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ASPNIDRAFT_53563-T1, ASPNIDRAFT_53563-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53563-T1
Unique NameASPNIDRAFT_53563-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1525132..1526677-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53563-T1 ID=ASPNIDRAFT_53563-T1|Name=ASPNIDRAFT_53563-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1546bp|location=Sequence derived from alignment at ACJE01000013.1:1525132..1526677- (Aspergillus niger ATCC 1015)
ATGGTCAAGATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCCGTAAG
TCGCGCACCTATCCTCTCAAGTTCACCCATGTATTTTGCATACCTGCTCA
CCAAATGACAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCT
GCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTA
CACCGGCCACGGCATGGTACGCACATGACCAACCCTACCTCCACCTTCTC
AGAAACATTCACTAACAATCCTAGACCTTCACCATCGGCCGCGGCAATGA
AATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAG
ACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTC
TCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCT
GGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCC
TGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTT
GTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGA
GGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCA
AGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGT
TGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGT
CGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGG
AAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAG
GGCAACATTCTTATGGTTGATGCCAACCAGGTACCTACCTCCCCACTTCC
ATCCCTACCACCCACAATGCTAACACCTCATGTGAAAAAACAGGTCTGGT
CCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATTCAAGCCT
TGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCCACGCCGC
CATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGCGTCGCCA
CTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCA
GGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAA
TGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCG
TGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCATCTGAGC
ACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGT
GGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAGGATGGAT
ACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAG
AGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAG
GTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTATAG
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Coding sequence (CDS) from alignment at ACJE01000013.1:1525132..1526677-

>ASPNIDRAFT_53563-T1 ID=ASPNIDRAFT_53563-T1|Name=ASPNIDRAFT_53563-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=5436bp|location=Sequence derived from alignment at ACJE01000013.1:1525132..1526677- (Aspergillus niger ATCC 1015)
GTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACTCGCCGAATT
CAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACATCCTCGGCC
ACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGCCCCATCGGC
GTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAAGCAGCTCCT
GCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCCGTGTCGGCG
GTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAGTTCGGCGTG
CCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTACACTCAGCA
TCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGAGTGTGTTGG
AGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCTAGTGTCAAG
GATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGTTGAGATGAA
GGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGGGCAAGAGTT
GGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCCCGGATAGTA
TAGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTCCGCCATCTC
CCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAACTTACCGCCG
ACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAACTGCGCTGG
ATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGCCGTCGTCAA
CGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTGTCTGGCGCA
TTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATTGACTTCCGC
TACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCTCCTCAAGGA
GGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGCAGAGCCAGG
CTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATACAGTGAGGAA
AAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATACAAGCACTT
TAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGAGATTGGCTA
TTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTTATGGTTGAT
GCCAACCAGACCTCCCTCGATAAAACCGGCTCAGATGCCATGAACGCTGC
AGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACTCCGACTACA
CCGGCCACGGCATGATGGTCAAGATCACAAGTTTCACCACGAGGGACGTG
AGGTTTCCCGTCTGGTCCGTCCCCGAAGCCATCACCTGGATGCAACAACT
CGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCCCCGACGACA
TCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACCCCCTACGGC
CCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGTTGTCTTCAA
GCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCGATGCCTGCC
GTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTTGCGCGCAAG
TTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTTGCCTGAGTA
CACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTGGAAAGAAGA
GTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTGCACCCGTCT
AGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGGGTATAGTGT
TGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTGGTGAGGAGG
GCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTGGAGGGGCCC
CGGATAGTATAGACCTTCACCATCGGCCGCGGCAATGAAATCGTCTGCTC
CGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACCTCGACGAAC
TTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCCGACAGCCAA
CTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGCCCTTGGTGC
CGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGAACAAACCTG
TCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTTCGCTGCATT
GACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGCAATTGCCCT
CCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGGAAGCAGAGC
AGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGGCTGGGATAC
AGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGAGCAGGGATA
CAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAGACCGGAGGA
GATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGCAACATTCTT
ATGGTTGATGCCAACCAGACCTCCCTCGATAAAACCGGCTCAGATGCCAT
GAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCTACACTGACT
CCGACTACACCGGCCACGGCATGATGGTCAAGATCACAAGTTTCACCACG
AGGGACGTGAGGTTTCCCGTCTGGTCCGTCCCCGAAGCCATCACCTGGAT
GCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGCCCACCTCCC
CCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTCCAAGACACC
CCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCAGAACCGCGT
TGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCCTGCAAGCCG
ATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATCTTGCTGCTT
GCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGGTGTCGGGTT
GCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGGTGGTCAGTG
GAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAGCACTTCGTG
CACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGATGGAGCCGGG
GTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTTCGTTCCCTG
GTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAGACCATTCTG
GAGGGGCCCCGGATAGTATAGACCTTCACCATCGGCCGCGGCAATGAAAT
CGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCGGCAAAGACC
TCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTACCTCGTCTCC
GACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCATCCACCTGGC
CCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCAAGACCCTGA
ACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAGGAGTTTGTT
CGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACCCGAGGAGGC
AATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACCGTATCAAGG
AAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGTGCGGGTTGG
CTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGAGAGCGTCGA
GCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACGTCGAGGAAG
ACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTATGACAAGGGC
AACATTCTTATGGTTGATGCCAACCAGACCTCCCTCGATAAAACCGGCTC
AGATGCCATGAACGCTGCAGGCGACTACTCCTCCGCCTACTGCATCATCT
ACACTGACTCCGACTACACCGGCCACGGCATGATGGTCAAGATCACAAGT
TTCACCACGAGGGACGTGAGGTTTCCCGTCTGGTCCGTCCCCGAAGCCAT
CACCTGGATGCAACAACTCGCCGAATTCAAGCCTTGGTTCATCGAAGAGC
CCACCTCCCCCGACGACATCCTCGGCCACGCCGCCATCAAGAAGGCCCTC
CAAGACACCCCCTACGGCCCCATCGGCGTCGCCACTGGCGAAATGTGCCA
GAACCGCGTTGTCTTCAAGCAGCTCCTGCAGGCAGGAGCCCTGACCGTCC
TGCAAGCCGATGCCTGCCGTGTCGGCGGTGTCAATGAAGTTCTGGCCATC
TTGCTGCTTGCGCGCAAGTTCGGCGTGCCGATCGTGCCTCACTCCGGTGG
TGTCGGGTTGCCTGAGTACACTCAGCATCTGAGCACGATCGACTACGTGG
TGGTCAGTGGAAAGAAGAGTGTGTTGGAGTATGTGGATCACTTGCACGAG
CACTTCGTGCACCCGTCTAGTGTCAAGGATGGATACTATGTTACTCCGAT
GGAGCCGGGGTATAGTGTTGAGATGAAGGCGGAGAGCATGGATGCGTTTT
CGTTCCCTGGTGAGGAGGGCAAGAGTTGGTGGAGGTCGGAGGAGGCGAAG
ACCATTCTGGAGGGGCCCCGGATAGTATAGACCTTCACCATCGGCCGCGG
CAATGAAATCGTCTGCTCCGCCATCTCCCTCCTCGCTCCCCTCGTGGTCG
GCAAAGACCTCGACGAACTTACCGCCGACTGGGGCAAGACCTGGCGCTAC
CTCGTCTCCGACAGCCAACTGCGCTGGATCGGACCCGAGAAGGGTGTCAT
CCACCTGGCCCTTGGTGCCGTCGTCAACGCTCTCTGGGATCTCTGGGCCA
AGACCCTGAACAAACCTGTCTGGCGCATTGTCGCGGACATGACCCCCGAG
GAGTTTGTTCGCTGCATTGACTTCCGCTACATCACGGACGCCATTACACC
CGAGGAGGCAATTGCCCTCCTCAAGGAGGTCGAGGCCGGCAAGCAGGACC
GTATCAAGGAAGCAGAGCAGAGCCAGGCTGTACCGGCCTATACTACCAGT
GCGGGTTGGCTGGGATACAGTGAGGAAAAGCTGAAAGTCCTTCTCAAGGA
GAGCGTCGAGCAGGGATACAAGCACTTTAAGCTGAAGGTTGGCGGAAACG
TCGAGGAAGACCGGAGGAGATTGGCTATTGCTCGTGAAGCTATTGGTTAT
GACAAGGGCAACATTCTTATGGTTGATGCCAACCAGACCTCCCTCGATAA
AACCGGCTCAGATGCCATGAACGCTGCAGGCGACTACTCCTCCGCCTACT
GCATCATCTACACTGACTCCGACTACACCGGCCACGGCATGATGGTCAAG
ATCACAAGTTTCACCACGAGGGACGTGAGGTTTCCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009063cellular amino acid catabolic process
GO:0016052carbohydrate catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0050023L-fuconate dehydratase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
LGD1ASPNIDRAFT_53563Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53563-T1ASPNIDRAFT_53563-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53563-T1.cdsASPNIDRAFT_53563-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53563-T1.exon4ASPNIDRAFT_53563-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53563-T1.exon3ASPNIDRAFT_53563-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53563-T1.exon2ASPNIDRAFT_53563-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53563-T1.exon1ASPNIDRAFT_53563-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
DBxrefInterPro:IPR018110
DBxrefInterPro:IPR034610
DBxrefInterPro:IPR029017
DBxrefInterPro:IPR029065
DBxrefInterPro:IPR013341
DBxrefInterPro:IPR036849
DBxrefInterPro:IPR013342
DBxrefPFAM:PF02746
DBxrefPFAM:PF13378
ProductL-galactonate dehydratase
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1525132..1526677 -
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