You are here

Home

ASPNIDRAFT_53037-T1, ASPNIDRAFT_53037-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53037-T1
Unique NameASPNIDRAFT_53037-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000019.1:2289064..2290219-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53037-T1 ID=ASPNIDRAFT_53037-T1|Name=ASPNIDRAFT_53037-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1156bp|location=Sequence derived from alignment at ACJE01000019.1:2289064..2290219- (Aspergillus niger ATCC 1015)
ATGTCTGCTGTCAACGAGAACAACCTGGAGGGCGTGAGTGAGACTGTCCT
CACCCTCCGCAAGGTTGTTGTCAATGAATCCGAGCCCCTCGCGCGCCGCT
TCCGGGCCCTCTTTTCTCTCAAGTACCTGGCGTGCCTGCAGCCTCCGTCC
GAGGACACCCTTCCCGCTATTGAGGCCATCGCTGCCGCTTTCTCATCCAA
GTCGGCTTTGTTGAAGCATGAGCTTGCCTACTGTCTTGGTCAGACTCGCA
ACCCTGACGCTGTCGCGTTCCTTCAGCAGGTTCTGAAGGATAAGGAGGAG
GATGTTATGTGCCGTCATGAGGCCGCTGAGGCCCTAGGTGCTCTGGGCTA
CGAGGACAGTCTGGAGATTCTCAAGGCACTGAAGGATGATGAGAATGAGC
CCGAGGTCATTCGGGAGACTTGCGACATCGCCGTGGATCGTATCGTGTGG
GAGAACTCCGAAGCCAGGAAGGCTGAGAAGTTGAAGCCTAGGTATGACCT
TACTTTTCTTGTCGCAGCCAAGTCATTCGGATTGCATGCTAATTGAGTGC
TTCTATATGATATAGTGACTTCACCTCCATCGACCCCGCCCCACCAATGC
CCCTGGAAGCCGCAGAACCCTCTATTCCTGAGCTCGAGAAGACATTGCTG
GACACCAAGCTTCCTCTCTTCCAAAGATACCGTGCCATGTTTGCCCTGCG
CGACCTCGCCTCGCCTCCTGATCTGCCCACCGCCGTCCAGGCCGTCGATG
CGCTCGCCAAGGGTCTCAAGGACCCCTCTGCGCTGTTCCGCCACGAGGTC
GCCTTCGTTTTCGGTCAACTTTGCCACCCCGCATCCGTCCCTAGTCTCAC
CGAGTGTCTGAGCAACCAAGAAGAAGCTGGTATGGTGCGCCACGAAGCTG
CCGAGGCCCTCGGTAGCTTGGGTGACGTTGAGGGTGTCGAGGATACCCTG
AAGAAGTTCTTGAACGACCCCGAGCAGGTTGTCCGGGACAGCATTATCGT
GGCTCTTGATATGGCCGAGTTTGAGAAGAACGGAGAGATGGAGTATGCGC
TGGTGCCGGACTCTGGTGCCCCTGCTGCCGTGTCTGCTTGATGAATTATG
CGAACAAAAAGTCTACAATGCCGGTAAATAGTTGCTTTCATGACTCATAG
ATGTAC
back to top

Coding sequence (CDS) from alignment at ACJE01000019.1:2289064..2290219-

>ASPNIDRAFT_53037-T1 ID=ASPNIDRAFT_53037-T1|Name=ASPNIDRAFT_53037-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2034bp|location=Sequence derived from alignment at ACJE01000019.1:2289064..2290219- (Aspergillus niger ATCC 1015)
TGACTTCACCTCCATCGACCCCGCCCCACCAATGCCCCTGGAAGCCGCAG
AACCCTCTATTCCTGAGCTCGAGAAGACATTGCTGGACACCAAGCTTCCT
CTCTTCCAAAGATACCGTGCCATGTTTGCCCTGCGCGACCTCGCCTCGCC
TCCTGATCTGCCCACCGCCGTCCAGGCCGTCGATGCGCTCGCCAAGGGTC
TCAAGGACCCCTCTGCGCTGTTCCGCCACGAGGTCGCCTTCGTTTTCGGT
CAACTTTGCCACCCCGCATCCGTCCCTAGTCTCACCGAGTGTCTGAGCAA
CCAAGAAGAAGCTGGTATGGTGCGCCACGAAGCTGCCGAGGCCCTCGGTA
GCTTGGGTGACGTTGAGGGTGTCGAGGATACCCTGAAGAAGTTCTTGAAC
GACCCCGAGCAGGTTGTCCGGGACAGCATTATCGTGGCTCTTGATATGGC
CGAGTTTGAGAAGAACGGAGAGATGGAGTATGCGCTGGTGCCGGACTCTG
GTGCCCCTGCTGCCGTGTCTGCTTGAATGTCTGCTGTCAACGAGAACAAC
CTGGAGGGCGTGAGTGAGACTGTCCTCACCCTCCGCAAGGTTGTTGTCAA
TGAATCCGAGCCCCTCGCGCGCCGCTTCCGGGCCCTCTTTTCTCTCAAGT
ACCTGGCGTGCCTGCAGCCTCCGTCCGAGGACACCCTTCCCGCTATTGAG
GCCATCGCTGCCGCTTTCTCATCCAAGTCGGCTTTGTTGAAGCATGAGCT
TGCCTACTGTCTTGGTCAGACTCGCAACCCTGACGCTGTCGCGTTCCTTC
AGCAGGTTCTGAAGGATAAGGAGGAGGATGTTATGTGCCGTCATGAGGCC
GCTGAGGCCCTAGGTGCTCTGGGCTACGAGGACAGTCTGGAGATTCTCAA
GGCACTGAAGGATGATGAGAATGAGCCCGAGGTCATTCGGGAGACTTGCG
ACATCGCCGTGGATCGTATCGTGTGGGAGAACTCCGAAGCCAGGAAGGCT
GAGAAGTTGAAGCCTAGTGACTTCACCTCCATCGACCCCGCCCCACCAAT
GCCCCTGGAAGCCGCAGAACCCTCTATTCCTGAGCTCGAGAAGACATTGC
TGGACACCAAGCTTCCTCTCTTCCAAAGATACCGTGCCATGTTTGCCCTG
CGCGACCTCGCCTCGCCTCCTGATCTGCCCACCGCCGTCCAGGCCGTCGA
TGCGCTCGCCAAGGGTCTCAAGGACCCCTCTGCGCTGTTCCGCCACGAGG
TCGCCTTCGTTTTCGGTCAACTTTGCCACCCCGCATCCGTCCCTAGTCTC
ACCGAGTGTCTGAGCAACCAAGAAGAAGCTGGTATGGTGCGCCACGAAGC
TGCCGAGGCCCTCGGTAGCTTGGGTGACGTTGAGGGTGTCGAGGATACCC
TGAAGAAGTTCTTGAACGACCCCGAGCAGGTTGTCCGGGACAGCATTATC
GTGGCTCTTGATATGGCCGAGTTTGAGAAGAACGGAGAGATGGAGTATGC
GCTGGTGCCGGACTCTGGTGCCCCTGCTGCCGTGTCTGCTTGAATGTCTG
CTGTCAACGAGAACAACCTGGAGGGCGTGAGTGAGACTGTCCTCACCCTC
CGCAAGGTTGTTGTCAATGAATCCGAGCCCCTCGCGCGCCGCTTCCGGGC
CCTCTTTTCTCTCAAGTACCTGGCGTGCCTGCAGCCTCCGTCCGAGGACA
CCCTTCCCGCTATTGAGGCCATCGCTGCCGCTTTCTCATCCAAGTCGGCT
TTGTTGAAGCATGAGCTTGCCTACTGTCTTGGTCAGACTCGCAACCCTGA
CGCTGTCGCGTTCCTTCAGCAGGTTCTGAAGGATAAGGAGGAGGATGTTA
TGTGCCGTCATGAGGCCGCTGAGGCCCTAGGTGCTCTGGGCTACGAGGAC
AGTCTGGAGATTCTCAAGGCACTGAAGGATGATGAGAATGAGCCCGAGGT
CATTCGGGAGACTTGCGACATCGCCGTGGATCGTATCGTGTGGGAGAACT
CCGAAGCCAGGAAGGCTGAGAAGTTGAAGCCTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0019135deoxyhypusine monooxygenase activity
Vocabulary: Biological Process
TermDefinition
GO:0008612peptidyl-lysine modification to peptidyl-hypusine
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LIA1ASPNIDRAFT_53037Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53037-T1ASPNIDRAFT_53037-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53037-T1.cdsASPNIDRAFT_53037-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53037-T1.utr3p1ASPNIDRAFT_53037-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53037-T1.exon2ASPNIDRAFT_53037-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53037-T1.exon1ASPNIDRAFT_53037-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09263JZO
DBxrefInterPro:IPR016024
DBxrefInterPro:IPR027517
DBxrefInterPro:IPR021133
DBxrefInterPro:IPR011989
DBxrefInterPro:IPR004155
DBxrefPFAM:PF03130
DBxrefPFAM:PF13646
Productdeoxyhypusine hydroxylase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000019.1supercontigACJE01000019.1:2289064..2290219 -
Powered by Drupal