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ASPNIDRAFT_54218-T1, ASPNIDRAFT_54218-T1 (mRNA) Aspergillus niger ATCC 1015

Overview
NameASPNIDRAFT_54218-T1
Unique NameASPNIDRAFT_54218-T1
TypemRNA
OrganismAspergillus niger ATCC 1015
Sequences
The following sequences are available for this feature:

mRNA from alignment at ACJE01000020.1:1308393..1309341-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>ASPNIDRAFT_54218-T1 ID=ASPNIDRAFT_54218-T1|Name=ASPNIDRAFT_54218-T1|organism=Aspergillus niger ATCC 1015|type=mRNA|length=949bp|location=Sequence derived from alignment at ACJE01000020.1:1308393..1309341- (Aspergillus niger ATCC 1015)
GCCAATTGACCTCCCCCCTCGTCATCCCCGCTCTTTCGCGCGCTTCCTCG
ACTTCCGCGATGGCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTC
TCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAA
ACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAA
CCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTC
TTCTCTCGACAAGGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCG
GCATGTACGTCGTGCTGGAGCAGTTCTTCAGACCTCCGTAAGTCGCCCCA
TCCAGCTTCGAGTCAGGTCTGCCTCGGTGCATATCATCATCAGGATTTCA
AGGGGGCCATCTGAGCCTGTCTATCGCTTTTCATCAGTCTATGGAGGATT
GTTCTGTCTCAATGGATCTGCGGCTGATGAGCTGGTCGTCTAGTTACACT
ATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGA
ACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCA
AGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAG
GAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACGATATCGACATGAC
CAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTA
TTGTTGAGAGTGAGTAACCAGTAAATTCATGTGTAGGTCATGAGACTCCT
ACTAACGATATTACGTAGCTTCCAACGCCGAATATGCCACCGAGACCCGT
GAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTGACAAGTG
GGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTACCGCTAA
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Coding sequence (CDS) from alignment at ACJE01000020.1:1308393..1309341-

>ASPNIDRAFT_54218-T1 ID=ASPNIDRAFT_54218-T1|Name=ASPNIDRAFT_54218-T1|organism=Aspergillus niger ATCC 1015|type=CDS|length=2025bp|location=Sequence derived from alignment at ACJE01000020.1:1308393..1309341- (Aspergillus niger ATCC 1015)
CTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAAC
AAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGC
TGCTATCAGAGCCGATGCTCCTTACCGCTAATTACACTATCTTCTACCCC
TTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCG
TCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGG
CTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGAT
GGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTA
CTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGAATG
GCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTACAGC
CTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTTCCT
CGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTCCGT
CTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGACAA
GGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACGTCG
TGCTGGAGCAGTTCTTCAGACCTCCCTTCCAACGCCGAATATGCCACCGA
GACCCGTGAGGAGCTGCTGTACAACAAGGAGAAGCTCCTTGCCAACGGTG
ACAAGTGGGAGCCCGAAATTGCTGCTGCTATCAGAGCCGATGCTCCTTAC
CGCTAATTACACTATCTTCTACCCCTTCGAGAAGGGACCCATCTCCCCCC
GTTTCCGTGGTGAACACGCTCTGCGTCGCTACCCCACCGGTGAAGAGCGT
TGCATTGCCTGCAAGCTCTGTGAGGCTATCTGCCCGGCTCAGGCTATCAC
CATCGAGGCTGAGGAGCGTGAGGATGGAAGCCGTCGCACGACGCGTTACG
ATATCGACATGACCAAGTGCATCTACTGCGGTTACTGCCAGGAGAGTTGC
CCTGTCGACGCTATTGTTGAGAATGGCCGCCCCCAAGTCCGTCGCCAGGC
TCGTCGCCTACTCTCGTCCTACAGCCTTCCCTCTCCGCTCTTCGCCCTTG
GGATCCATCGCAAACTTCTCTTCCTCGGTGAACCGGGCAGCTACGCCAGC
TGGTCCCCCCCAACCGGGCTTCCGTCTGCCCCCTCCGAAGAAATGGGACG
AAGGTGCTGAGTCTTCTCTCGACAAGGCCGGAAAGTACTTCCTTATGGCT
GAGTTGTTGCGCGGCATGTACGTCGTGCTGGAGCAGTTCTTCAGACCTCC
CTTCCAACGCCGAATATGCCACCGAGACCCGTGAGGAGCTGCTGTACAAC
AAGGAGAAGCTCCTTGCCAACGGTGACAAGTGGGAGCCCGAAATTGCTGC
TGCTATCAGAGCCGATGCTCCTTACCGCTAATTACACTATCTTCTACCCC
TTCGAGAAGGGACCCATCTCCCCCCGTTTCCGTGGTGAACACGCTCTGCG
TCGCTACCCCACCGGTGAAGAGCGTTGCATTGCCTGCAAGCTCTGTGAGG
CTATCTGCCCGGCTCAGGCTATCACCATCGAGGCTGAGGAGCGTGAGGAT
GGAAGCCGTCGCACGACGCGTTACGATATCGACATGACCAAGTGCATCTA
CTGCGGTTACTGCCAGGAGAGTTGCCCTGTCGACGCTATTGTTGAGAATG
GCCGCCCCCAAGTCCGTCGCCAGGCTCGTCGCCTACTCTCGTCCTACAGC
CTTCCCTCTCCGCTCTTCGCCCTTGGGATCCATCGCAAACTTCTCTTCCT
CGGTGAACCGGGCAGCTACGCCAGCTGGTCCCCCCCAACCGGGCTTCCGT
CTGCCCCCTCCGAAGAAATGGGACGAAGGTGCTGAGTCTTCTCTCGACAA
GGCCGGAAAGTACTTCCTTATGGCTGAGTTGTTGCGCGGCATGTACGTCG
TGCTGGAGCAGTTCTTCAGACCTCC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Vocabulary: Molecular Function
TermDefinition
GO:0016651oxidoreductase activity, acting on NAD(P)H
GO:00515394 iron, 4 sulfur cluster binding
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54218ASPNIDRAFT_54218Aspergillus niger ATCC 1015gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54218-T1ASPNIDRAFT_54218-T1-proteinAspergillus niger ATCC 1015polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54218-T1.cdsASPNIDRAFT_54218-T1.cdsAspergillus niger ATCC 1015CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54218-T1.exon3ASPNIDRAFT_54218-T1.exon3Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54218-T1.exon2ASPNIDRAFT_54218-T1.exon2Aspergillus niger ATCC 1015exon
ASPNIDRAFT_54218-T1.exon1ASPNIDRAFT_54218-T1.exon1Aspergillus niger ATCC 1015exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
ASPNIDRAFT_54218-T1.utr5p1ASPNIDRAFT_54218-T1.utr5p1Aspergillus niger ATCC 1015five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR017900
DBxrefInterPro:IPR010226
DBxrefInterPro:IPR017896
DBxrefPFAM:PF13187
DBxrefPFAM:PF12838
DBxrefPFAM:PF12800
DBxrefPFAM:PF13237
DBxrefPFAM:PF00037
ProductNADH-ubiquinone oxidoreductase 23 kDa subunit mitochondrial precursor
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger ATCC 1015 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ACJE01000020.1supercontigACJE01000020.1:1308393..1309341 -
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