You are here

Home

ASPNIDRAFT_53555-T1, ASPNIDRAFT_53555-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53555-T1
Unique NameASPNIDRAFT_53555-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1581943..1582836+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53555-T1 ID=ASPNIDRAFT_53555-T1|Name=ASPNIDRAFT_53555-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=894bp|location=Sequence derived from alignment at ACJE01000013.1:1581943..1582836+ (Aspergillus niger ATCC 1015)
CTTCCTTCCTGCCATCCAGACCCCAAGCTGCTAGCTGTCCCTCTCCAAGA
CAACGCCCTCAGTTATGCCTTCCTGGATCGTCAAGCTCGGTGCCCTTGTG
GCTTTGGCGCATACCGTCGCCGGATCCCAGATCTCCCTCAGGACGACCAC
GCCCCCGGCCAATGAGTACGTGACTCACTGCACTGTCATCCTCGATGATG
AGCTTTTTGGCTGCAAGGGCAGTTCGAAGCCCTTCGGAAAGAAGTGTGGC
CATAACAGGGGCATCGAGACCAAGTCTATCTGCGATACATCCTCCGTTAC
CGTTGATTGGTCGACCGCCCAGGTTACCTTCCAGGATAACAATGGCCACT
CGGCTAACTGCACGCTGAGTTCGACTGAGGAGGGAGGTCACTGCAACACT
GACGACCCGGATGAGTTCCCGATTGAGCACAATGGAGCAGAGAGACTCGG
AGCCGGAGCTGCCCTCTGGGGTCTTGGCACCATGGCTGCTACCCTGTTTA
TCTGAACTTCCTGAACTTCCTGAACTTCCTGAACAGGGTAAGTGCTTCCT
GGTTGAAGTTTTAGCAATGTCCAACTAGTACTGGCTACTGAATAGTCGAC
TAACGATTATCTATTTAATCAGGTCTTTCGCCATTTCCGTGATTACACTA
TCCTCATGATCACTGGCCCGGCTACCACACCATCGATATCGTTGAAAGCA
AGTCTATTATGGATGCCGCCATCATATACCCACGATCTCCCGCACTTATC
TCTGAAGGGCAAGAGATAACGCAAGACCGAACTCACAGAGGCATTACTTT
TTAATGCATATTTTTCTTCTTCGCCTCTACCATTATGTATATAGATTTAT
TTCTTAGTCAACAATTAACGAGGAATGAAAAGCCATACATACCT
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:1581943..1582836+

>ASPNIDRAFT_53555-T1 ID=ASPNIDRAFT_53555-T1|Name=ASPNIDRAFT_53555-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=441bp|location=Sequence derived from alignment at ACJE01000013.1:1581943..1582836+ (Aspergillus niger ATCC 1015)
ATGCCTTCCTGGATCGTCAAGCTCGGTGCCCTTGTGGCTTTGGCGCATAC
CGTCGCCGGATCCCAGATCTCCCTCAGGACGACCACGCCCCCGGCCAATG
AGTACGTGACTCACTGCACTGTCATCCTCGATGATGAGCTTTTTGGCTGC
AAGGGCAGTTCGAAGCCCTTCGGAAAGAAGTGTGGCCATAACAGGGGCAT
CGAGACCAAGTCTATCTGCGATACATCCTCCGTTACCGTTGATTGGTCGA
CCGCCCAGGTTACCTTCCAGGATAACAATGGCCACTCGGCTAACTGCACG
CTGAGTTCGACTGAGGAGGGAGGTCACTGCAACACTGACGACCCGGATGA
GTTCCCGATTGAGCACAATGGAGCAGAGAGACTCGGAGCCGGAGCTGCCC
TCTGGGGTCTTGGCACCATGGCTGCTACCCTGTTTATCTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53555ASPNIDRAFT_53555Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53555-T1ASPNIDRAFT_53555-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53555-T1.utr5p1ASPNIDRAFT_53555-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53555-T1.exon1ASPNIDRAFT_53555-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53555-T1.exon2ASPNIDRAFT_53555-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53555-T1.cdsASPNIDRAFT_53555-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53555-T1.utr3p1ASPNIDRAFT_53555-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR
ASPNIDRAFT_53555-T1.utr3p2ASPNIDRAFT_53555-T1.utr3p2Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1581943..1582836 +
Powered by Drupal