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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:676336..677740- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53797-T1 ID=ASPNIDRAFT_53797-T1|Name=ASPNIDRAFT_53797-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1405bp|location=Sequence derived from alignment at ACJE01000002.1:676336..677740- (Aspergillus niger ATCC 1015)
CTTTCATCTTCATTCCCTTCGTTGCTTTCCGCTTCATTGACTGAGGCTTT
CACACTCTTTGCGCTGCGCGCTCACTCTTTACAAACACTCTACATACATT
ACTTTACATTCTCTACAAACTTTTCCTTCTCCAAAAACCACTCTAGCAAT
CATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCA
CCCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGACGGTGTC
TACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGACCCCCC
GAAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCATCTCGC
CCGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCCACCAAC
GCCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACATCCAGTG
GACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACCTGGCTC
GTTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAGTTCTTC
AAGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGGTACCTG
GGGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCGAGATCC
CTCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTCATCGCT
CTCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCAGTGCTT
CAACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTGTCAAGG
GTACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAACATCTAC
TCCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAGCGGCGA
TGTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCACCGCCG
TGGTTGGCAGTGCTAGCGCCGTCGCTTCCGCTTCCTCGACCGCTGCCGCC
GCTACCAGCGCTGCTGCCGTGACCAGCGCTGCTGCCGTGACCAGCGTTGA
CACCAACACCCAGATCGCTCAGTCCAGCAGTGCCCCTGCCCCTGCTGCCC
CTAGCTCCAGCTCCTCCGCCTACACTCAGATCCCCGTGCAGGTCCCCTCT
TCTTGGACTACCCTGTTGACCTTCACCAACACTCCCCAGGCTGTGCAGCC
TACTACCTCGGTCCAGCCCGAGCCTGCTCAGTCGACTATCACCCCTGCTC
CGGCTGTTAGCTCTGCTGCCTCCGGTAGCTCCGGTAGCCAGTCTCTGTAC
GGCCAGTGCGGTGGTATCAACTGGACTGGTGCTACTCAGTGCGCGAGCGG
ATCTAGCTGCCACTCGTACAACCCTTACTACTACCAGTGCATTGCTAGTG
CTTAA back to topCoding sequence (CDS) from alignment at ACJE01000002.1:676336..677740- >ASPNIDRAFT_53797-T1 ID=ASPNIDRAFT_53797-T1|Name=ASPNIDRAFT_53797-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2052bp|location=Sequence derived from alignment at ACJE01000002.1:676336..677740- (Aspergillus niger ATCC 1015)
CCTACTACCTCGGTCCAGCCCGAGCCTGCTCAGTCGACTATCACCCCTGC
TCCGGCTGTTAGCTCTGCTGCCTCCGGTAGCTCCGGTAGCCAGTCTCTGT
ACGGCCAGTGCGGTGGTATCAACTGGACTGGTGCTACTCAGTGCGCGAGC
GGATCTAGCTGCCACTCGTACAACCCTTACTACTACCAGTGCATTGCTAG
TGCTTAAATGCGTCAAGCTCAGTCTGCTTCTCTCCTCGCGGCCCTTCTGT
CGGCCACCCAGGTCGCTGCCCACGGTCACGTCACTAACCTCGTCGTCGAC
GGTGTCTACTACGAGGGCTTCGACATCAGCGTCTTCCCTTACGAGTCCGA
CCCCCCGAAGGTCGCCGCCTGGACGACCCCCAACACCGGTAACGGCTTCA
TCTCGCCCGACGAGTACCGCAACCCCAACATCATCTGTCACGAGAACGCC
ACCAACGCCCAGGCCCACGTTGTCGTCGGTGCCGGTGAGAAGATCAACAT
CCAGTGGACTGCCTGGCCCGACTCCCACCACGGTCCCGTCCTGGACTACC
TGGCTCGTTGTGACGGCAGCTGCGAGACCGTCGACAAAACCGACCTGGAG
TTCTTCAAGATCGACGGCGTCGGTCTCGTCAGCGACACCGAGGTCCCCGG
TACCTGGGGTACCGACCAGCTGATCAACAACAACAACAGCTGGATGGTCG
AGATCCCTCCCTCCATTGCCGCTGGTAACTACGTCCTCCGTCACGAGCTC
ATCGCTCTCCACGGCGCTGAGGAGCAGGACGGCGCCCAGAACTACCCCCA
GTGCTTCAACCTCCAGGTCACCGGTACCGGTACCGCCACTCCCTCCGGTG
TCAAGGGTACCGAGCTCTACACTGCCACTGAGGGCGGTATCCTCGTCAAC
ATCTACTCCTCCCTGAGCACTTACACTATGCCCGGCCCTACTGCCTACAG
CGGCGATGTCTCCATCACTCAGACTACTTCCGCTGTCACTTCCACCGGCA
CCGCCGTGGTTGGCAGTGCTAGCGCCCCTACTACCTCGGTCCAGCCCGAG
CCTGCTCAGTCGACTATCACCCCTGCTCCGGCTGTTAGCTCTGCTGCCTC
CGGTAGCTCCGGTAGCCAGTCTCTGTACGGCCAGTGCGGTGGTATCAACT
GGACTGGTGCTACTCAGTGCGCGAGCGGATCTAGCTGCCACTCGTACAAC
CCTTACTACTACCAGTGCATTGCTAGTGCTTAAATGCGTCAAGCTCAGTC
TGCTTCTCTCCTCGCGGCCCTTCTGTCGGCCACCCAGGTCGCTGCCCACG
GTCACGTCACTAACCTCGTCGTCGACGGTGTCTACTACGAGGGCTTCGAC
ATCAGCGTCTTCCCTTACGAGTCCGACCCCCCGAAGGTCGCCGCCTGGAC
GACCCCCAACACCGGTAACGGCTTCATCTCGCCCGACGAGTACCGCAACC
CCAACATCATCTGTCACGAGAACGCCACCAACGCCCAGGCCCACGTTGTC
GTCGGTGCCGGTGAGAAGATCAACATCCAGTGGACTGCCTGGCCCGACTC
CCACCACGGTCCCGTCCTGGACTACCTGGCTCGTTGTGACGGCAGCTGCG
AGACCGTCGACAAAACCGACCTGGAGTTCTTCAAGATCGACGGCGTCGGT
CTCGTCAGCGACACCGAGGTCCCCGGTACCTGGGGTACCGACCAGCTGAT
CAACAACAACAACAGCTGGATGGTCGAGATCCCTCCCTCCATTGCCGCTG
GTAACTACGTCCTCCGTCACGAGCTCATCGCTCTCCACGGCGCTGAGGAG
CAGGACGGCGCCCAGAACTACCCCCAGTGCTTCAACCTCCAGGTCACCGG
TACCGGTACCGCCACTCCCTCCGGTGTCAAGGGTACCGAGCTCTACACTG
CCACTGAGGGCGGTATCCTCGTCAACATCTACTCCTCCCTGAGCACTTAC
ACTATGCCCGGCCCTACTGCCTACAGCGGCGATGTCTCCATCACTCAGAC
TACTTCCGCTGTCACTTCCACCGGCACCGCCGTGGTTGGCAGTGCTAGCG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005576 | extracellular region |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0005975 | carbohydrate metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0030248 | cellulose binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-21) |
| Note | CAZy:AA9 |
| DBxref | InterPro:IPR035971 |
| DBxref | InterPro:IPR005103 |
| DBxref | InterPro:IPR000254 |
| DBxref | PFAM:PF03443 |
| DBxref | PFAM:PF00734 |
| Product | glycoside hydrolase 61 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:676336..677740 - |
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