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ASPNIDRAFT_53848-T1, ASPNIDRAFT_53848-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_53848-T1
Unique NameASPNIDRAFT_53848-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000002.1:1106066..1107083+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_53848-T1 ID=ASPNIDRAFT_53848-T1|Name=ASPNIDRAFT_53848-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1018bp|location=Sequence derived from alignment at ACJE01000002.1:1106066..1107083+ (Aspergillus niger ATCC 1015)
GGATAACTGAAGGCTGTGAATAATTATTCTTGATTCATCTATCAATCATG
GCTACCACTCTACTCATCACTGGAGCCACCGGAAACCAAGGGGGTGCGGT
CATTAATGCTCTGCTGGCGCAGGACGCAGACGTTGAGATCCTCGCCGTGA
CCCGCAACCCGCAGTCAGGAACATCGCAGAAGCTTGCCGGAAAGTCTCCC
AAAATTAAGCTAGTTCAGGGCGACCTTGATCATCCATCGGAGATCTTCGA
AAATGCGAAGAAACTCGCCACTCGGCCCATCTCTGGGGTCTTTAGCGTTC
AGGTAGTCTCCAGCCATATGCTTTCCACCCACCCGCGGTAATAGTTAACG
CAAGATAGAACCCTATGGCGAAAGGTCAAAATGTAGACAAAGAAGAAGTC
CAAGGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGACATCAGACACTT
TGTCTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCACGGACAATCCAA
CCAATATCCCTCATTTCATCAGCAAACATCGCATCGAACACCATCTGTTC
GAGCAAACCAAGGATGGAGCCATGACATGGACTGTCCTCCGTCCGGTGTT
CTTTTTCGAGAACCTTGTCCCGAGCTTCATAGGCAAGCTGAGCGCCACAG
CCTGGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGCGTTGCGGTCAGC
GATATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCCACAAAACTACAA
GAATCAGTGTATTTCTCTCGCCGGAGATGACTTGACATTCGAACATATGC
AGAAGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCAACCACATACCGG
GTGGTCTGTTATGTACTGATGTGGATGGTCACTGATTTGCGGCTTATGTT
CAACTGGTTCTACAGTCATGGCTACGGTGCAGATATTCAGGGTCTAAGGA
AGATACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTGGAAGAGGACAGC
GAATGGGTGAAGCACTGA
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Coding sequence (CDS) from alignment at ACJE01000002.1:1106066..1107083+

>ASPNIDRAFT_53848-T1 ID=ASPNIDRAFT_53848-T1|Name=ASPNIDRAFT_53848-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=1830bp|location=Sequence derived from alignment at ACJE01000002.1:1106066..1107083+ (Aspergillus niger ATCC 1015)
ATGGCTACCACTCTACTCATCACTGGAGCCACCGGAAACCAAGGGGGTGC
GGTCATTAATGCTCTGCTGGCGCAGGACGCAGACGTTGAGATCCTCGCCG
TGACCCGCAACCCGCAGTCAGGAACATCGCAGAAGCTTGCCGGAAAGTCT
CCCAAAATTAAGCTAGTTCAGGGCGACCTTGATCATCCATCGGAGATCTT
CGAAAATGCGAAGAAACTCGCCACTCGGCCCATCTCTGGGGTCTTTAGCG
TTCAGAACCCTATGGCGAAAGGTCAAAATGTAGACAAAGAAGAAGTCCAA
GGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGACATCAGACACTTTGT
CTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCACGGACAATCCAACCA
ATATCCCTCATTTCATCAGCAAACATCGCATCGAACACCATCTGTTCGAG
CAAACCAAGGATGGAGCCATGACATGGACTGTCCTCCGTCCGGTGTTCTT
TTTCGAGAACCTTGTCCCGAGCTTCATAGGCAAGCTGAGCGCCACAGCCT
GGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGCGTTGCGGTCAGCGAT
ATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCCACAAAACTACAAGAA
TCAGTGTATTTCTCTCGCCGGAGATGACTTGACATTCGAACATATGCAGA
AGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCAACCACATACCGGGTG
GTCTGTTATGTACTGATGTGGATGGTCACTGATTTGCGGCTTATGTTCAA
CTGGTTCTACAGTCATGGCTACGGTGCAGATATTCAGGGTCTAAGGAAGA
TACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTGGAAGAGGACAGCGAA
TGGGTGAAGCACTGAATGGCTACCACTCTACTCATCACTGGAGCCACCGG
AAACCAAGGGGGTGCGGTCATTAATGCTCTGCTGGCGCAGGACGCAGACG
TTGAGATCCTCGCCGTGACCCGCAACCCGCAGTCAGGAACATCGCAGAAG
CTTGCCGGAAAGTCTCCCAAAATTAAGCTAGTTCAGGGCGACCTTGATCA
TCCATCGGAGATCTTCGAAAATGCGAAGAAACTCGCCACTCGGCCCATCT
CTGGGGTCTTTAGCGTTCAGAACCCTATGGCGAAAGGTCAAAATGTAGAC
AAAGAAGAAGTCCAAGGTAAAGCCTTGGTTGATGAATCCATCAAGCAAGA
CATCAGACACTTTGTCTACAGCTCCGTCGATCGCGGTGGTGATGCCTCCA
CGGACAATCCAACCAATATCCCTCATTTCATCAGCAAACATCGCATCGAA
CACCATCTGTTCGAGCAAACCAAGGATGGAGCCATGACATGGACTGTCCT
CCGTCCGGTGTTCTTTTTCGAGAACCTTGTCCCGAGCTTCATAGGCAAGC
TGAGCGCCACAGCCTGGGATGCCTACCTGCAGGGCAAACCGCTGCAGTGC
GTTGCGGTCAGCGATATTGGGGTGTTTGCAGCCAAGGCTCTTCTCGAGCC
ACAAAACTACAAGAATCAGTGTATTTCTCTCGCCGGAGATGACTTGACAT
TCGAACATATGCAGAAGTTGTTCAAGGCGAAAACGGGGGAGACGATGCCA
ACCACATACCGGGTGGTCTGTTATGTACTGATGTGGATGGTCACTGATTT
GCGGCTTATGTTCAACTGGTTCTACAGTCATGGCTACGGTGCAGATATTC
AGGGTCTAAGGAAGATACATCCTGGCCTGAAGAACTTTGAAGCGTGGCTG
GAAGAGGACAGCGAATGGGTGAAGCACTGA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53848ASPNIDRAFT_53848Aspergillus niger ATCC 1015gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53848-T1.utr5p1ASPNIDRAFT_53848-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53848-T1.exon1ASPNIDRAFT_53848-T1.exon1Aspergillus niger ATCC 1015exon
ASPNIDRAFT_53848-T1.exon2ASPNIDRAFT_53848-T1.exon2Aspergillus niger ATCC 1015exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53848-T1.cdsASPNIDRAFT_53848-T1.cdsAspergillus niger ATCC 1015CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_53848-T1ASPNIDRAFT_53848-T1-proteinAspergillus niger ATCC 1015polypeptide


Properties
Property NameValue
NoteEggNog:ENOG41
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR008030
DBxrefPFAM:PF05368
DBxrefPFAM:PF13460
DBxrefPFAM:PF01370
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000002.1supercontigACJE01000002.1:1106066..1107083 +
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