGCGCCTTCTGGATAACCATTGGACGGGACTTCCACTC
ACTCGACCGTCTCCGTCTAGACAAGTACCTATTCCTGATCCGTTGCTACG
TGGGCGTTGCATTTGAGGTGTTCCTCAAGCCCCAGCAATCCTCCACCTCC
AGCACCACATCCACAAACGGCGGCAAGCGCAAAAGAGAAGAAGAGCCTAC
ATCATCAAAGCGGAATAAGAAGAACAACAAGAACAAGAAACAAACCCAAC
AAGAAGAATCCACATCATCAGCAACCACCGCAGAAGAAAAAGACTGGTCC
GCCCTCGAATCCTACATCACCATCATCGAAGAAGGACCCTTGTGCCCTCT
GAACTTTGACCCGGATCAACCGCCCATGAACGAGAAGGAAGATTACGTGC
CCATGCCGCATGGACCGGACGGATTGCGGTACCATGTGATGGATATCTGG
ATTGATGAGTTGGAGAAAGTATTGGAGTTCGAGGAGGGAGAGGAAGAGGG
GCAACCGAAGAAGAAGGTCAAGGGCGGAGTGCCGATGGAGCTTTTGTTGA
GGCCGATTGAGAAGTTGAAGGCGGAGAGTGGGTATAAGCCTGTGCGGACT
CGGGCTGCGGAGACGCTGGATGATGAGCGGTTGGTTGAGTGGGGGGTTAA
GGAGAGGAAGGTGGTGGAGGAGAGTAGTGATGAGGAGTGGGATGGGTTTG
ATTGAAGAAGAAAATCCGCGACAAAGCCACCGACTCTCTCTCACTCTTCC
TCCGCTCCAAAACCGACCTCTCCCTCATCGACCTCCTCAAACTATGGAAG
GGTCTATTCTTCTATGTCCGACGTGACCAAGACTCCCTTCGTACGGGATC
TCGCCTCGAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0030688preribosome, small subunit precursor
Vocabulary: Biological Process
TermDefinition
GO:0006364rRNA processing
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52754ASPNIDRAFT_52754Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52754-T1ASPNIDRAFT_52754-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52754-T1.cdsASPNIDRAFT_52754-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52754-T1.exon3ASPNIDRAFT_52754-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52754-T1.exon2ASPNIDRAFT_52754-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52754-T1.exon1ASPNIDRAFT_52754-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG092646C6
DBxrefInterPro:IPR010301
DBxrefPFAM:PF05997
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000021.1supercontigACJE01000021.1:761189..762276 -
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