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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000002.1:1509882..1511241+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53893-T1 ID=ASPNIDRAFT_53893-T1|Name=ASPNIDRAFT_53893-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1360bp|location=Sequence derived from alignment at ACJE01000002.1:1509882..1511241+ (Aspergillus niger ATCC 1015)
CTTTATCCCCCCGTCCTCCCCCAGTCACTCGTCTCGCCATGGCTCATTGC
GAGCGGGCCTCCAAGCCCCTGCTCCAATGCCTGCAGAAGACCTACACAAA
GGGTCTTCCAGGCCTCCAGCTACAGTCCACCCGCGCCTTTCAGTCCACCG
CTCTGGCTCGCGAGGAAGCCCAGACTGAGGCCAAGAGCGCTCCCTTCCAC
AAGGCGCCTGATCCGGCCCTAGTAACGAGTCCCCGGCTGGAACGGAGGTT
GTTACGCCAGGGAATCGCCCCCGTCGGATCTCGTCGACGTCGAGCTGCCC
TCCAGGGCTCATCCAACATTCCCTTCGAGCAGCTGCCCTTCCAATGTTTC
CAGGAGGCACGCAAGGTTTTGATCGCAGACCGGGAAGAGAAGGTGCGCGA
TATCCAGTCGATGAGCGAGAAGATTGCCAGACTTCAGGCCCTTCCTACCG
AGGAGGCCGGCGGCTTGCAGGTCAAGAAATCCAAGCTCCGGGCCATGGAG
CTCCATCTGGAGCACCTCAAGATCCTTGCGGATGTCAACGACCCGCTGGT
CAAGAAGAAGTTTGAGGATGGGCAAGGTGAGACAACACATTCTACAAATT
GCCTTCATCACCGCATCCTAACCGACCTCGTCTAGGTGACCTCAGCAAGC
CCATCTACCGCTACCTGGCCGATCGGAAATGGAGGGAATACCGTCGCAAG
ATCCTCGTCCAAAGAATCACGCAAATGAAGGTGATTCCCGACGTCCTTCC
TCACTGCGACCCTATCGTGGACACCAAGCTCTACTTCAACCGCAGCCAGG
TACAGCCTGGAGAATACGTCAACGCCAAGGTCAGCACGACGGCACCTAAA
CTTGACGTGCAGCTCTTCGAGGGCGGCGAGAAGCTCGTCACCATCGCCGT
GGTCGACTCCGATGTTCCCAACGTTGAGAAGGATGGATTCGATTTCAAGA
TGCACTACCTGGCTGTCAACGTCCCCATCTCGGCCACGAACACCAAGGTC
GACCTGGCCCAGCTGTCGGCTGAGTCGCAGGTTGTCCTGCCCTGGGAGCC
CCCTGTAGCTCAGAAGGGAAGCCCCTACCACCGACTGTCTCTGTTCATTC
TCGAACAGAAGGACTCCAAGCCATTGGACTTTGCTGCCGTCAAGGCGAAG
GAGACGAACCGCGAGAACCTGCTGCCCCGCACCCTGCAGGCCCGGTACCA
CCTGAAGGCGATTGGCGCGCACCTGTTCCGCACGCAATGGGACGAGACGA
CGTATGAGGTGATGAAGCAGATTGGCTTCCCCGAGGCGAACATGGAGCTC
CGTCGGAAGCGGGTCGAGCCTCTTCCTTACAAGAGAAGAAACCCATCCAC
GTTCCGGTAA back to topCoding sequence (CDS) from alignment at ACJE01000002.1:1509882..1511241+ >ASPNIDRAFT_53893-T1 ID=ASPNIDRAFT_53893-T1|Name=ASPNIDRAFT_53893-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2526bp|location=Sequence derived from alignment at ACJE01000002.1:1509882..1511241+ (Aspergillus niger ATCC 1015)
ATGGCTCATTGCGAGCGGGCCTCCAAGCCCCTGCTCCAATGCCTGCAGAA
GACCTACACAAAGGGTCTTCCAGGCCTCCAGCTACAGTCCACCCGCGCCT
TTCAGTCCACCGCTCTGGCTCGCGAGGAAGCCCAGACTGAGGCCAAGAGC
GCTCCCTTCCACAAGGCGCCTGATCCGGCCCTAGTAACGAGTCCCCGGCT
GGAACGGAGGTTGTTACGCCAGGGAATCGCCCCCGTCGGATCTCGTCGAC
GTCGAGCTGCCCTCCAGGGCTCATCCAACATTCCCTTCGAGCAGCTGCCC
TTCCAATGTTTCCAGGAGGCACGCAAGGTTTTGATCGCAGACCGGGAAGA
GAAGGTGCGCGATATCCAGTCGATGAGCGAGAAGATTGCCAGACTTCAGG
CCCTTCCTACCGAGGAGGCCGGCGGCTTGCAGGTCAAGAAATCCAAGCTC
CGGGCCATGGAGCTCCATCTGGAGCACCTCAAGATCCTTGCGGATGTCAA
CGACCCGCTGGTCAAGAAGAAGTTTGAGGATGGGCAAGGTGACCTCAGCA
AGCCCATCTACCGCTACCTGGCCGATCGGAAATGGAGGGAATACCGTCGC
AAGATCCTCGTCCAAAGAATCACGCAAATGAAGGTGATTCCCGACGTCCT
TCCTCACTGCGACCCTATCGTGGACACCAAGCTCTACTTCAACCGCAGCC
AGGTACAGCCTGGAGAATACGTCAACGCCAAGGTCAGCACGACGGCACCT
AAACTTGACGTGCAGCTCTTCGAGGGCGGCGAGAAGCTCGTCACCATCGC
CGTGGTCGACTCCGATGTTCCCAACGTTGAGAAGGATGGATTCGATTTCA
AGATGCACTACCTGGCTGTCAACGTCCCCATCTCGGCCACGAACACCAAG
GTCGACCTGGCCCAGCTGTCGGCTGAGTCGCAGGTTGTCCTGCCCTGGGA
GCCCCCTGTAGCTCAGAAGGGAAGCCCCTACCACCGACTGTCTCTGTTCA
TTCTCGAACAGAAGGACTCCAAGCCATTGGACTTTGCTGCCGTCAAGGCG
AAGGAGACGAACCGCGAGAACCTGCTGCCCCGCACCCTGCAGGCCCGGTA
CCACCTGAAGGCGATTGGCGCGCACCTGTTCCGCACGCAATGGGACGAGA
CGACGTATGAGGTGATGAAGCAGATTGGCTTCCCCGAGGCGAACATGGAG
CTCCGTCGGAAGCGGGTCGAGCCTCTTCCTTACAAGAGAAGAAACCCATC
CACGTTCCGGTAAATGGCTCATTGCGAGCGGGCCTCCAAGCCCCTGCTCC
AATGCCTGCAGAAGACCTACACAAAGGGTCTTCCAGGCCTCCAGCTACAG
TCCACCCGCGCCTTTCAGTCCACCGCTCTGGCTCGCGAGGAAGCCCAGAC
TGAGGCCAAGAGCGCTCCCTTCCACAAGGCGCCTGATCCGGCCCTAGTAA
CGAGTCCCCGGCTGGAACGGAGGTTGTTACGCCAGGGAATCGCCCCCGTC
GGATCTCGTCGACGTCGAGCTGCCCTCCAGGGCTCATCCAACATTCCCTT
CGAGCAGCTGCCCTTCCAATGTTTCCAGGAGGCACGCAAGGTTTTGATCG
CAGACCGGGAAGAGAAGGTGCGCGATATCCAGTCGATGAGCGAGAAGATT
GCCAGACTTCAGGCCCTTCCTACCGAGGAGGCCGGCGGCTTGCAGGTCAA
GAAATCCAAGCTCCGGGCCATGGAGCTCCATCTGGAGCACCTCAAGATCC
TTGCGGATGTCAACGACCCGCTGGTCAAGAAGAAGTTTGAGGATGGGCAA
GGTGACCTCAGCAAGCCCATCTACCGCTACCTGGCCGATCGGAAATGGAG
GGAATACCGTCGCAAGATCCTCGTCCAAAGAATCACGCAAATGAAGGTGA
TTCCCGACGTCCTTCCTCACTGCGACCCTATCGTGGACACCAAGCTCTAC
TTCAACCGCAGCCAGGTACAGCCTGGAGAATACGTCAACGCCAAGGTCAG
CACGACGGCACCTAAACTTGACGTGCAGCTCTTCGAGGGCGGCGAGAAGC
TCGTCACCATCGCCGTGGTCGACTCCGATGTTCCCAACGTTGAGAAGGAT
GGATTCGATTTCAAGATGCACTACCTGGCTGTCAACGTCCCCATCTCGGC
CACGAACACCAAGGTCGACCTGGCCCAGCTGTCGGCTGAGTCGCAGGTTG
TCCTGCCCTGGGAGCCCCCTGTAGCTCAGAAGGGAAGCCCCTACCACCGA
CTGTCTCTGTTCATTCTCGAACAGAAGGACTCCAAGCCATTGGACTTTGC
TGCCGTCAAGGCGAAGGAGACGAACCGCGAGAACCTGCTGCCCCGCACCC
TGCAGGCCCGGTACCACCTGAAGGCGATTGGCGCGCACCTGTTCCGCACG
CAATGGGACGAGACGACGTATGAGGTGATGAAGCAGATTGGCTTCCCCGA
GGCGAACATGGAGCTCCGTCGGAAGCGGGTCGAGCCTCTTCCTTACAAGA
GAAGAAACCCATCCACGTTCCGGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09262U7S |
| DBxref | InterPro:IPR035810 |
| DBxref | InterPro:IPR008914 |
| DBxref | InterPro:IPR036610 |
| DBxref | PFAM:PF01161 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000002.1 | supercontig | ACJE01000002.1:1509882..1511241 + |
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