You are here

Home

ASPNIDRAFT_53687-T1, ASPNIDRAFT_53687-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53687-T1
Unique NameASPNIDRAFT_53687-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:374132..374817-

Legend: CDSpolypeptideexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53687-T1 ID=ASPNIDRAFT_53687-T1|Name=ASPNIDRAFT_53687-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=686bp|location=Sequence derived from alignment at ACJE01000013.1:374132..374817- (Aspergillus niger ATCC 1015)
ATGACCACCACGCTCGAAGTCTGGGGCCGCCGCGACTCCTCCAACGTTCA
GGCGGTGATGTGGTGCATCGCCGAGCTCAACCTCCCCTACCTGCGCCACG
ACATCGGCCAACGCTTCGGCGGCAACAACACGCCTGAGTTCCTCGCCATG
AACCCGAACGGCCGCATCCCTGTCCTCCGCGATGGCGCCAGCGAGCCCTT
ATGGGAAAGCGGCGCCATCAACCGGTACCTGGCATCCGCTTACGGGTCCG
ACGAGTTCTGGCCCCAGGATCCCCGGGCGCGCGCACAGATCGATAAATGG
GCCGAATGGGCCAAGGTCACCTTCACCCCGGCCTTCTCGCTGCGTATCTG
GTGGCAGCTGGTGCGGGTGGCCCCGTCGAAGCGGGATCCGATCGCGATTC
GCGAGGCAGTCGCCGGGCTCGATCCCATTCTGGATATCGCGGAGGCGCAG
CTGACGCGGCAGAAGTTTCTGGCTGGAGATGTGTTTACCCTTGCGGATGT
GCAGTTCGGGCACCTGCTGTTTCGGTACTTTAGTATTGACATTGAGCGGA
AGGAGAGGCCGGGTCTGCAGAGGTATTATGAGGCGCTGAAGGAGAGGCCG
GCGTATCGGGAGCACGTTATGGTTGATTTTGAGGCGCTTCGCGCCGTTGA
TTAATTGGGGAATAATAATACTATATAAGTACTAAA
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:374132..374817-

>ASPNIDRAFT_53687-T1 ID=ASPNIDRAFT_53687-T1|Name=ASPNIDRAFT_53687-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=654bp|location=Sequence derived from alignment at ACJE01000013.1:374132..374817- (Aspergillus niger ATCC 1015)
ATGACCACCACGCTCGAAGTCTGGGGCCGCCGCGACTCCTCCAACGTTCA
GGCGGTGATGTGGTGCATCGCCGAGCTCAACCTCCCCTACCTGCGCCACG
ACATCGGCCAACGCTTCGGCGGCAACAACACGCCTGAGTTCCTCGCCATG
AACCCGAACGGCCGCATCCCTGTCCTCCGCGATGGCGCCAGCGAGCCCTT
ATGGGAAAGCGGCGCCATCAACCGGTACCTGGCATCCGCTTACGGGTCCG
ACGAGTTCTGGCCCCAGGATCCCCGGGCGCGCGCACAGATCGATAAATGG
GCCGAATGGGCCAAGGTCACCTTCACCCCGGCCTTCTCGCTGCGTATCTG
GTGGCAGCTGGTGCGGGTGGCCCCGTCGAAGCGGGATCCGATCGCGATTC
GCGAGGCAGTCGCCGGGCTCGATCCCATTCTGGATATCGCGGAGGCGCAG
CTGACGCGGCAGAAGTTTCTGGCTGGAGATGTGTTTACCCTTGCGGATGT
GCAGTTCGGGCACCTGCTGTTTCGGTACTTTAGTATTGACATTGAGCGGA
AGGAGAGGCCGGGTCTGCAGAGGTATTATGAGGCGCTGAAGGAGAGGCCG
GCGTATCGGGAGCACGTTATGGTTGATTTTGAGGCGCTTCGCGCCGTTGA
TTAA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53687ASPNIDRAFT_53687Aspergillus niger ATCC 1015gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53687-T1.cdsASPNIDRAFT_53687-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53687-T1.utr3p1ASPNIDRAFT_53687-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53687-T1.exon1ASPNIDRAFT_53687-T1.exon1Aspergillus niger ATCC 1015exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53687-T1ASPNIDRAFT_53687-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036282
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR010987
DBxrefInterPro:IPR004045
DBxrefInterPro:IPR004046
DBxrefPFAM:PF13417
DBxrefPFAM:PF13409
DBxrefPFAM:PF02798
DBxrefPFAM:PF13410
DBxrefPFAM:PF00043
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:374132..374817 -
Powered by Drupal