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ASPNIDRAFT_53002-T1, ASPNIDRAFT_53002-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53002-T1
Unique NameASPNIDRAFT_53002-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:1706437..1707531-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53002-T1 ID=ASPNIDRAFT_53002-T1|Name=ASPNIDRAFT_53002-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1095bp|location=Sequence derived from alignment at ACJE01000019.1:1706437..1707531- (Aspergillus niger ATCC 1015)
CTCCCTCTAACATCATCCCATCATGGCGGCGGAACAAAGAAAGCTGCTTG
AGCAGCTCATGGGAGGTAAATTCTCCAAGCCCAGCTTCTACCAAGCTCTA
AACAGCTAACCCAATTCTTTTTCTCCAGCGGACCAGCTCATAGGTACCGG
CGCTCCCTCTCGCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTC
GCTCGTATCTCGTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAG
CAAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGA
GTATGAGACCGCCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACG
ACTATATGCGCGACATGCAGAAATACATCGATGATTGTGACCGACGTATC
GATACCGCTCAGCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGAC
CAACAACTTGGTAAGGCATATACTCCAGCCCAACCACAGGACACCCCAAG
TGGCCAAAAGAAGACTGGACTGATCATATTCTCAATAATATAGCTGAAGC
AAATCTCCGACCTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCG
GTGCTGGGCGAAACCGGCTCCGTCGCACAGGCCCTGAACGAACTTCACAA
GATCCGCACAGCCAAGCACCAAAAGGAAACGTGTGAGCGAGAACTGAAGA
ATCTTCAAGATACCTCCGGACCTTCGGGTCATCAGAAGCTGCAAGTGTGC
GATGTCTGCGGCGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGC
GGACCATTTCTTCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGG
GGTATAAGAAGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGT
CATCACGATGATGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACG
TGGTCCTCGGTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGT
AAAACATTGATGAGCGTCTTGTCTTTTCTTGGAGTTTATTCTGCAATGCT
GTTGTAATTTGTCTGGATTTGCATAGCGCAGGCGTTTTCGTTACT
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Coding sequence (CDS) from alignment at ACJE01000019.1:1706437..1707531-

>ASPNIDRAFT_53002-T1 ID=ASPNIDRAFT_53002-T1|Name=ASPNIDRAFT_53002-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2502bp|location=Sequence derived from alignment at ACJE01000019.1:1706437..1707531- (Aspergillus niger ATCC 1015)
CTGAAGCAAATCTCCGACCTGACCAAAACCATCAACACGGGTCTCCTCGA
GATCTCGGTGCTGGGCGAAACCGGCTCCGTCGCACAGGCCCTGAACGAAC
TTCACAAGATCCGCACAGCCAAGCACCAAAAGGAAACGTGTGAGCGAGAA
CTGAAGAATCTTCAAGATACCTCCGGACCTTCGGGTCATCAGAAGCTGCA
AGTGTGCGATGTCTGCGGCGCGTACCTGAGTCGTCTCGATAACGATCGTC
GGTTGGCGGACCATTTCTTCGGAAAGATGCACATGGGATACTCGGACATG
CGCAAGGGGTATAAGAAGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCC
GGTTCGTCATCACGATGATGATGATGGTGGTTGGGGTGGACGCTCCGGTG
GTGGACGTGGTCCTCGGTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCT
CGCTGGTAACGGACCAGCTCATAGGTACCGGCGCTCCCTCTCGCAATGCG
CAGCTCCAAATCACCGATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCAC
TTGTCCGCATGACCTCTTCACCAATACCAAGCAAGACCTGGGCCCTTGTC
AGAAAGTTCACAGCGAAGGATTGAAGACGGAGTATGAGACCGCCTCGGCA
GCTGAGAAGGCCAAATGGGGATTCGATTACGACTATATGCGCGACATGCA
GAAATACATCGATGATTGTGACCGACGTATCGATACCGCTCAGCGACGCT
TGGAAAAGACTCCGGACGAGATCAGGCAGACCAACAACTTGATGGCGGCG
GAACAAAGAAAGCTGCTTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCG
ACCTGACCAAAACCATCAACACGGGTCTCCTCGAGATCTCGGTGCTGGGC
GAAACCGGCTCCGTCGCACAGGCCCTGAACGAACTTCACAAGATCCGCAC
AGCCAAGCACCAAAAGGAAACGTGTGAGCGAGAACTGAAGAATCTTCAAG
ATACCTCCGGACCTTCGGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGC
GGCGCGTACCTGAGTCGTCTCGATAACGATCGTCGGTTGGCGGACCATTT
CTTCGGAAAGATGCACATGGGATACTCGGACATGCGCAAGGGGTATAAGA
AGCTCAGCGAGGAGCTTAAGGGACGGCCTCCGCCGGTTCGTCATCACGAT
GATGATGATGGTGGTTGGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCG
GTATGGCGGTGGTGGTTACAAGAAGCGCGGTCCTCGCTGGTAACGGACCA
GCTCATAGGTACCGGCGCTCCCTCTCGCAATGCGCAGCTCCAAATCACCG
ATCCAAAAGTCTGTCGCTCGTATCTCGTCGGCACTTGTCCGCATGACCTC
TTCACCAATACCAAGCAAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGA
AGGATTGAAGACGGAGTATGAGACCGCCTCGGCAGCTGAGAAGGCCAAAT
GGGGATTCGATTACGACTATATGCGCGACATGCAGAAATACATCGATGAT
TGTGACCGACGTATCGATACCGCTCAGCGACGCTTGGAAAAGACTCCGGA
CGAGATCAGGCAGACCAACAACTTGATGGCGGCGGAACAAAGAAAGCTGC
TTGAGCAGCTCATGGGAGCTGAAGCAAATCTCCGACCTGACCAAAACCAT
CAACACGGGTCTCCTCGAGATCTCGGTGCTGGGCGAAACCGGCTCCGTCG
CACAGGCCCTGAACGAACTTCACAAGATCCGCACAGCCAAGCACCAAAAG
GAAACGTGTGAGCGAGAACTGAAGAATCTTCAAGATACCTCCGGACCTTC
GGGTCATCAGAAGCTGCAAGTGTGCGATGTCTGCGGCGCGTACCTGAGTC
GTCTCGATAACGATCGTCGGTTGGCGGACCATTTCTTCGGAAAGATGCAC
ATGGGATACTCGGACATGCGCAAGGGGTATAAGAAGCTCAGCGAGGAGCT
TAAGGGACGGCCTCCGCCGGTTCGTCATCACGATGATGATGATGGTGGTT
GGGGTGGACGCTCCGGTGGTGGACGTGGTCCTCGGTATGGCGGTGGTGGT
TACAAGAAGCGCGGTCCTCGCTGGTAACGGACCAGCTCATAGGTACCGGC
GCTCCCTCTCGCAATGCGCAGCTCCAAATCACCGATCCAAAAGTCTGTCG
CTCGTATCTCGTCGGCACTTGTCCGCATGACCTCTTCACCAATACCAAGC
AAGACCTGGGCCCTTGTCAGAAAGTTCACAGCGAAGGATTGAAGACGGAG
TATGAGACCGCCTCGGCAGCTGAGAAGGCCAAATGGGGATTCGATTACGA
CTATATGCGCGACATGCAGAAATACATCGATGATTGTGACCGACGTATCG
ATACCGCTCAGCGACGCTTGGAAAAGACTCCGGACGAGATCAGGCAGACC
AACAACTTGATGGCGGCGGAACAAAGAAAGCTGCTTGAGCAGCTCATGGG
AG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005685U1 snRNP
Vocabulary: Biological Process
TermDefinition
GO:0006376mRNA splice site selection
Vocabulary: Molecular Function
TermDefinition
GO:0003729mRNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53002ASPNIDRAFT_53002Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53002-T1ASPNIDRAFT_53002-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53002-T1.cdsASPNIDRAFT_53002-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53002-T1.utr3p1ASPNIDRAFT_53002-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53002-T1.exon3ASPNIDRAFT_53002-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53002-T1.exon2ASPNIDRAFT_53002-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53002-T1.exon1ASPNIDRAFT_53002-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53002-T1.utr5p1ASPNIDRAFT_53002-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
NoteEggNog:ENOG41
NoteBUSCO:EOG09264D7Y
DBxrefInterPro:IPR004882
DBxrefPFAM:PF03194
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:1706437..1707531 -
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