You are here

Home

ASPNIDRAFT_53690-T1, ASPNIDRAFT_53690-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53690-T1
Unique NameASPNIDRAFT_53690-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000013.1:351246..352363-

Legend: polypeptideCDSexonthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53690-T1 ID=ASPNIDRAFT_53690-T1|Name=ASPNIDRAFT_53690-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1118bp|location=Sequence derived from alignment at ACJE01000013.1:351246..352363- (Aspergillus niger ATCC 1015)
ATGCCGGTACTATCCCATTTTCTATCTTCCTCTCCATGAAACTCTCCAGA
CAAATTGACTAATCCCATTCTAGGCATACCACTCCATCTTCCTCGAGGAT
CGGGATGTCCCCGTAATAGGTACGCCGCACTCTCCCCGCCATACACTTAC
CTAGCTACACCCCATACATCGAGAGCTACCTCCACCATACACTCCAGCCC
ACCTCCGTATCAGCAGTCCAACTAATATCCATTGATAGGAAACTTCCCCA
TCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCCCG
CTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCCTA
CGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCC
GTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTACC
TTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCG
GGAGGCTGAGAAGGTATGCTTTGCTTGCCCTTGTCGTGCTGAGTTGTGAG
GGGTTGGTGGTGGCTGTTCGATGTTAGGTGTTGCTTAATGAGGTGAGCGT
GCTAATGGGTACTGTTGCAGGCATTGATCAACGTTGCGCTCGACCACTTC
GCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCC
CCGCGATCGTCAGGATGCGGAGACGTTGAGACAGTACGTTTATTCTTTTT
CGGCCCTCTTCGACTGAGGTCTGTGTTGGAGAGTGCTGATTTGGCTGTAA
TAGGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTA
GATTATACCCCGGTGGTGAAGGGCCTTCGAAGGTATGTATTTCTTTCTTT
CTACCCTGCAATTACAGATGGGAGGCTAATTAGGGTGTAGTGGTGGCTTA
GTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGATGATTGATTG
ATTGATTGATTGATAGATAGATGGATGTGCTTTTGTCTGCTGCCACAACT
CAGCGTATGAACAAACTCGAAACTGGACCTTTAGTTGTTGTCCGTGTCTA
GTCACTTTTACTCTGTGT
back to top

Coding sequence (CDS) from alignment at ACJE01000013.1:351246..352363-

>ASPNIDRAFT_53690-T1 ID=ASPNIDRAFT_53690-T1|Name=ASPNIDRAFT_53690-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3402bp|location=Sequence derived from alignment at ACJE01000013.1:351246..352363- (Aspergillus niger ATCC 1015)
TGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGT
ACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTA
TACCCCGGTGGTGAAGGGCCTTCGAAGGCATTGATCAACGTTGCGCTCGA
CCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTG
AGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGAAACTTCCC
CATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCCC
CGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATCC
TACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTT
CCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGTA
CCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATG
CGGGAGGCTGAGAAGGCATACCACTCCATCTTCCTCGAGGATCGGGATGT
CCCCGTAATAGATGCCGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATG
GGAAAGAGCTTCTAGGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTC
GGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGGCATTG
ATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCCC
TTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACGT
TGAGACAGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCCC
CGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTGC
CCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTTC
CGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATCG
CATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTA
AGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATACCACTCCATCTTC
CTCGAGGATCGGGATGTCCCCGTAATAGATGCCGTGGTGGCTTAGTTTCG
CCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGTACCTTTCGCAAGTTAG
GCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAAG
GGCCTTCGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCCC
GGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCG
TCAGGATGCGGAGACGTTGAGACAGAAACTTCCCCATCCTCCCCCTCCGC
ACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCGC
CGACACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGACG
AGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAATC
AATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCGA
GTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGG
CATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGATGCC
GTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGG
TACCTTTCGCAAGTTAGGCAGGAGATCGCGGTTCGGTTGCATGCTAGATT
ATACCCCGGTGGTGAAGGGCCTTCGAAGGCATTGATCAACGTTGCGCTCG
ACCACTTCGCTATTCCCGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTT
GAGGCGCCCCGCGATCGTCAGGATGCGGAGACGTTGAGACAGAAACTTCC
CCATCCTCCCCCTCCGCACACGCACCCGCGGCCCCGCATACACCCTCCCC
CCGCTCCCGCCCACCGCCGACACCACCGATGTGCCCGCCGACAGCGAATC
CTACGACTGCGTCGACGAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCT
TCCGTAACTTCGAAATCAATGGCCCCGCCGATCGCATGCTCATCTACGGT
ACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTAT
GCGGGAGGCTGAGAAGGCATACCACTCCATCTTCCTCGAGGATCGGGATG
TCCCCGTAATAGATGCCGTGGTGGCTTAGTTTCGCCAAGAGAAAGTTCAT
GGGAAAGAGCTTCTAGGTACCTTTCGCAAGTTAGGCAGGAGATCGCGGTT
CGGTTGCATGCTAGATTATACCCCGGTGGTGAAGGGCCTTCGAAGGCATT
GATCAACGTTGCGCTCGACCACTTCGCTATTCCCGGTGACGTGTCCTTCC
CTTTGAACCAGGCGTTTGAGGCGCCCCGCGATCGTCAGGATGCGGAGACG
TTGAGACAGAAACTTCCCCATCCTCCCCCTCCGCACACGCACCCGCGGCC
CCGCATACACCCTCCCCCCGCTCCCGCCCACCGCCGACACCACCGATGTG
CCCGCCGACAGCGAATCCTACGACTGCGTCGACGAGATCCTCTCCCTCTT
CCGCGCCAATGTCCTCTTCCGTAACTTCGAAATCAATGGCCCCGCCGATC
GCATGCTCATCTACGGTACCTTGTTCATCAGCGAGTGCTTGGGGAAGGTT
AAGCCCGGTATGGCTATGCGGGAGGCTGAGAAGGCATACCACTCCATCTT
CCTCGAGGATCGGGATGTCCCCGTAATAGATGCCGTGGTGGCTTAGTTTC
GCCAAGAGAAAGTTCATGGGAAAGAGCTTCTAGGTACCTTTCGCAAGTTA
GGCAGGAGATCGCGGTTCGGTTGCATGCTAGATTATACCCCGGTGGTGAA
GGGCCTTCGAAGGCATTGATCAACGTTGCGCTCGACCACTTCGCTATTCC
CGGTGACGTGTCCTTCCCTTTGAACCAGGCGTTTGAGGCGCCCCGCGATC
GTCAGGATGCGGAGACGTTGAGACAGAAACTTCCCCATCCTCCCCCTCCG
CACACGCACCCGCGGCCCCGCATACACCCTCCCCCCGCTCCCGCCCACCG
CCGACACCACCGATGTGCCCGCCGACAGCGAATCCTACGACTGCGTCGAC
GAGATCCTCTCCCTCTTCCGCGCCAATGTCCTCTTCCGTAACTTCGAAAT
CAATGGCCCCGCCGATCGCATGCTCATCTACGGTACCTTGTTCATCAGCG
AGTGCTTGGGGAAGGTTAAGCCCGGTATGGCTATGCGGGAGGCTGAGAAG
GCATACCACTCCATCTTCCTCGAGGATCGGGATGTCCCCGTAATAGATGC
CG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005856cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0034314Arp2/3 complex-mediated actin nucleation
GO:0030833regulation of actin filament polymerization
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53690ASPNIDRAFT_53690Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53690-T1ASPNIDRAFT_53690-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53690-T1.cdsASPNIDRAFT_53690-T1.cdsAspergillus niger ATCC 1015CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53690-T1.utr3p1ASPNIDRAFT_53690-T1.utr3p1Aspergillus niger ATCC 1015three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53690-T1.exon6ASPNIDRAFT_53690-T1.exon6Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53690-T1.exon5ASPNIDRAFT_53690-T1.exon5Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53690-T1.exon4ASPNIDRAFT_53690-T1.exon4Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53690-T1.exon3ASPNIDRAFT_53690-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53690-T1.exon2ASPNIDRAFT_53690-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53690-T1.exon1ASPNIDRAFT_53690-T1.exon1Aspergillus niger ATCC 1015exon


Properties
Property NameValue
NoteBUSCO:EOG09264S3E
DBxrefInterPro:IPR036753
DBxrefInterPro:IPR007204
DBxrefPFAM:PF04062
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000013.1supercontigACJE01000013.1:351246..352363 -
Powered by Drupal