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ASPNIDRAFT_52962-T1, ASPNIDRAFT_52962-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_52962-T1
Unique NameASPNIDRAFT_52962-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1250315..1252191-

Legend: exonfive_prime_UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_52962-T1 ID=ASPNIDRAFT_52962-T1|Name=ASPNIDRAFT_52962-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1877bp|location=Sequence derived from alignment at ACJE01000019.1:1250315..1252191- (Aspergillus niger ATCC 1015)
GCTTCGGAGATAACCGCACCTATCATTCGCTCCCTGCACAACCTACTCCC
TTAGTTGCCCCATAACGCTTTTCTAATTGACTGGCACTGTCAGACCCAGT
CTCGGAAATCCTCGCAGCAGACCGACGGCCCTCCTCCATACAGCAAGTCC
AGCCGGTACTGTATTCTGAGTCACGCTCATCAACCCGAATACCTGCAACC
ACTACAGGAATTACTATAAGATCTTCAACGAGACAACGTTCTTACTAGTA
TAAGACTGGAGCTGGATATTGTGCAAGCAATCAGACAAACAAGTCCGTCA
CTTCTATCTTTGTTGTATACCAAATTCAGTCATTGACTGACTCTAAGGCG
ACACCTCACGCAATGGACCTAAGAGATATCAAGAAGACCTCCCAAGAGCA
GGGCCAATTACATCAGAAGCTATGGGAGCTTAACCAGACATACACCCCCG
GAAACGTGTTGCCTAGTGCCAGTAACTTGTCAAGAGCCAGAGCATCTCTA
CCTAAGGCTCTCCCTGCCGAAGGAGCAGGATTCGAAAGTGCCACCCACCA
TATCCTGAATGACTTGGTCCCAGCCTTCAATCGCAGCAGCATAAGTCCCA
ACTATTACGGATTTGTCACTGGAGGCGTTACCCCGGTCGCCCTATTTGCA
GACAATCTCGTCACAGCTTATGATCAGAATGTTCAAGTGCACCTTGCGGA
TCATTCTATATCGACAGACGTCGAAGCTACGGCTCTGAGTCTTCTTGCAG
ATCTTTTGGAACTGGATCGGCACCGCTGGAGCAATGGAACGTTTACTACT
GGGGCCACAGCCAGCAATGTTCATGGATTGGCTTGCGGGAGGGAGTTTGT
CCTTCGAGCTGCTGCCAAAAAGAGGGGAATTTCTATTGAAAGCGTCGGTG
AGGATGGCTTGTTCGAACTAATCCAAGCCACAGGCCTCTCTGGTATCCAA
ATTCTCTCGACGATGCCTCACTCTTCGTTGGCAAAGGCGGCCGGAATCCT
CGGCATTGGCCGTGCCAACGTCAAGAGCATTTGTCGGGACAATCACTACC
TCAGAGTCGACTTGGTACGACTTGAAGCGGAACTGAAAACCAATAAGGCG
AGCATCGTCGCTGTCTCCTGTGGAGAGGTCAATACTGGACACTTTGCGAC
ATCAAGCTTGGCTGAAATGGAAAGCCTACGTAGCCTCTGCGATAAGTACG
GAGCTTGGCTTCACGTCGATGGTGCCTTTGGGATTTTTGGCCGGATCCTC
AAAGATGCTGAATTCTCTGCTATATCAAAGGGGTGCGAAGGCATGGAGCT
AGCAGATTCAATCGCAGGTGACGCTCACAAATTTCTAAACGTGCCATACG
ATTGTGGCTTTGTCCTTTGTCGCCATCCCAGTGAGGCTGAGAAGGTTTTC
CAAAACGCGAATGCGGCTTACTTGTCTGGGGGGCAGTCTGGAGCCGCCTC
AATACCTTCTCCACTAAACATCGGTATGGAGAATTCGAGACGGTTCAGAG
CGTTGCCGGTGTACGCCTCCCTCGTGGCATATGGCCAAGTTGGGTATCAG
AAAATGCTACAGAAGCAAGTTCGGCTTAGTCGAATGATTGCAGGGTGGAT
TTACGATCATCCCAAGTACAATGCTTTGCCAGAGTTGGCAAACAAGGATG
AGTTGCTAAACCAGACCTACATCATAGTGCTCTTCAGTGCAAAGGATGAC
GAGCTGAACAACAGCCTCACCAAGGAGATTAATGCGACTTCTAAGCTTTT
TGTGTCTGGAACCTCTTGGCAAGGAAGACCGGCTTGCCGGATCGCAATTT
CAAACTGGAGGGTGGAAGAAGAAAGGGATTTTGCACTTGTGACAGATGTC
CTGGACAATGTAGCTGGAAAACTATAG
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Coding sequence (CDS) from alignment at ACJE01000019.1:1250315..1252191-

>ASPNIDRAFT_52962-T1 ID=ASPNIDRAFT_52962-T1|Name=ASPNIDRAFT_52962-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1515bp|location=Sequence derived from alignment at ACJE01000019.1:1250315..1252191- (Aspergillus niger ATCC 1015)
ATGGACCTAAGAGATATCAAGAAGACCTCCCAAGAGCAGGGCCAATTACA
TCAGAAGCTATGGGAGCTTAACCAGACATACACCCCCGGAAACGTGTTGC
CTAGTGCCAGTAACTTGTCAAGAGCCAGAGCATCTCTACCTAAGGCTCTC
CCTGCCGAAGGAGCAGGATTCGAAAGTGCCACCCACCATATCCTGAATGA
CTTGGTCCCAGCCTTCAATCGCAGCAGCATAAGTCCCAACTATTACGGAT
TTGTCACTGGAGGCGTTACCCCGGTCGCCCTATTTGCAGACAATCTCGTC
ACAGCTTATGATCAGAATGTTCAAGTGCACCTTGCGGATCATTCTATATC
GACAGACGTCGAAGCTACGGCTCTGAGTCTTCTTGCAGATCTTTTGGAAC
TGGATCGGCACCGCTGGAGCAATGGAACGTTTACTACTGGGGCCACAGCC
AGCAATGTTCATGGATTGGCTTGCGGGAGGGAGTTTGTCCTTCGAGCTGC
TGCCAAAAAGAGGGGAATTTCTATTGAAAGCGTCGGTGAGGATGGCTTGT
TCGAACTAATCCAAGCCACAGGCCTCTCTGGTATCCAAATTCTCTCGACG
ATGCCTCACTCTTCGTTGGCAAAGGCGGCCGGAATCCTCGGCATTGGCCG
TGCCAACGTCAAGAGCATTTGTCGGGACAATCACTACCTCAGAGTCGACT
TGGTACGACTTGAAGCGGAACTGAAAACCAATAAGGCGAGCATCGTCGCT
GTCTCCTGTGGAGAGGTCAATACTGGACACTTTGCGACATCAAGCTTGGC
TGAAATGGAAAGCCTACGTAGCCTCTGCGATAAGTACGGAGCTTGGCTTC
ACGTCGATGGTGCCTTTGGGATTTTTGGCCGGATCCTCAAAGATGCTGAA
TTCTCTGCTATATCAAAGGGGTGCGAAGGCATGGAGCTAGCAGATTCAAT
CGCAGGTGACGCTCACAAATTTCTAAACGTGCCATACGATTGTGGCTTTG
TCCTTTGTCGCCATCCCAGTGAGGCTGAGAAGGTTTTCCAAAACGCGAAT
GCGGCTTACTTGTCTGGGGGGCAGTCTGGAGCCGCCTCAATACCTTCTCC
ACTAAACATCGGTATGGAGAATTCGAGACGGTTCAGAGCGTTGCCGGTGT
ACGCCTCCCTCGTGGCATATGGCCAAGTTGGGTATCAGAAAATGCTACAG
AAGCAAGTTCGGCTTAGTCGAATGATTGCAGGGTGGATTTACGATCATCC
CAAGTACAATGCTTTGCCAGAGTTGGCAAACAAGGATGAGTTGCTAAACC
AGACCTACATCATAGTGCTCTTCAGTGCAAAGGATGACGAGCTGAACAAC
AGCCTCACCAAGGAGATTAATGCGACTTCTAAGCTTTTTGTGTCTGGAAC
CTCTTGGCAAGGAAGACCGGCTTGCCGGATCGCAATTTCAAACTGGAGGG
TGGAAGAAGAAAGGGATTTTGCACTTGTGACAGATGTCCTGGACAATGTA
GCTGGAAAACTATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0019752carboxylic acid metabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0030170pyridoxal phosphate binding
GO:0016831carboxy-lyase activity
GO:0003824catalytic activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52962ASPNIDRAFT_52962Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52962-T1.cdsASPNIDRAFT_52962-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52962-T1.exon2ASPNIDRAFT_52962-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_52962-T1.exon1ASPNIDRAFT_52962-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52962-T1.utr5p1ASPNIDRAFT_52962-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_52962-T1ASPNIDRAFT_52962-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR015424
DBxrefInterPro:IPR002129
DBxrefInterPro:IPR015421
DBxrefPFAM:PF00282
Productpyridoxal-dependent decarboxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1250315..1252191 -
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