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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000019.1:1234877..1236324- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_52961-T1 ID=ASPNIDRAFT_52961-T1|Name=ASPNIDRAFT_52961-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1448bp|location=Sequence derived from alignment at ACJE01000019.1:1234877..1236324- (Aspergillus niger ATCC 1015)
ATGTCTGCCTCTCCGTCTGCGTTGCAATCGACCAAGCGTCCTTTGGAGGA
CCCTTCCTCTCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAGCGTCCTG
CGTTGGACAAAGTAGTAAAGGGTGATGAGTCCGAGGCGTATGCCGATGTG
AAAACGGATGCGCCGGCTGCGACTGCTGATGGCCAGGGCGACACCGTGGT
CCCCGATGCTCCCAACTCCAAGGGCGCTCAGGAGACACAACCCATTCAGT
CGACGGCCTCTCACGCCGAGTCGACCGGTGCCCAATCCGAGCAACATCGT
CCCCAGGATGAGTCTAGCTGGATTCACATTCGGGCTGTAATCTCCAGCCA
GGAGGCTGCCACCGTCATCGGTAAAGGTGGGGAGAACGTATCCCAGATCC
GTCGTCTGTCCGGCGCCAAGTGCACCGTCAGCGACTATTCCCGTGGTGCC
GTCGAGCGTATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTGCGAAGGT
GAGTTTGAACACGATACGGTTCGATTTTTCTACTGTCTTTGCTAACCCGG
ATGCTAGGCCTTTGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTG
ATGCCCCTTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATT
CCCCATATTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCG
AGAGATCCAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCC
TTCCCCTGTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCA
GTGCACATCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGAC
AGAACGCTTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCG
GTCCTGCTGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCT
CAGCCCGCTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCA
CCCTCACCCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCC
AGGGCCCGGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGT
GCTACTCCCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCC
CTACGGTGCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGC
CTGCCGCTCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAG
ATCTACATCCCCAACGACATGGTTGGCGCTATCATTGGAAAGGGAGGAGC
CAAGATCAACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACG
AGCCCCAGGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAG
GAGTGCAATCAGATGGCGCTCTACATGCTCTACTCGAGACTTGGTTAG back to topCoding sequence (CDS) from alignment at ACJE01000019.1:1234877..1236324- >ASPNIDRAFT_52961-T1 ID=ASPNIDRAFT_52961-T1|Name=ASPNIDRAFT_52961-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2778bp|location=Sequence derived from alignment at ACJE01000019.1:1234877..1236324- (Aspergillus niger ATCC 1015)
GCCTTTGGTCTTATTATTCGTACCTTGAACAATGAGCCCCTTGATGCCCC
TTCTACTGCCCAATCCAAGACATACCCCTTGCGTTTGTTGATTCCCCATA
TTCTCATTGGCTCGATCATTGGCAAGGGTGGGAGCCGTATTCGAGAGATC
CAGGACGCCTCTGGTGCACGTCTCAACGCTTCTGATGCTTGCCTTCCCCT
GTCTACTGAACGGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGTGCACA
TCGCTACCTACTACGTTGCCGTGACTCTCGTCGAGCAGCTGACAGAACGC
TTCGGCGGCCCCGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGTCCTGC
TGGCGCTGTGCCTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCAGCCCG
CTGGTGGGCAGTACGGCCATCCCGACACCTTCAAGCGTCACCACCCTCAC
CCCAACCGCGGCGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAGGGCCC
GGCAGCGCAAACTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGCTACTC
CCCACACCCCGTATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCTACGGT
GCGCCTCAGGCGGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCTGCCGC
TCCCGTCGGCGGTGTCATGCCCGGCCAGCCACTGACCCAGCAGATCTACA
TCCCCAACGACATGGTTGGCGCTATCATTGGAAAGGGAGGAGCCAAGATC
AACGAGATCCGTCACCTGAGTGGCAGTGTCATCAAGATCAACGAGCCCCA
GGAGAACAGCAACGAGCGTCTGGTCACGATCACCGGTACCCAGGAGTGCA
ATCAGATGGCGCTCTACATGCTCTACTCGAGACTTGGTTAGATGTCTGCC
TCTCCGTCTGCGTTGCAATCGACCAAGCGTCCTTTGGAGGACCCTTCCTC
TCCCTCCGGTCCTAATGATCAGCCGGAAGCCAAGCGTCCTGCGTTGGACA
AAGTAGTAAAGGGTGATGAGTCCGAGGCGTATGCCGATGTGAAAACGGAT
GCGCCGGCTGCGACTGCTGATGGCCAGGGCGACACCGTGGTCCCCGATGC
TCCCAACTCCAAGGGCGCTCAGGAGACACAACCCATTCAGTCGACGGCCT
CTCACGCCGAGTCGACCGGTGCCCAATCCGAGCAACATCGTCCCCAGGAT
GAGTCTAGCTGGATTCACATTCGGGCTGTAATCTCCAGCCAGGAGGCTGC
CACCGTCATCGGTAAAGGTGGGGAGAACGTATCCCAGATCCGTCGTCTGT
CCGGCGCCAAGTGCACCGTCAGCGACTATTCCCGTGGTGCCGTCGAGCGT
ATCTTGACCGTTAGCGGCCCCCAGGATGCTGCTGCGAAGGCCTTTGGTCT
TATTATTCGTACCTTGAACAATGAGCCCCTTGATGCCCCTTCTACTGCCC
AATCCAAGACATACCCCTTGCGTTTGTTGATTCCCCATATTCTCATTGGC
TCGATCATTGGCAAGGGTGGGAGCCGTATTCGAGAGATCCAGGACGCCTC
TGGTGCACGTCTCAACGCTTCTGATGCTTGCCTTCCCCTGTCTACTGAAC
GGTCCCTTGTTATTCTCGGTGTTGCTGACGCAGTGCACATCGCTACCTAC
TACGTTGCCGTGACTCTCGTCGAGCAGCTGACAGAACGCTTCGGCGGCCC
CGCTGCCTCGGCCTATGCCACCCGCAGCGGCGGTCCTGCTGGCGCTGTGC
CTGGCGGCATGCAGGTTGTGCCGTACGTGCCTCAGCCCGCTGGTGGGCAG
TACGGCCATCCCGACACCTTCAAGCGTCACCACCCTCACCCCAACCGCGG
CGCAGCTGGCGGCTATGGCGTTCCTTACCTCCAGGGCCCGGCAGCGCAAA
CTCCTGTAGCCCAGCCCTCGATGCCCTACGGTGCTACTCCCCACACCCCG
TATGCTGGCGCTGGCCCGCACCAGCCCGCGCCCTACGGTGCGCCTCAGGC
GGCCGCCGCACAGGCTCGTGGTGGGCCGACGCCTGCCGCTCCCGTCGGCG
GTGTCATGCCCGGCCAGCCACTGACCCAGCAGATCTACATCCCCAACGAC
ATGGTTGGCGCTATCATTGGAAAGGGAGGAGCCAAGATCAACGAGATCCG
TCACCTGAGTGGCAGTGTCATCAAGATCAACGAGCCCCAGGAGAACAGCA
ACGAGCGTCTGGTCACGATCACCGGTACCCAGGAGTGCAATCAGATGGCG
CTCTACATGCTCTACTCGAGACTTGGTTAGATGTCTGCCTCTCCGTCTGC
GTTGCAATCGACCAAGCGTCCTTTGGAGGACCCTTCCTCTCCCTCCGGTC
CTAATGATCAGCCGGAAGCCAAGCGTCCTGCGTTGGACAAAGTAGTAAAG
GGTGATGAGTCCGAGGCGTATGCCGATGTGAAAACGGATGCGCCGGCTGC
GACTGCTGATGGCCAGGGCGACACCGTGGTCCCCGATGCTCCCAACTCCA
AGGGCGCTCAGGAGACACAACCCATTCAGTCGACGGCCTCTCACGCCGAG
TCGACCGGTGCCCAATCCGAGCAACATCGTCCCCAGGATGAGTCTAGCTG
GATTCACATTCGGGCTGTAATCTCCAGCCAGGAGGCTGCCACCGTCATCG
GTAAAGGTGGGGAGAACGTATCCCAGATCCGTCGTCTGTCCGGCGCCAAG
TGCACCGTCAGCGACTATTCCCGTGGTGCCGTCGAGCGTATCTTGACCGT
TAGCGGCCCCCAGGATGCTGCTGCGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003723 | RNA binding |
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004088 |
| DBxref | InterPro:IPR036612 |
| DBxref | InterPro:IPR004087 |
| DBxref | PFAM:PF00013 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000019.1 | supercontig | ACJE01000019.1:1234877..1236324 - |
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