You are here

ASPNIDRAFT_53548-T1, ASPNIDRAFT_53548-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53548-T1
Unique NameASPNIDRAFT_53548-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1758538..1759086+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53548-T1 ID=ASPNIDRAFT_53548-T1|Name=ASPNIDRAFT_53548-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=549bp|location=Sequence derived from alignment at ACJE01000013.1:1758538..1759086+ (Aspergillus niger ATCC 1015)
CAGCAGTCTAGCAGCCAATACTTTCTCTTCCACGACAACAATCAAAATGC AATTCACCACCTTCCTTTCCCTGGCCATCGCGGCCGTCGTTCCCGCTCTG GCTGCGGACAACGCTGCTCAGGAGAACATCGAGGTAATACCACCTCTGCA CCAATCCAGCTCGAAGGAACGATGATACTAAGACTGAATAGGGCTCCGTC TACCCCCTCGAGTTCTTCCACGGCCCCCCTACCTTCAACGACGGTGATGC CTCTTGCTTCACTTCGTGAGTTACCACCCCAACCTCCATACACTCCTAAT CAATATCTAATGTCCATCTACAGCGTCACCGGCGAGATCCACTCCGTCAG GCAGGCTCATGGCATTACCTGCCACATCTACTTGTAAGTGCTTAATCTCA GCAGGTTTCTCACTGAAAGGAGTAAATGTCTAACAAAAAATGACAGCGAC CACAACTGCGGCGGTGACAGCATCCCCGTCACGGTCGACATCCCCGATGT CATTCACGACCACCACAAGCCCGCTCTCAGCGCTCGCTGCTACCGGTAG
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:1758538..1759086+

>ASPNIDRAFT_53548-T1 ID=ASPNIDRAFT_53548-T1|Name=ASPNIDRAFT_53548-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1242bp|location=Sequence derived from alignment at ACJE01000013.1:1758538..1759086+ (Aspergillus niger ATCC 1015)
ATGCAATTCACCACCTTCCTTTCCCTGGCCATCGCGGCCGTCGTTCCCGC
TCTGGCTGCGGACAACGCTGCTCAGGAGAACATCGAGCTCGAAGGAACGA
TGATACTAAGACTGAATAGGGCTCCGTCTACCCCCTCGAGTTCTTCCACG
GCCCCCCTACCTTCAACGACGGTGATGCCTCTTGCTTCACTTCGTGAGTT
ACCACCCCAACCTCCATACACTCCTAATCAATATCTAATGTCCATCTACA
GCGTCACCGGCGAGATCCACTCCGTCAGGCAGGCTCATGGCATTACCTGC
CACATCTACTTCGACCACAACTGCGGCGGTGACAGCATCCCCGTCACGGT
CGACATCCCCGATGTCATTCACGACCACCACAAGCCCGCTCTCAGCGCTC
GCTGCTACCGGTAGATGCAATTCACCACCTTCCTTTCCCTGGCCATCGCG
GCCGTCGTTCCCGCTCTGGCTGCGGACAACGCTGCTCAGGAGAACATCGA
GCTCGAAGGAACGATGATACTAAGACTGAATAGGGCTCCGTCTACCCCCT
CGAGTTCTTCCACGGCCCCCCTACCTTCAACGACGGTGATGCCTCTTGCT
TCACTTCGTGAGTTACCACCCCAACCTCCATACACTCCTAATCAATATCT
AATGTCCATCTACAGCGTCACCGGCGAGATCCACTCCGTCAGGCAGGCTC
ATGGCATTACCTGCCACATCTACTTCGACCACAACTGCGGCGGTGACAGC
ATCCCCGTCACGGTCGACATCCCCGATGTCATTCACGACCACCACAAGCC
CGCTCTCAGCGCTCGCTGCTACCGGTAGATGCAATTCACCACCTTCCTTT
CCCTGGCCATCGCGGCCGTCGTTCCCGCTCTGGCTGCGGACAACGCTGCT
CAGGAGAACATCGAGCTCGAAGGAACGATGATACTAAGACTGAATAGGGC
TCCGTCTACCCCCTCGAGTTCTTCCACGGCCCCCCTACCTTCAACGACGG
TGATGCCTCTTGCTTCACTTCGTGAGTTACCACCCCAACCTCCATACACT
CCTAATCAATATCTAATGTCCATCTACAGCGTCACCGGCGAGATCCACTC
CGTCAGGCAGGCTCATGGCATTACCTGCCACATCTACTTCGACCACAACT
GCGGCGGTGACAGCATCCCCGTCACGGTCGACATCCCCGATGTCATTCAC
GACCACCACAAGCCCGCTCTCAGCGCTCGCTGCTACCGGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53548ASPNIDRAFT_53548Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53548-T1.utr5p1ASPNIDRAFT_53548-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53548-T1.exon1ASPNIDRAFT_53548-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53548-T1.exon2ASPNIDRAFT_53548-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53548-T1.exon3ASPNIDRAFT_53548-T1.exon3Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53548-T1.cdsASPNIDRAFT_53548-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53548-T1ASPNIDRAFT_53548-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteSECRETED:SignalP(1-19)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1758538..1759086 +