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ASPNIDRAFT_53575-T1, ASPNIDRAFT_53575-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53575-T1
Unique NameASPNIDRAFT_53575-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:1434481..1436029+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53575-T1 ID=ASPNIDRAFT_53575-T1|Name=ASPNIDRAFT_53575-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1549bp|location=Sequence derived from alignment at ACJE01000013.1:1434481..1436029+ (Aspergillus niger ATCC 1015)
GCGACACGACACGACAACCCATCGTCCCTTCGCTTTTCGAGTCCCGTTCG
GAAAGCGACCTTGAGAGGAACACCGCAAAAATGGCTGACGAGCACTACGT
GAGTTTTCCGATAACTAAAGACATGTTGAAGAGGACTAGGAAGAGTTTGA
ACTAACGTTCTTTTGCCTACAGAACGCCGAGGAGGCTGCCGGTACGTTTG
AAATTTTTTTGCCTGAACCACCCTTTCCTGCCCTGGACCCCGGAAACAGA
GACGAATTCGCGTTGTGGGAAACGGTATTTTGGCTGGATATACGATATGA
TATGGACATAATTCGATGATGCGACACTTGGAAATTTTTGAGGAAGGGAT
GGGGGGGCAACGGACCGAATTCTCTGTCGACGTTTCTATTCTTGCTTTTG
CCACACCAACTACGAGAACCACGCAGCAGTGATTGAAGGGAACACAAGGC
GCTGACGTATCCGGGAAACAGAGATCAAGAAGAGAAGACAGTTCCGCAAG
TTCACCTACCGCGGTATTGACCTCGACCAGTACGTTTCACCATGAATATC
TATCATACCCACACTGCACTCCGAACCGACGGCCTCGACTCCGAACGAGC
GATATCAGCAATATGGACATTTCTGGATATTTGCGGAATATCCTCGTGGG
AGTCGACGGCCGAGGGAAGGAAATATGACAATCTATCGAAAAGACCGGCG
GGAAATATGTGGAATGGTATCTGACCTGTTTGTCTGCACAGGCTCCTTGA
CCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTCGTC
GCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAGCTC
CGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGTCAA
GACCCACCTCCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCGTCA
TCGGTATCTACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCCGAG
ATGGTTGGCCACTACCTGGGTGAATTCTCTATCTCCTAGTACGTACCCCT
ATACCCATATCCCCCGCGAGCGAATCCAAATGAATATGGTATGTCTAACA
ACCACACAGCAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCACCC
ACTCTTCCCGTTTCATTCCCCTCAAGTAAAGAAGAAAAGCTTTATTGGAT
GGAGTGTCGTCGTGTGGAGGAGGAACTCGGGCGTACGGAATGTTGCTGGG
AGGATCTCTACGGATAAAGGAAAAAAAGAATCAAAACTGGATGGATACCC
ATATGGCATTTCTTTGGGTTCTCATCTTCTTACCTTGTATGTCCAAGTGC
GGGTCAGCTGTTTGCATCTCAATATAAAGGTCTTGTCGGCAATATGAGAA
CGAAAAAAAGAAAGAAACCAACCGGATCCTTCTAAATCTCACGATCCAAG
CCCCTTTTGTCCTGGATGGAAGGGGGCGCAGAGGCTTTGCTCTTCCTTTT
GTTGGTTAGCTTACGAAGGATGGCAGTCTAATTTAACGATTTCACTTTT
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Coding sequence (CDS) from alignment at ACJE01000013.1:1434481..1436029+

>ASPNIDRAFT_53575-T1 ID=ASPNIDRAFT_53575-T1|Name=ASPNIDRAFT_53575-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2310bp|location=Sequence derived from alignment at ACJE01000013.1:1434481..1436029+ (Aspergillus niger ATCC 1015)
ATGGCTGACGAGCACTACAACGCCGAGGAGGCTGCCGAGATCAAGAAGAG
AAGACAGTTCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAGCTCC
TTGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGT
CGTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAA
GCTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCG
TCAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGC
GTCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCC
CGAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTCCTACAAGCCCG
TCAAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCCGTTTCATT
CCCCTCAAGTAAATGGCTGACGAGCACTACAACGCCGAGGAGGCTGCCGA
GATCAAGAAGAGAAGACAGTTCCGCAAGTTCACCTACCGCGGTATTGACC
TCGACCAGCTCCTTGACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCAC
GCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGG
TCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGA
AGCCCGACCTCGTCAAGACCCACCTCCGTGACATGATCGTTGTCCCCGAG
ATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGAGTTCAACCAGAT
CGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTGAATTCTCTATCT
CCTACAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCT
TCCCGTTTCATTCCCCTCAAGTAAATGGCTGACGAGCACTACAACGCCGA
GGAGGCTGCCGAGATCAAGAAGAGAAGACAGTTCCGCAAGTTCACCTACC
GCGGTATTGACCTCGACCAGCTCCTTGACCTCTCCTCCGAACAGCTCCGT
GATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACCGCGGTCTGAAGCG
CAAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCCAAGCAGGAGGCTC
GCCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCTCCGTGACATGATC
GTTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCTACTCCGGTAAGGA
GTTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGCCACTACCTGGGTG
AATTCTCTATCTCCTACAAGCCCGTCAAGCACGGTCGTCCCGGTATCGGT
GCCACCCACTCTTCCCGTTTCATTCCCCTCAAGTAAATGGCTGACGAGCA
CTACAACGCCGAGGAGGCTGCCGAGATCAAGAAGAGAAGACAGTTCCGCA
AGTTCACCTACCGCGGTATTGACCTCGACCAGCTCCTTGACCTCTCCTCC
GAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTCGTCGCTTCAACCG
CGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAGCTCCGCAAGGCCA
AGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGTCAAGACCCACCTC
CGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCGTCATCGGTATCTA
CTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCCGAGATGGTTGGCC
ACTACCTGGGTGAATTCTCTATCTCCTACAAGCCCGTCAAGCACGGTCGT
CCCGGTATCGGTGCCACCCACTCTTCCCGTTTCATTCCCCTCAAGTAAAT
GGCTGACGAGCACTACAACGCCGAGGAGGCTGCCGAGATCAAGAAGAGAA
GACAGTTCCGCAAGTTCACCTACCGCGGTATTGACCTCGACCAGCTCCTT
GACCTCTCCTCCGAACAGCTCCGTGATGTCGTTCACGCCCGCGCTCGTCG
TCGCTTCAACCGCGGTCTGAAGCGCAAGCCCATGGGTCTCATCAAGAAGC
TCCGCAAGGCCAAGCAGGAGGCTCGCCCCAACGAGAAGCCCGACCTCGTC
AAGACCCACCTCCGTGACATGATCGTTGTCCCCGAGATGATCGGCAGCGT
CATCGGTATCTACTCCGGTAAGGAGTTCAACCAGATCGAAGTCAAGCCCG
AGATGGTTGGCCACTACCTGGGTGAATTCTCTATCTCCTACAAGCCCGTC
AAGCACGGTCGTCCCGGTATCGGTGCCACCCACTCTTCCCGTTTCATTCC
CCTCAAGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015935small ribosomal subunit
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
RPS15ASPNIDRAFT_53575Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53575-T1ASPNIDRAFT_53575-T1-proteinAspergillus niger ATCC 1015polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53575-T1.utr5p1ASPNIDRAFT_53575-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53575-T1.exon1ASPNIDRAFT_53575-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53575-T1.exon2ASPNIDRAFT_53575-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53575-T1.exon3ASPNIDRAFT_53575-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53575-T1.exon4ASPNIDRAFT_53575-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53575-T1.exon5ASPNIDRAFT_53575-T1.exon5Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53575-T1.cdsASPNIDRAFT_53575-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53575-T1.utr3p1ASPNIDRAFT_53575-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG092658SK
DBxrefInterPro:IPR020934
DBxrefInterPro:IPR005713
DBxrefInterPro:IPR023575
DBxrefInterPro:IPR002222
DBxrefPFAM:PF00203
Productribosomal protein S15
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:1434481..1436029 +
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