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Sequences
The following sequences are available for this feature:
mRNA from alignment at ACJE01000006.1:1515769..1516931- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >ASPNIDRAFT_53927-T1 ID=ASPNIDRAFT_53927-T1|Name=ASPNIDRAFT_53927-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=1163bp|location=Sequence derived from alignment at ACJE01000006.1:1515769..1516931- (Aspergillus niger ATCC 1015)
ATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAGGT
ACCCCACCCATCCCATACCCACCACCACCACCGCCAGACCCAACATAACT
AACTTCCACCACCAGAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAA
ACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGAGTAAACACCCCC
CAAGAATCCCCACCACCCACCACACTCCGTGGTTAACATAAGAGACAAAA
ACCAGGTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCA
CCACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGAC
ACCCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGC
CCCCACCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCACCC
TCTCCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTC
AAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAG
CCTAATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCC
GCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAG
GCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCT
CTCCGTGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTAATC
GGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTT
TTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGA
TGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCC
CGATTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTAT
GTGTATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTA
TGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTC
CTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGA
CGGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGTGGA
TTGGGAGGGTTAA back to topCoding sequence (CDS) from alignment at ACJE01000006.1:1515769..1516931- >ASPNIDRAFT_53927-T1 ID=ASPNIDRAFT_53927-T1|Name=ASPNIDRAFT_53927-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=3087bp|location=Sequence derived from alignment at ACJE01000006.1:1515769..1516931- (Aspergillus niger ATCC 1015)
GTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCAGCACCACC
CACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCCGACACCCA
GCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTCCGCCCCCA
CCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCACCCTCTCC
CCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTCCTCAAGCT
CCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGCCAGCCTAA
TGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACATCCGCGTC
ACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGCGAGGCCGT
GGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTTTCTCTCCG
TGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTAATCGGGCA
GCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAGGTTTTGGG
GGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGGTGATGAGA
TGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGTTCCCGATT
GTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCCTATGTGTA
TTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGATGTATGAGA
CCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGGTTCCTGTT
GAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTTGGACGGGC
GTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGTGGATTGGG
AGGGTTAAAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCAAACCCGAC
AATTTCACTGACACGAGCTTCAAATCCAAGAATGGGCTCCAGCTCCAAAA
AGAAGAAGGAGAAGCAGAAGGACTTCCAGGTATAACCCTAACCCAACAAT
CCCTAACCCTGCACGCCCCCAGCACCACCCACCAATTCACCCACCACGTC
TCCCTCCTCAACTCCAAATCCGACACCCAGCGCCGAGACTCCCTCGCGCA
TCTAACCACCCATCTCACCTCCGCCCCCACCACCCAACCCCTCCCCATCC
CCGTAAGCACCCTCCTCCCCACCCTCTCCCCCCTAATCCTCGACGCCAGC
ACAACCGTGCGCACCCAGCTCCTCAAGCTCCTCCGCACCCTGCCCCCAGC
CGACGTGGAAGACCACGTCGCCAGCCTAATGCCCTACGTGCGCGCCGGCA
TGACCCACCTGGCCGCCGACATCCGCGTCACCGCCGTGGATGTCCTCTCG
TGGCTGGTCGAGATCGCCGGCGAGGCCGTGGTCTCGTGCGCCGGCGGCTG
GATCAAGACCCTGAATTGCTTTCTCTCCGTGCTGGGTTGGCATACTGAGG
AGAGCTCCAAGTGGTCGAGTAATCGGGCAGCGTTTGGGAAGGCCGGCGCG
AAGGGGAAGCCCATGGTGAAGGTTTTGGGGGTGCTGGCGGAGTTTTTGGA
GGCTGGGATTGGGGAGGATGGTGATGAGATGGAGGTGGATGAGGGTGGTG
GGAGTGGGACTGGTGTTGGGTTCCCGATTGTGCAGACGGAGGTGCATATG
GTGCCTAAGTCGGCGCAGCCCTATGTGTATTTGAATTTGTTTGGGGCGCC
GAGGGATGAGGAAGGGGAGATGTATGAGACCAGGGAGGAGAGGTTCCGTG
TGTTTAAGGGACGGTTTTTGGTTCCTGTTGAGCGCGGGTTGGAGAGTGCG
AGGCAGGATGGCGGGGAGGTTGGACGGGCGTCGTCGGCTGTGAGTAAGGT
GTTGAAGGAGGCTAGGGGGGTGGATTGGGAGGGTTAAAAACCCAAGCTCA
AAGTCGGCAAAGCCAAAGCCAAACCCGACAATTTCACTGACACGAGCTTC
AAATCCAAGAATGGGCTCCAGCTCCAAAAAGAAGAAGGAGAAGCAGAAGG
ACTTCCAGGTATAACCCTAACCCAACAATCCCTAACCCTGCACGCCCCCA
GCACCACCCACCAATTCACCCACCACGTCTCCCTCCTCAACTCCAAATCC
GACACCCAGCGCCGAGACTCCCTCGCGCATCTAACCACCCATCTCACCTC
CGCCCCCACCACCCAACCCCTCCCCATCCCCGTAAGCACCCTCCTCCCCA
CCCTCTCCCCCCTAATCCTCGACGCCAGCACAACCGTGCGCACCCAGCTC
CTCAAGCTCCTCCGCACCCTGCCCCCAGCCGACGTGGAAGACCACGTCGC
CAGCCTAATGCCCTACGTGCGCGCCGGCATGACCCACCTGGCCGCCGACA
TCCGCGTCACCGCCGTGGATGTCCTCTCGTGGCTGGTCGAGATCGCCGGC
GAGGCCGTGGTCTCGTGCGCCGGCGGCTGGATCAAGACCCTGAATTGCTT
TCTCTCCGTGCTGGGTTGGCATACTGAGGAGAGCTCCAAGTGGTCGAGTA
ATCGGGCAGCGTTTGGGAAGGCCGGCGCGAAGGGGAAGCCCATGGTGAAG
GTTTTGGGGGTGCTGGCGGAGTTTTTGGAGGCTGGGATTGGGGAGGATGG
TGATGAGATGGAGGTGGATGAGGGTGGTGGGAGTGGGACTGGTGTTGGGT
TCCCGATTGTGCAGACGGAGGTGCATATGGTGCCTAAGTCGGCGCAGCCC
TATGTGTATTTGAATTTGTTTGGGGCGCCGAGGGATGAGGAAGGGGAGAT
GTATGAGACCAGGGAGGAGAGGTTCCGTGTGTTTAAGGGACGGTTTTTGG
TTCCTGTTGAGCGCGGGTTGGAGAGTGCGAGGCAGGATGGCGGGGAGGTT
GGACGGGCGTCGTCGGCTGTGAGTAAGGTGTTGAAGGAGGCTAGGGGGGT
GGATTGGGAGGGTTAAAAACCCAAGCTCAAAGTCGGCAAAGCCAAAGCCA
AACCCGACAATTTCACTGACACGAGCTTCAAATCCAAGAATGGGCTCCAG
CTCCAAAAAGAAGAAGGAGAAGCAGAAGGACTTCCAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR016024 |
| DBxref | InterPro:IPR024679 |
| DBxref | PFAM:PF12333 |
| Product | rRNA processing protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ACJE01000006.1 | supercontig | ACJE01000006.1:1515769..1516931 - |
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