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ASPNIDRAFT_54156-T1, ASPNIDRAFT_54156-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54156-T1
Unique NameASPNIDRAFT_54156-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:844302..846503-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54156-T1 ID=ASPNIDRAFT_54156-T1|Name=ASPNIDRAFT_54156-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=2202bp|location=Sequence derived from alignment at ACJE01000020.1:844302..846503- (Aspergillus niger ATCC 1015)
CTCCTCCTCCTTCCTCTCCTCTCCCTCCCCCTTATTCTTCTTCATTTTCA
GCGAGTTCCCCTCCTCCCCCACGTCCATCCGCAAGAGTCAAGACCGACGA
CTCATTCCCGACTCGACCTCCGCCCCCTCCTCACCGGGCAAAGACCGTTC
ATTCGGCTCCCTCTCGCCACCCCCATTCTCCTCCTGCGCCTCCGCTTCAC
CATCCGCAGTCGTTTCCTACTCCGACTCAACGCCCTTCCATTCCTCGAAA
ACCTACTCGGCCGGCGCACAGTCGTTCCACCTCCACTCCCTCTAAATCAG
CCTCGGTCCGGTCGAAACCCTCGTCCGTCCCCCGGTCCGCGTCGTCGCTG
TCTGCCGTTCACCATCGGTACTCGCACGACCCTAACTTTCACCCGCTTAA
CCTTCATCCCGACGAACTACGTCGTCTTTCCGCTATGGCTGCTGCTCGCG
ATGATCTCCGGAGCTCGATGGACGTTGACACCAACGATCCCCGCCTCGGC
TCTCCCTCTGCCACCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCC
GACCCCGCCCCCTCACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCT
TCAAGCTGGCAGGAAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCC
ATTGAGGAATTCACCAAGGGTAGGTTTAATACCTGATTCTGCCGGACAAT
CTTCTGCAGTGTTAGTAACAATGGTACAGCTCTCGAGATTAGCCCCAACT
CGTCCGTCTACCTGTCCAACCGGGCTGCAGCATACATGGCGGCCAACCAA
TATCTCGCTGCTCTGGAGGACTGCGAACGGGCCTGCGAGCTCGACCCCAC
CAACACTAAGATCATGTACCGGTTGGCCCGTATCCTGACCAGCTTGGGCC
GTCCGACGGAGGCTCTTGACGTGCTGTCTCGTATCGAGCCCCCGGCCTCC
GCTACTGACCGTGCGGCCGCAGAGAAGATGCTCCGCTTCGTCAGCCAGGC
GGAGGAGGCTCTTTCGCAGGATCGTGGTGTCTCAATGGTGCTGTTCTGCC
TCGACCAGGCCCGTCAGCTCCTCGGACAAGGCGTCAAGGAGCCCCGCAAG
TGGACGCTGATGACTGCAGAGGCCCAGTTGAAGATGGGCAACGACAACTC
GTACGGCAAGGCACAGGACATTGCTATCAGCATGCTCCGCGTGAACAGCC
AGGACCCTGATGCGCTGATGATCCGCGCCCGGGCCTTCTACGGTATGGGT
GACACGGAGCAGGCGCTGAAGCTGCTGAAGATGTGTCTGGGTCTGGATCC
CGATATGAAGGCGGCGATCAAGCTGCTGCGGACTGTGCAGAAGCTGGTAC
GCACCAAGGAAGAGGGTAACACGGCATTCAAGGCCAAGGACTACCGTCGC
GCCATCGACCTGTGGGGTGAGGCGCTGACGGTGGACCCGAAGAACAAGGA
CCAGAACGCCAAGATCCTGCAGAACCGGGCGCAGGCATACATCAACCTGA
AGGAGTACGACAGCGCAGTGGCAGACTGCAACGAGGCCCTGCGGCTGGAC
CCCGGGTACCTCAAGGCGCAGAAGATGCGCGCCAAGGCGCATGGCGGTGC
CGGAAACTGGGAAGAAGCTGTGCGCGACTACAAGGCGGTGGCGGAGTCGA
ACCCGACCGAGAAGGGCATCCAAGAGGAAATCCGTCGGGCCGAGTTTGAG
CTGAAGAAGGCGCAGCGCAAGGATTACTACAAGATCCTCGGAGTGTCCAA
GGACGCGGGCGAGCAAGAGATCAAGAAGGCGTACCGCAAGATGGCGATCC
AGTACCACCCGGACAAGAACCGGGACGGGGATGCGGGTGACGAGAAGTTC
AAGGAGATTGGTGAGGCGTACGAGACTTTGAGTGATCCTCAGTAAGTTCA
TCCTTTGATGTGGTGATGAGTGGCTTTCGCTAACCAAGCATAGGAAACGT
GCTGCCTACGACAACGGCGATGACCTGATGGACCCAGCTGACATGTTCTC
GCACGGCGGCTTCGGCGGCATGGGAGGCATGGGAGGCATGGGCGGTATGG
GCGGTATGGGAGGAATGGGTGGTATGGGTGGTATGGGAGGAACCCATATC
AACATCGACCCCAGCGTGCTGTTCAACATGATGAACGGCGGCGGCGGATT
TGCGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTTCCCTTTT
AG
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Coding sequence (CDS) from alignment at ACJE01000020.1:844302..846503-

>ASPNIDRAFT_54156-T1 ID=ASPNIDRAFT_54156-T1|Name=ASPNIDRAFT_54156-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=4968bp|location=Sequence derived from alignment at ACJE01000020.1:844302..846503- (Aspergillus niger ATCC 1015)
GAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCCAGCTGACA
TGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGAGGCATGGGC
GGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGGTATGGGAGGAAC
CCATATCAACATCGACCCCAGCGTGCTGTTCAACATGATGAACGGCGGCG
GCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGCGGATTT
CCCTTTTAGCTCTCGAGATTAGCCCCAACTCGTCCGTCTACCTGTCCAAC
CGGGCTGCAGCATACATGGCGGCCAACCAATATCTCGCTGCTCTGGAGGA
CTGCGAACGGGCCTGCGAGCTCGACCCCACCAACACTAAGATCATGTACC
GGTTGGCCCGTATCCTGACCAGCTTGGGCCGTCCGACGGAGGCTCTTGAC
GTGCTGTCTCGTATCGAGCCCCCGGCCTCCGCTACTGACCGTGCGGCCGC
AGAGAAGATGCTCCGCTTCGTCAGCCAGGCGGAGGAGGCTCTTTCGCAGG
ATCGTGGTGTCTCAATGGTGCTGTTCTGCCTCGACCAGGCCCGTCAGCTC
CTCGGACAAGGCGTCAAGGAGCCCCGCAAGTGGACGCTGATGACTGCAGA
GGCCCAGTTGAAGATGGGCAACGACAACTCGTACGGCAAGGCACAGGACA
TTGCTATCAGCATGCTCCGCGTGAACAGCCAGGACCCTGATGCGCTGATG
ATCCGCGCCCGGGCCTTCTACGGTATGGGTGACACGGAGCAGGCGCTGAA
GCTGCTGAAGATGTGTCTGGGTCTGGATCCCGATATGAAGGCGGCGATCA
AGCTGCTGCGGACTGTGCAGAAGCTGGTACGCACCAAGGAAGAGGGTAAC
ACGGCATTCAAGGCCAAGGACTACCGTCGCGCCATCGACCTGTGGGGTGA
GGCGCTGACGGTGGACCCGAAGAACAAGGACCAGAACGCCAAGATCCTGC
AGAACCGGGCGCAGGCATACATCAACCTGAAGGAGTACGACAGCGCAGTG
GCAGACTGCAACGAGGCCCTGCGGCTGGACCCCGGGTACCTCAAGGCGCA
GAAGATGCGCGCCAAGGCGCATGGCGGTGCCGGAAACTGGGAAGAAGCTG
TGCGCGACTACAAGGCGGTGGCGGAGTCGAACCCGACCGAGAAGGGCATC
CAAGAGGAAATCCGTCGGGCCGAGTTTGAGCTGAAGAAGGCGCAGCGCAA
GGATTACTACAAGATCCTCGGAGTGTCCAAGGACGCGGGCGAGCAAGAGA
TCAAGAAGGCGTACCGCAAGATGGCGATCCAGTACCACCCGGACAAGAAC
CGGGACGGGGATGCGGGTGACGAGAAGTTCAAGGAGATTGGTGAGGCGTA
CGAGACTTTGAGTGATCCTCAATGGCTGCTGCTCGCGATGATCTCCGGAG
CTCGATGGACGTTGACACCAACGATCCCCGCCTCGGCTCTCCCTCTGCCA
CCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCCGACCCCGCCCCCT
CACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCTTCAAGCTGGCAGG
AAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCCATTGAGGAATTCA
CCAAGGGAAACGTGCTGCCTACGACAACGGCGATGACCTGATGGACCCAG
CTGACATGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATGGGAGGC
ATGGGCGGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGGTATGGG
AGGAACCCATATCAACATCGACCCCAGCGTGCTGTTCAACATGATGAACG
GCGGCGGCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTCCCCGGC
GGATTTCCCTTTTAGCTCTCGAGATTAGCCCCAACTCGTCCGTCTACCTG
TCCAACCGGGCTGCAGCATACATGGCGGCCAACCAATATCTCGCTGCTCT
GGAGGACTGCGAACGGGCCTGCGAGCTCGACCCCACCAACACTAAGATCA
TGTACCGGTTGGCCCGTATCCTGACCAGCTTGGGCCGTCCGACGGAGGCT
CTTGACGTGCTGTCTCGTATCGAGCCCCCGGCCTCCGCTACTGACCGTGC
GGCCGCAGAGAAGATGCTCCGCTTCGTCAGCCAGGCGGAGGAGGCTCTTT
CGCAGGATCGTGGTGTCTCAATGGTGCTGTTCTGCCTCGACCAGGCCCGT
CAGCTCCTCGGACAAGGCGTCAAGGAGCCCCGCAAGTGGACGCTGATGAC
TGCAGAGGCCCAGTTGAAGATGGGCAACGACAACTCGTACGGCAAGGCAC
AGGACATTGCTATCAGCATGCTCCGCGTGAACAGCCAGGACCCTGATGCG
CTGATGATCCGCGCCCGGGCCTTCTACGGTATGGGTGACACGGAGCAGGC
GCTGAAGCTGCTGAAGATGTGTCTGGGTCTGGATCCCGATATGAAGGCGG
CGATCAAGCTGCTGCGGACTGTGCAGAAGCTGGTACGCACCAAGGAAGAG
GGTAACACGGCATTCAAGGCCAAGGACTACCGTCGCGCCATCGACCTGTG
GGGTGAGGCGCTGACGGTGGACCCGAAGAACAAGGACCAGAACGCCAAGA
TCCTGCAGAACCGGGCGCAGGCATACATCAACCTGAAGGAGTACGACAGC
GCAGTGGCAGACTGCAACGAGGCCCTGCGGCTGGACCCCGGGTACCTCAA
GGCGCAGAAGATGCGCGCCAAGGCGCATGGCGGTGCCGGAAACTGGGAAG
AAGCTGTGCGCGACTACAAGGCGGTGGCGGAGTCGAACCCGACCGAGAAG
GGCATCCAAGAGGAAATCCGTCGGGCCGAGTTTGAGCTGAAGAAGGCGCA
GCGCAAGGATTACTACAAGATCCTCGGAGTGTCCAAGGACGCGGGCGAGC
AAGAGATCAAGAAGGCGTACCGCAAGATGGCGATCCAGTACCACCCGGAC
AAGAACCGGGACGGGGATGCGGGTGACGAGAAGTTCAAGGAGATTGGTGA
GGCGTACGAGACTTTGAGTGATCCTCAATGGCTGCTGCTCGCGATGATCT
CCGGAGCTCGATGGACGTTGACACCAACGATCCCCGCCTCGGCTCTCCCT
CTGCCACCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCCGACCCCG
CCCCCTCACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCTTCAAGCT
GGCAGGAAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCCATTGAGG
AATTCACCAAGGGAAACGTGCTGCCTACGACAACGGCGATGACCTGATGG
ACCCAGCTGACATGTTCTCGCACGGCGGCTTCGGCGGCATGGGAGGCATG
GGAGGCATGGGCGGTATGGGCGGTATGGGAGGAATGGGTGGTATGGGTGG
TATGGGAGGAACCCATATCAACATCGACCCCAGCGTGCTGTTCAACATGA
TGAACGGCGGCGGCGGATTTGCGCACGCAGGAGGACAGCGCGGAGGATTC
CCCGGCGGATTTCCCTTTTAGCTCTCGAGATTAGCCCCAACTCGTCCGTC
TACCTGTCCAACCGGGCTGCAGCATACATGGCGGCCAACCAATATCTCGC
TGCTCTGGAGGACTGCGAACGGGCCTGCGAGCTCGACCCCACCAACACTA
AGATCATGTACCGGTTGGCCCGTATCCTGACCAGCTTGGGCCGTCCGACG
GAGGCTCTTGACGTGCTGTCTCGTATCGAGCCCCCGGCCTCCGCTACTGA
CCGTGCGGCCGCAGAGAAGATGCTCCGCTTCGTCAGCCAGGCGGAGGAGG
CTCTTTCGCAGGATCGTGGTGTCTCAATGGTGCTGTTCTGCCTCGACCAG
GCCCGTCAGCTCCTCGGACAAGGCGTCAAGGAGCCCCGCAAGTGGACGCT
GATGACTGCAGAGGCCCAGTTGAAGATGGGCAACGACAACTCGTACGGCA
AGGCACAGGACATTGCTATCAGCATGCTCCGCGTGAACAGCCAGGACCCT
GATGCGCTGATGATCCGCGCCCGGGCCTTCTACGGTATGGGTGACACGGA
GCAGGCGCTGAAGCTGCTGAAGATGTGTCTGGGTCTGGATCCCGATATGA
AGGCGGCGATCAAGCTGCTGCGGACTGTGCAGAAGCTGGTACGCACCAAG
GAAGAGGGTAACACGGCATTCAAGGCCAAGGACTACCGTCGCGCCATCGA
CCTGTGGGGTGAGGCGCTGACGGTGGACCCGAAGAACAAGGACCAGAACG
CCAAGATCCTGCAGAACCGGGCGCAGGCATACATCAACCTGAAGGAGTAC
GACAGCGCAGTGGCAGACTGCAACGAGGCCCTGCGGCTGGACCCCGGGTA
CCTCAAGGCGCAGAAGATGCGCGCCAAGGCGCATGGCGGTGCCGGAAACT
GGGAAGAAGCTGTGCGCGACTACAAGGCGGTGGCGGAGTCGAACCCGACC
GAGAAGGGCATCCAAGAGGAAATCCGTCGGGCCGAGTTTGAGCTGAAGAA
GGCGCAGCGCAAGGATTACTACAAGATCCTCGGAGTGTCCAAGGACGCGG
GCGAGCAAGAGATCAAGAAGGCGTACCGCAAGATGGCGATCCAGTACCAC
CCGGACAAGAACCGGGACGGGGATGCGGGTGACGAGAAGTTCAAGGAGAT
TGGTGAGGCGTACGAGACTTTGAGTGATCCTCAATGGCTGCTGCTCGCGA
TGATCTCCGGAGCTCGATGGACGTTGACACCAACGATCCCCGCCTCGGCT
CTCCCTCTGCCACCAACGGTGTGAATGGCACTCACACGGAGAAGAGTCCG
ACCCCGCCCCCTCACCGGTCCAATGGAAACACCGCCGAGGCCGACTCCTT
CAAGCTGGCAGGAAACAAGTTTTTCAAGGATGGCAACTATGCCCGCGCCA
TTGAGGAATTCACCAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54156ASPNIDRAFT_54156Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54156-T1ASPNIDRAFT_54156-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54156-T1.cdsASPNIDRAFT_54156-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54156-T1.exon3ASPNIDRAFT_54156-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54156-T1.exon2ASPNIDRAFT_54156-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54156-T1.exon1ASPNIDRAFT_54156-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54156-T1.utr5p1ASPNIDRAFT_54156-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR018253
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR001440
DBxrefInterPro:IPR036869
DBxrefInterPro:IPR019734
DBxrefInterPro:IPR001623
DBxrefPFAM:PF13181
DBxrefPFAM:PF13174
DBxrefPFAM:PF07719
DBxrefPFAM:PF14559
DBxrefPFAM:PF13432
DBxrefPFAM:PF00515
DBxrefPFAM:PF00226
DBxrefPFAM:PF12895
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:844302..846503 -
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