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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000013.1:252423..254663+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53697-T1 ID=ASPNIDRAFT_53697-T1|Name=ASPNIDRAFT_53697-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2241bp|location=Sequence derived from alignment at ACJE01000013.1:252423..254663+ (Aspergillus niger ATCC 1015)
GCCACGTAAAGGGCTTGATGATCATCCGTTCCTATTGATATAGTCTGTAT
TCCTACAAACATGGCGGAGGCGTTTGAAGACTCGACCAAGTTAGCAGAGG
ATTGGCTCACGTACAGGACTGATCAGAGCACTCTTGATCCGAATTTGGGC
TTCGTTGAACTATTCTATCAAACCTGCTCGGCTGCTCTGGTCCATCTCTG
GAGATCTCATTTCCGATCAACAATTCGAGGGTCCCACAGAAACACATTGA
AGAAGGATGTTGCCAACATTGATTTATGGGAAGAAAAATTTCCAATTGGG
CACCTTGATACTATTCTGGGACGATCACAGCCCTTGAAGTTAAACGTGAT
CGAGAACCTGAAGGGCATCGGAAACGTCCTAAGGCCATACTTCGCGATTT
ATGACTCGAGCACACACGCAGGAAACGGGCGCGATGTCGCCCAAGATCTT
GGTCAAGAATTAGTGACTCAGCTAGAAAAAGCTGTCATAATTTTGGACGA
AGCTGCATCTGACTCGTCTTCAGATGATGATTCCTCTGACAACTCATCTG
AGAGCAGCGAGAGTGAGTATAATCGTTTTGGGCGGCTCCACTGCTATGTC
AACTGCTTGATGGAGCTGGTTCCAGTGATCGAGAGGAACATTTCGCGCTT
GAAAAAGGAGGAGCAGTCGCAGCACGTGCCACTCCAGAGCGAATTTCGGT
TGTCCCAGGATGCGCAGCCTTTTGCCATGCGCATTCGAGATCGGTCGGAT
CCCTCCCTACTCAATCTTTACTCTTGTAAGCTGACAGATAGGACAGATTC
ATATCTGCTTCAACTCTGCTTGTGGAGCGATTAGCAGAAGCCAACCTGGA
AAGATCTATTCGCGTCAGGGAAAATGAAGTCGACGACGAAGTATTAGATG
CTCTGACTCTATTCAAGCCCTATTCTCAGTTCTGTGATTCCGCCATCGGG
ACATCTCTCGCCCCAACATCACGCTACGCTGCAACTACAGCGTCACATAC
CTCATTCCTGTCAGTGACTGGAGATGAAGGGAAAGGTCGACCTCGAGTAC
CCCCTCTACCAGTAGTAGGTGGTACTTTCCGCTGCTACTACTGTGGTGAT
TATGTATCTATGCCTAACAGAATTTATTGGAAGTAAGTACCTTGGTTCGA
ATTGCTATCACGAGTGGACGCGCAGCTAACTTATCAGGATGCACGTTTAT
TCAGAGTTGGAGTCATACCTGTGCACACATGAAGATTGCAGAGACTCCTT
CAAAACGTTCCGAAGCCGCAAGTCTTGGATGGATCATGAATACATTGCGC
ACTTCAGTCAGTGTCTATGGCGTTGCTGTACATGCAATTACACAGCCTAT
GCCGAGAGAGAGTTCATTGATCATTTGGTAAAAGTTCACAGCCTTGACAT
CGCTGGGAGTCTTTTGAATACAACAGTGTCAAGGGCTGAGGAGAGAGTTT
TGAAGCCCCAATTCAAAGATCATAAGTGCGCACTGTGTTTAGAATCTGGT
TGGAAGTCCAAGAAGGAGTATGCAACACATGTAGGAAGGCACTTGGAAGA
AGTATCTCTCGCATGTCTTCCAATAGAGGAGGAAGGGGTTAGCGACGTTG
ACTCAAATGCTGACAGGTGGACCAATGCGACTAAGGGAAGTGAACACGAA
GCTGAGATCATCGATGAAATATCGGAAGATAATGACGCTCAAGCCGTTTT
AAAGTCGGGCCCGGAGATTTTTGGAGTCAGTCATCCTTCGAAACGTACAC
CATCCAAGGGAAGTAAGTCTCTAAGCCTCGAGAACCTGCCTCCTATCATC
AAGCAGTTCCAGTTCAGGTGCAAAGAGCCCGGCTGCAAGGCGCCTTTCAA
GAGGCAGGAGCACCTGAGGCGCCACATGAAGACCCACTCCAAAGAGAAGC
CTCATGTTTGCTGGGTGCCCGGCTGCCACCGTGCGTTCGGTCGCAGTGAC
AGCCTCAACGCCCACTACACCAAAACCCACAGCAAGCGGGGAGGACGAAA
CCGCTACGTCGCTACCCTAGATGAGAATAGTTCGGACTACAACCCGGAAT
ACCGTGGCCAGCTCACCCCTGACGGCCGCCCTATTTGCGGATCCAAGCTC
GAGGACCCCAACCCCGATTGTGGCAACCTGAGTGTTGAGGGGCATTTACC
AGTTGCTGAGCCAGAAACATATGAGATACCGGTCGGCAAAAATCTTTTGA
ATACAGCAAAACCCCCTGTATCCCCCAAGGGGGGACCATGA back to topCoding sequence (CDS) from alignment at ACJE01000013.1:252423..254663+ >ASPNIDRAFT_53697-T1 ID=ASPNIDRAFT_53697-T1|Name=ASPNIDRAFT_53697-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=7968bp|location=Sequence derived from alignment at ACJE01000013.1:252423..254663+ (Aspergillus niger ATCC 1015)
ATGGCGGAGGCGTTTGAAGACTCGACCAAGTTAGCAGAGGATTGGCTCAC
GTACAGGACTGATCAGAGCACTCTTGATCCGAATTTGGGCTTCGTTGAAC
TATTCTATCAAACCTGCTCGGCTGCTCTGGTCCATCTCTGGAGATCTCAT
TTCCGATCAACAATTCGAGGGTCCCACAGAAACACATTGAAGAAGGATGT
TGCCAACATTGATTTATGGGAAGAAAAATTTCCAATTGGGCACCTTGATA
CTATTCTGGGACGATCACAGCCCTTGAAGTTAAACGTGATCGAGAACCTG
AAGGGCATCGGAAACGTCCTAAGGCCATACTTCGCGATTTATGACTCGAG
CACACACGCAGGAAACGGGCGCGATGTCGCCCAAGATCTTGGTCAAGAAT
TAGTGACTCAGCTAGAAAAAGCTGTCATAATTTTGGACGAAGCTGCATCT
GACTCGTCTTCAGATGATGATTCCTCTGACAACTCATCTGAGAGCAGCGA
GAGTGAGTATAATCGTTTTGGGCGGCTCCACTGCTATGTCAACTGCTTGA
TGGAGCTGGTTCCAGTGATCGAGAGGAACATTTCGCGCTTGAAAAAGGAG
GAGCAGTCGCAGCACGTGCCACTCCAGAGCGAATTTCGGTTGTCCCAGGA
TGCGCAGCCTTTTGCCATGCGCATTCGAGATCGGTCGGATCCCTCCCTAC
TCAATCTTTACTCTTCAGAAGCCAACCTGGAAAGATCTATTCGCGTCAGG
GAAAATGAAGTCGACGACGAAGTATTAGATGCTCTGACTCTATTCAAGCC
CTATTCTCAGTTCTGTGATTCCGCCATCGGGACATCTCTCGCCCCAACAT
CACGCTACGCTGCAACTACAGCGTCACATACCTCATTCCTGTCAGTGACT
GGAGATGAAGGGAAAGGTCGACCTCGAGTACCCCCTCTACCAGTAAATTT
ATTGGAAGTAAGTACCTTGGTTCGAATTGCTATCACGAGTGGACGCGCAG
CTAACTTATCAGGATGCACGTTTATTCAGAGTTGGAGTCATACCTGTGCA
CACATGAAGATTGCAGAGACTCCTTCAAAACGTTCCGAAGCCGCAACCTA
TGCCGAGAGAGAGTTCATTGATCATTTGGTAAAAGTTCACAGCCTTGACA
TCGCTGGGAGTCTTTTGAATACAACAGTGTCAAGGGCTGAGGAGAGAGTT
TTGAAGCCCCAATTCAAAGATCATAAGTGCGCACTGTGTTTAGAATCTGG
TTGGAAGTCCAAGAAGGAGTATGCAACACATGTAGGAAGGCACTTGGAAG
AAGTATCTCTCGCATGTCTTCCAATAGAGGAGGAAGGGGTTAGCGACGTT
GACTCAAATGCTGACAGGTGGACCAATGCGACTAAGGGAAGTGAACACGA
AGCTGAGATCATCGATGAAATATCGGAAGATAATGACGCTCAAGCCGTTT
TAAAGTCGGGCCCGGAGATTTTTGGAGTCAGTCATCCTTCGAAACGTACA
CCATCCAAGGGAAGTAAGTCTCTAAGCCTCGAGAACCTGCCTCCTATCAT
CAAGCAGTTCCAGTTCAGGTGCAAAGAGCCCGGCTGCAAGGCGCCTTTCA
AGAGGCAGGAGCACCTGAGGCGCCACATGAAGACCCACTCCAAAGAGAAG
CCTCATGTTTGCTGGGTGCCCGGCTGCCACCGTGCGTTCGGTCGCAGTGA
CAGCCTCAACGCCCACTACACCAAAACCCACAGCAAGCGGGGAGGACGAA
ACCGCTACGTCGCTACCCTAGATGAGAATAGTTCGGACTACAACCCGGAA
TACCGTGGCCAGCTCACCCCTGACGGCCGCCCTATTTGCGGATCCAAGCT
CGAGGACCCCAACCCCGATTGTGGCAACCTGAGTGTTGAGGGGCATTTAC
CAGTTGCTGAGCCAGAAACATATGAGATACCGGTCGGCAAAAATCTTTTG
AATACAGCAAAACCCCCTGTATCCCCCAAGGGGGGACCATGAATGGCGGA
GGCGTTTGAAGACTCGACCAAGTTAGCAGAGGATTGGCTCACGTACAGGA
CTGATCAGAGCACTCTTGATCCGAATTTGGGCTTCGTTGAACTATTCTAT
CAAACCTGCTCGGCTGCTCTGGTCCATCTCTGGAGATCTCATTTCCGATC
AACAATTCGAGGGTCCCACAGAAACACATTGAAGAAGGATGTTGCCAACA
TTGATTTATGGGAAGAAAAATTTCCAATTGGGCACCTTGATACTATTCTG
GGACGATCACAGCCCTTGAAGTTAAACGTGATCGAGAACCTGAAGGGCAT
CGGAAACGTCCTAAGGCCATACTTCGCGATTTATGACTCGAGCACACACG
CAGGAAACGGGCGCGATGTCGCCCAAGATCTTGGTCAAGAATTAGTGACT
CAGCTAGAAAAAGCTGTCATAATTTTGGACGAAGCTGCATCTGACTCGTC
TTCAGATGATGATTCCTCTGACAACTCATCTGAGAGCAGCGAGAGTGAGT
ATAATCGTTTTGGGCGGCTCCACTGCTATGTCAACTGCTTGATGGAGCTG
GTTCCAGTGATCGAGAGGAACATTTCGCGCTTGAAAAAGGAGGAGCAGTC
GCAGCACGTGCCACTCCAGAGCGAATTTCGGTTGTCCCAGGATGCGCAGC
CTTTTGCCATGCGCATTCGAGATCGGTCGGATCCCTCCCTACTCAATCTT
TACTCTTCAGAAGCCAACCTGGAAAGATCTATTCGCGTCAGGGAAAATGA
AGTCGACGACGAAGTATTAGATGCTCTGACTCTATTCAAGCCCTATTCTC
AGTTCTGTGATTCCGCCATCGGGACATCTCTCGCCCCAACATCACGCTAC
GCTGCAACTACAGCGTCACATACCTCATTCCTGTCAGTGACTGGAGATGA
AGGGAAAGGTCGACCTCGAGTACCCCCTCTACCAGTAAATTTATTGGAAG
TAAGTACCTTGGTTCGAATTGCTATCACGAGTGGACGCGCAGCTAACTTA
TCAGGATGCACGTTTATTCAGAGTTGGAGTCATACCTGTGCACACATGAA
GATTGCAGAGACTCCTTCAAAACGTTCCGAAGCCGCAACCTATGCCGAGA
GAGAGTTCATTGATCATTTGGTAAAAGTTCACAGCCTTGACATCGCTGGG
AGTCTTTTGAATACAACAGTGTCAAGGGCTGAGGAGAGAGTTTTGAAGCC
CCAATTCAAAGATCATAAGTGCGCACTGTGTTTAGAATCTGGTTGGAAGT
CCAAGAAGGAGTATGCAACACATGTAGGAAGGCACTTGGAAGAAGTATCT
CTCGCATGTCTTCCAATAGAGGAGGAAGGGGTTAGCGACGTTGACTCAAA
TGCTGACAGGTGGACCAATGCGACTAAGGGAAGTGAACACGAAGCTGAGA
TCATCGATGAAATATCGGAAGATAATGACGCTCAAGCCGTTTTAAAGTCG
GGCCCGGAGATTTTTGGAGTCAGTCATCCTTCGAAACGTACACCATCCAA
GGGAAGTAAGTCTCTAAGCCTCGAGAACCTGCCTCCTATCATCAAGCAGT
TCCAGTTCAGGTGCAAAGAGCCCGGCTGCAAGGCGCCTTTCAAGAGGCAG
GAGCACCTGAGGCGCCACATGAAGACCCACTCCAAAGAGAAGCCTCATGT
TTGCTGGGTGCCCGGCTGCCACCGTGCGTTCGGTCGCAGTGACAGCCTCA
ACGCCCACTACACCAAAACCCACAGCAAGCGGGGAGGACGAAACCGCTAC
GTCGCTACCCTAGATGAGAATAGTTCGGACTACAACCCGGAATACCGTGG
CCAGCTCACCCCTGACGGCCGCCCTATTTGCGGATCCAAGCTCGAGGACC
CCAACCCCGATTGTGGCAACCTGAGTGTTGAGGGGCATTTACCAGTTGCT
GAGCCAGAAACATATGAGATACCGGTCGGCAAAAATCTTTTGAATACAGC
AAAACCCCCTGTATCCCCCAAGGGGGGACCATGAATGGCGGAGGCGTTTG
AAGACTCGACCAAGTTAGCAGAGGATTGGCTCACGTACAGGACTGATCAG
AGCACTCTTGATCCGAATTTGGGCTTCGTTGAACTATTCTATCAAACCTG
CTCGGCTGCTCTGGTCCATCTCTGGAGATCTCATTTCCGATCAACAATTC
GAGGGTCCCACAGAAACACATTGAAGAAGGATGTTGCCAACATTGATTTA
TGGGAAGAAAAATTTCCAATTGGGCACCTTGATACTATTCTGGGACGATC
ACAGCCCTTGAAGTTAAACGTGATCGAGAACCTGAAGGGCATCGGAAACG
TCCTAAGGCCATACTTCGCGATTTATGACTCGAGCACACACGCAGGAAAC
GGGCGCGATGTCGCCCAAGATCTTGGTCAAGAATTAGTGACTCAGCTAGA
AAAAGCTGTCATAATTTTGGACGAAGCTGCATCTGACTCGTCTTCAGATG
ATGATTCCTCTGACAACTCATCTGAGAGCAGCGAGAGTGAGTATAATCGT
TTTGGGCGGCTCCACTGCTATGTCAACTGCTTGATGGAGCTGGTTCCAGT
GATCGAGAGGAACATTTCGCGCTTGAAAAAGGAGGAGCAGTCGCAGCACG
TGCCACTCCAGAGCGAATTTCGGTTGTCCCAGGATGCGCAGCCTTTTGCC
ATGCGCATTCGAGATCGGTCGGATCCCTCCCTACTCAATCTTTACTCTTC
AGAAGCCAACCTGGAAAGATCTATTCGCGTCAGGGAAAATGAAGTCGACG
ACGAAGTATTAGATGCTCTGACTCTATTCAAGCCCTATTCTCAGTTCTGT
GATTCCGCCATCGGGACATCTCTCGCCCCAACATCACGCTACGCTGCAAC
TACAGCGTCACATACCTCATTCCTGTCAGTGACTGGAGATGAAGGGAAAG
GTCGACCTCGAGTACCCCCTCTACCAGTAAATTTATTGGAAGTAAGTACC
TTGGTTCGAATTGCTATCACGAGTGGACGCGCAGCTAACTTATCAGGATG
CACGTTTATTCAGAGTTGGAGTCATACCTGTGCACACATGAAGATTGCAG
AGACTCCTTCAAAACGTTCCGAAGCCGCAACCTATGCCGAGAGAGAGTTC
ATTGATCATTTGGTAAAAGTTCACAGCCTTGACATCGCTGGGAGTCTTTT
GAATACAACAGTGTCAAGGGCTGAGGAGAGAGTTTTGAAGCCCCAATTCA
AAGATCATAAGTGCGCACTGTGTTTAGAATCTGGTTGGAAGTCCAAGAAG
GAGTATGCAACACATGTAGGAAGGCACTTGGAAGAAGTATCTCTCGCATG
TCTTCCAATAGAGGAGGAAGGGGTTAGCGACGTTGACTCAAATGCTGACA
GGTGGACCAATGCGACTAAGGGAAGTGAACACGAAGCTGAGATCATCGAT
GAAATATCGGAAGATAATGACGCTCAAGCCGTTTTAAAGTCGGGCCCGGA
GATTTTTGGAGTCAGTCATCCTTCGAAACGTACACCATCCAAGGGAAGTA
AGTCTCTAAGCCTCGAGAACCTGCCTCCTATCATCAAGCAGTTCCAGTTC
AGGTGCAAAGAGCCCGGCTGCAAGGCGCCTTTCAAGAGGCAGGAGCACCT
GAGGCGCCACATGAAGACCCACTCCAAAGAGAAGCCTCATGTTTGCTGGG
TGCCCGGCTGCCACCGTGCGTTCGGTCGCAGTGACAGCCTCAACGCCCAC
TACACCAAAACCCACAGCAAGCGGGGAGGACGAAACCGCTACGTCGCTAC
CCTAGATGAGAATAGTTCGGACTACAACCCGGAATACCGTGGCCAGCTCA
CCCCTGACGGCCGCCCTATTTGCGGATCCAAGCTCGAGGACCCCAACCCC
GATTGTGGCAACCTGAGTGTTGAGGGGCATTTACCAGTTGCTGAGCCAGA
AACATATGAGATACCGGTCGGCAAAAATCTTTTGAATACAGCAAAACCCC
CTGTATCCCCCAAGGGGGGACCATGAATGGCGGAGGCGTTTGAAGACTCG
ACCAAGTTAGCAGAGGATTGGCTCACGTACAGGACTGATCAGAGCACTCT
TGATCCGAATTTGGGCTTCGTTGAACTATTCTATCAAACCTGCTCGGCTG
CTCTGGTCCATCTCTGGAGATCTCATTTCCGATCAACAATTCGAGGGTCC
CACAGAAACACATTGAAGAAGGATGTTGCCAACATTGATTTATGGGAAGA
AAAATTTCCAATTGGGCACCTTGATACTATTCTGGGACGATCACAGCCCT
TGAAGTTAAACGTGATCGAGAACCTGAAGGGCATCGGAAACGTCCTAAGG
CCATACTTCGCGATTTATGACTCGAGCACACACGCAGGAAACGGGCGCGA
TGTCGCCCAAGATCTTGGTCAAGAATTAGTGACTCAGCTAGAAAAAGCTG
TCATAATTTTGGACGAAGCTGCATCTGACTCGTCTTCAGATGATGATTCC
TCTGACAACTCATCTGAGAGCAGCGAGAGTGAGTATAATCGTTTTGGGCG
GCTCCACTGCTATGTCAACTGCTTGATGGAGCTGGTTCCAGTGATCGAGA
GGAACATTTCGCGCTTGAAAAAGGAGGAGCAGTCGCAGCACGTGCCACTC
CAGAGCGAATTTCGGTTGTCCCAGGATGCGCAGCCTTTTGCCATGCGCAT
TCGAGATCGGTCGGATCCCTCCCTACTCAATCTTTACTCTTCAGAAGCCA
ACCTGGAAAGATCTATTCGCGTCAGGGAAAATGAAGTCGACGACGAAGTA
TTAGATGCTCTGACTCTATTCAAGCCCTATTCTCAGTTCTGTGATTCCGC
CATCGGGACATCTCTCGCCCCAACATCACGCTACGCTGCAACTACAGCGT
CACATACCTCATTCCTGTCAGTGACTGGAGATGAAGGGAAAGGTCGACCT
CGAGTACCCCCTCTACCAGTAAATTTATTGGAAGTAAGTACCTTGGTTCG
AATTGCTATCACGAGTGGACGCGCAGCTAACTTATCAGGATGCACGTTTA
TTCAGAGTTGGAGTCATACCTGTGCACACATGAAGATTGCAGAGACTCCT
TCAAAACGTTCCGAAGCCGCAACCTATGCCGAGAGAGAGTTCATTGATCA
TTTGGTAAAAGTTCACAGCCTTGACATCGCTGGGAGTCTTTTGAATACAA
CAGTGTCAAGGGCTGAGGAGAGAGTTTTGAAGCCCCAATTCAAAGATCAT
AAGTGCGCACTGTGTTTAGAATCTGGTTGGAAGTCCAAGAAGGAGTATGC
AACACATGTAGGAAGGCACTTGGAAGAAGTATCTCTCGCATGTCTTCCAA
TAGAGGAGGAAGGGGTTAGCGACGTTGACTCAAATGCTGACAGGTGGACC
AATGCGACTAAGGGAAGTGAACACGAAGCTGAGATCATCGATGAAATATC
GGAAGATAATGACGCTCAAGCCGTTTTAAAGTCGGGCCCGGAGATTTTTG
GAGTCAGTCATCCTTCGAAACGTACACCATCCAAGGGAAGTAAGTCTCTA
AGCCTCGAGAACCTGCCTCCTATCATCAAGCAGTTCCAGTTCAGGTGCAA
AGAGCCCGGCTGCAAGGCGCCTTTCAAGAGGCAGGAGCACCTGAGGCGCC
ACATGAAGACCCACTCCAAAGAGAAGCCTCATGTTTGCTGGGTGCCCGGC
TGCCACCGTGCGTTCGGTCGCAGTGACAGCCTCAACGCCCACTACACCAA
AACCCACAGCAAGCGGGGAGGACGAAACCGCTACGTCGCTACCCTAGATG
AGAATAGTTCGGACTACAACCCGGAATACCGTGGCCAGCTCACCCCTGAC
GGCCGCCCTATTTGCGGATCCAAGCTCGAGGACCCCAACCCCGATTGTGG
CAACCTGAGTGTTGAGGGGCATTTACCAGTTGCTGAGCCAGAAACATATG
AGATACCGGTCGGCAAAAATCTTTTGAATACAGCAAAACCCCCTGTATCC
CCCAAGGGGGGACCATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000013.1 | supercontig | ACJE01000013.1:252423..254663 + |
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